RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ADAMTS8Q9UP79 889 aa13.97□□□□□ -0.17
CCDC170-201ENST00000239374 EFCAB5A4FU69 1503 aa13.97□□□□□ -0.17
CCDC170-201ENST00000239374 SKAP1Q86WV1 359 aa13.97□□□□□ -0.17
CCDC170-201ENST00000239374 TPRNQ4KMQ1 711 aa13.96□□□□□ -0.17
CCDC170-201ENST00000239374 DNTTIP2Q5QJE6 756 aaKnown RBP13.96□□□□□ -0.17
CCDC170-201ENST00000239374 CARMIL2Q6F5E8 1435 aa13.96□□□□□ -0.17
CCDC170-201ENST00000239374 CGNL1Q0VF96 1302 aa13.96□□□□□ -0.17
CCDC170-201ENST00000239374 GBP4Q96PP9 640 aa13.96□□□□□ -0.17
CCDC170-201ENST00000239374 E9PSI1 815 aa13.96□□□□□ -0.18
CCDC170-201ENST00000239374 NCOA1Q15788 1441 aa13.95□□□□□ -0.18
CCDC170-201ENST00000239374 MSNP26038 577 aaKnown RBP13.95□□□□□ -0.18
CCDC170-201ENST00000239374 MIA2Q96PC5 1412 aa13.93□□□□□ -0.18
CCDC170-201ENST00000239374 CASC1Q6TDU7 716 aa13.93□□□□□ -0.18
CCDC170-201ENST00000239374 SMC4Q9NTJ3 1288 aa13.93□□□□□ -0.18
CCDC170-201ENST00000239374 ANKRD50Q9ULJ7 1429 aa13.93□□□□□ -0.18
CCDC170-201ENST00000239374 PRKCSHP14314 528 aaPredicted RBP13.93□□□□□ -0.18
CCDC170-201ENST00000239374 SAFB2Q14151 953 aaKnown RBP eCLIP13.92□□□□□ -0.18
CCDC170-201ENST00000239374 FOXD4L1Q9NU39 408 aa13.92□□□□□ -0.18
CCDC170-201ENST00000239374 EHBP1L1Q8N3D4 1523 aa13.92□□□□□ -0.18
CCDC170-201ENST00000239374 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
CCDC170-201ENST00000239374 NPM1P06748 294 aaKnown RBP eCLIP13.91□□□□□ -0.18
CCDC170-201ENST00000239374 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
CCDC170-201ENST00000239374 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.18
CCDC170-201ENST00000239374 IPO8O15397 1037 aaKnown RBP13.9□□□□□ -0.18
CCDC170-201ENST00000239374 JPH4Q96JJ6 628 aa13.9□□□□□ -0.18
CCDC170-201ENST00000239374 RSPH4AQ5TD94 716 aa13.9□□□□□ -0.18
CCDC170-201ENST00000239374 HSP90AA2PQ14568 343 aaPredicted RBP13.89□□□□□ -0.19
CCDC170-201ENST00000239374 PANK1Q8TE04 598 aa13.89□□□□□ -0.19
CCDC170-201ENST00000239374 PTPRKQ15262 1439 aa13.89□□□□□ -0.19
CCDC170-201ENST00000239374 KIAA1107Q9UPP5 1409 aa13.89□□□□□ -0.19
CCDC170-201ENST00000239374 KANK1Q14678 1352 aa13.88□□□□□ -0.19
CCDC170-201ENST00000239374 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
CCDC170-201ENST00000239374 PLCB2Q00722 1185 aa13.88□□□□□ -0.19
CCDC170-201ENST00000239374 SRPK2P78362 688 aaKnown RBP13.87□□□□□ -0.19
CCDC170-201ENST00000239374 POGKQ9P215 609 aa13.87□□□□□ -0.19
CCDC170-201ENST00000239374 PTPN23Q9H3S7 1636 aa13.87□□□□□ -0.19
CCDC170-201ENST00000239374 BICRAQ9NZM4 1560 aa13.87□□□□□ -0.19
CCDC170-201ENST00000239374 PEG3Q9GZU2 1588 aa13.87□□□□□ -0.19
CCDC170-201ENST00000239374 BIVM-ERCC5R4GMW8 1640 aa13.87□□□□□ -0.19
CCDC170-201ENST00000239374 DDX11L8A8MPP1 907 aa13.86□□□□□ -0.19
CCDC170-201ENST00000239374 SUPT6HQ7KZ85 1726 aaKnown RBP13.86□□□□□ -0.19
CCDC170-201ENST00000239374 APBB1O00213 710 aa13.86□□□□□ -0.19
CCDC170-201ENST00000239374 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
CCDC170-201ENST00000239374 AQRO60306 1485 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC170-201ENST00000239374 VSIG10Q8N0Z9 540 aa13.85□□□□□ -0.19
CCDC170-201ENST00000239374 DAPK1P53355 1430 aa13.85□□□□□ -0.19
CCDC170-201ENST00000239374 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
CCDC170-201ENST00000239374 ARID3AQ99856 593 aa13.85□□□□□ -0.19
CCDC170-201ENST00000239374 BCAR3O75815 825 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 EFCAB2Q5VUJ9 269 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
CCDC170-201ENST00000239374 ZBTB7CA1YPR0 619 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 PTMSP20962 102 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 CHMP5Q9NZZ3 219 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 HMGXB3Q12766 1538 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 ZKSCAN2Q63HK3 967 aa13.84□□□□□ -0.19
CCDC170-201ENST00000239374 WASHC2CQ9Y4E1 1318 aa13.83□□□□□ -0.2
CCDC170-201ENST00000239374 ERCC6Q03468 1493 aa13.82□□□□□ -0.2
CCDC170-201ENST00000239374 KIF3BO15066 747 aa13.82□□□□□ -0.2
CCDC170-201ENST00000239374 STK26Q9P289 416 aa13.82□□□□□ -0.2
CCDC170-201ENST00000239374 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
CCDC170-201ENST00000239374 FAM43AQ8N2R8 423 aa13.81□□□□□ -0.2
CCDC170-201ENST00000239374 RPRD2Q5VT52 1461 aaKnown RBP13.81□□□□□ -0.2
CCDC170-201ENST00000239374 CALD1Q05682 793 aaKnown RBP13.81□□□□□ -0.2
CCDC170-201ENST00000239374 ESF1Q9H501 851 aaKnown RBP13.81□□□□□ -0.2
CCDC170-201ENST00000239374 NGEFQ8N5V2 710 aa13.8□□□□□ -0.2
CCDC170-201ENST00000239374 TOPBP1Q92547 1522 aa13.8□□□□□ -0.2
CCDC170-201ENST00000239374 C22orf23Q9BZE7 217 aa13.8□□□□□ -0.2
CCDC170-201ENST00000239374 PRDM2Q13029 1718 aa13.8□□□□□ -0.2
CCDC170-201ENST00000239374 CDK13Q14004 1512 aaKnown RBP13.79□□□□□ -0.2
CCDC170-201ENST00000239374 GGT6Q6P531 493 aa13.79□□□□□ -0.2
CCDC170-201ENST00000239374 DDX49Q9Y6V7 483 aaKnown RBP13.79□□□□□ -0.2
CCDC170-201ENST00000239374 ROCK1Q13464 1354 aa13.79□□□□□ -0.2
CCDC170-201ENST00000239374 DZIP1LQ8IYY4 767 aaKnown RBP13.78□□□□□ -0.2
CCDC170-201ENST00000239374 SPAG9O60271 1321 aaKnown RBP13.78□□□□□ -0.2
CCDC170-201ENST00000239374 ANKRD45Q5TZF3 282 aa13.77□□□□□ -0.2
CCDC170-201ENST00000239374 EPRSP07814 1512 aaKnown RBP13.77□□□□□ -0.2
CCDC170-201ENST00000239374 PRG4Q92954 1404 aaPredicted RBP13.77□□□□□ -0.2
CCDC170-201ENST00000239374 NESP48681 1621 aa13.77□□□□□ -0.21
CCDC170-201ENST00000239374 TRAK2O60296 914 aa13.77□□□□□ -0.21
CCDC170-201ENST00000239374 PDZRN3Q9UPQ7 1066 aa13.77□□□□□ -0.21
CCDC170-201ENST00000239374 CFAP44Q96MT7 982 aa13.76□□□□□ -0.21
CCDC170-201ENST00000239374 PDE3AQ14432 1141 aa13.76□□□□□ -0.21
CCDC170-201ENST00000239374 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
CCDC170-201ENST00000239374 ABCC5O15440 1437 aa13.75□□□□□ -0.21
CCDC170-201ENST00000239374 SKOR2Q2VWA4 1001 aaPredicted RBP13.75□□□□□ -0.21
CCDC170-201ENST00000239374 NUTM2DQ5VT03 806 aaPredicted RBP13.75□□□□□ -0.21
CCDC170-201ENST00000239374 MRE11P49959 708 aa13.75□□□□□ -0.21
CCDC170-201ENST00000239374 ELL2O00472 640 aaPredicted RBP13.75□□□□□ -0.21
CCDC170-201ENST00000239374 DDX19BQ9UMR2 479 aa13.75□□□□□ -0.21
CCDC170-201ENST00000239374 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
CCDC170-201ENST00000239374 LNPKQ9C0E8 428 aa13.74□□□□□ -0.21
CCDC170-201ENST00000239374 HECW1Q76N89 1606 aa13.74□□□□□ -0.21
CCDC170-201ENST00000239374 TCP11L2Q8N4U5 519 aa13.74□□□□□ -0.21
CCDC170-201ENST00000239374 FOXD4L5Q5VV16 416 aaPredicted RBP13.73□□□□□ -0.21
CCDC170-201ENST00000239374 FOXD4L4Q8WXT5 416 aaPredicted RBP13.73□□□□□ -0.21
CCDC170-201ENST00000239374 MCCP23508 829 aa13.73□□□□□ -0.21
CCDC170-201ENST00000239374 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
CCDC170-201ENST00000239374 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
CCDC170-201ENST00000239374 C9orf84Q5VXU9 1444 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms