RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 SPATA31E1Q6ZUB1 1445 aa32.63■■■□□ 2.81
MSX2-201ENST00000239243 PLA2R1Q13018 1463 aa32.61■■■□□ 2.81
MSX2-201ENST00000239243 RALGAPBQ86X10 1494 aa32.61■■■□□ 2.81
MSX2-201ENST00000239243 ANP32CO43423 234 aa32.61■■■□□ 2.81
MSX2-201ENST00000239243 WASHC2AQ641Q2 1341 aa32.6■■■□□ 2.81
MSX2-201ENST00000239243 DHX29Q7Z478 1369 aaKnown RBP32.57■■■□□ 2.8
MSX2-201ENST00000239243 POLR1AO95602 1720 aaPredicted RBP32.57■■■□□ 2.8
MSX2-201ENST00000239243 MYT1LQ9UL68 1186 aa32.57■■■□□ 2.8
MSX2-201ENST00000239243 ZNF326Q5BKZ1 582 aaKnown RBP32.56■■■□□ 2.8
MSX2-201ENST00000239243 KANK1Q14678 1352 aa32.55■■■□□ 2.8
MSX2-201ENST00000239243 KIDINS220Q9ULH0 1771 aa32.55■■■□□ 2.8
MSX2-201ENST00000239243 KDM5CP41229 1560 aa32.54■■■□□ 2.8
MSX2-201ENST00000239243 NEO1Q92859 1461 aa32.53■■■□□ 2.8
MSX2-201ENST00000239243 POGZQ7Z3K3 1410 aa32.53■■■□□ 2.8
MSX2-201ENST00000239243 SCAF1Q9H7N4 1312 aaKnown RBP32.53■■■□□ 2.8
MSX2-201ENST00000239243 CCER2I3L3R5 266 aa32.52■■■□□ 2.8
MSX2-201ENST00000239243 DCAF11Q8TEB1 546 aa32.52■■■□□ 2.8
MSX2-201ENST00000239243 CCDC7Q96M83 1385 aa32.51■■■□□ 2.8
MSX2-201ENST00000239243 VWDEQ8N2E2 1590 aa32.51■■■□□ 2.8
MSX2-201ENST00000239243 TET3O43151 1660 aa32.51■■■□□ 2.8
MSX2-201ENST00000239243 E9PCH4 1651 aa32.5■■■□□ 2.79
MSX2-201ENST00000239243 USP47Q96K76 1375 aa32.5■■■□□ 2.79
MSX2-201ENST00000239243 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
MSX2-201ENST00000239243 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
MSX2-201ENST00000239243 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
MSX2-201ENST00000239243 PRDM15P57071 1507 aaPredicted RBP32.5■■■□□ 2.79
MSX2-201ENST00000239243 MLH3Q9UHC1 1453 aa32.47■■■□□ 2.79
MSX2-201ENST00000239243 CNTLNQ9NXG0 1405 aa32.45■■■□□ 2.79
MSX2-201ENST00000239243 KDM2AQ9Y2K7 1162 aa32.45■■■□□ 2.79
MSX2-201ENST00000239243 HECW2Q9P2P5 1572 aa32.45■■■□□ 2.79
MSX2-201ENST00000239243 KIF3BO15066 747 aa32.45■■■□□ 2.78
MSX2-201ENST00000239243 TRPM2O94759 1503 aa32.44■■■□□ 2.78
MSX2-201ENST00000239243 CYB5RLQ6IPT4 315 aa32.43■■■□□ 2.78
MSX2-201ENST00000239243 PRAG1Q86YV5 1406 aa32.43■■■□□ 2.78
MSX2-201ENST00000239243 SPHKAPQ2M3C7 1700 aa32.43■■■□□ 2.78
MSX2-201ENST00000239243 A2MP01023 1474 aa32.42■■■□□ 2.78
MSX2-201ENST00000239243 MAP3K4Q9Y6R4 1608 aa32.42■■■□□ 2.78
MSX2-201ENST00000239243 MROH1Q8NDA8 1641 aa32.42■■■□□ 2.78
MSX2-201ENST00000239243 GLI2P10070 1586 aa32.42■■■□□ 2.78
MSX2-201ENST00000239243 CARD11Q9BXL7 1154 aa32.41■■■□□ 2.78
MSX2-201ENST00000239243 PTPRTO14522 1441 aa32.41■■■□□ 2.78
MSX2-201ENST00000239243 C11orf95C9JLR9 678 aaPredicted RBP32.4■■■□□ 2.78
MSX2-201ENST00000239243 TRPM1Q7Z4N2 1603 aa32.39■■■□□ 2.78
MSX2-201ENST00000239243 ARID4BQ4LE39 1312 aaPredicted RBP32.39■■■□□ 2.78
MSX2-201ENST00000239243 KIF7Q2M1P5 1343 aa32.38■■■□□ 2.77
MSX2-201ENST00000239243 RNF17Q9BXT8 1623 aaKnown RBP32.37■■■□□ 2.77
MSX2-201ENST00000239243 RGL3Q3MIN7 710 aa32.37■■■□□ 2.77
MSX2-201ENST00000239243 ROCK2O75116 1388 aaKnown RBP32.35■■■□□ 2.77
MSX2-201ENST00000239243 CEP152O94986 1710 aa32.35■■■□□ 2.77
MSX2-201ENST00000239243 LMTK2Q8IWU2 1503 aa32.33■■■□□ 2.77
MSX2-201ENST00000239243 BCORL1Q5H9F3 1711 aa32.33■■■□□ 2.77
MSX2-201ENST00000239243 LAMC1P11047 1609 aa32.32■■■□□ 2.76
MSX2-201ENST00000239243 GTF3C3Q9Y5Q9 886 aa32.3■■■□□ 2.76
MSX2-201ENST00000239243 EFCAB6Q5THR3 1501 aa32.3■■■□□ 2.76
MSX2-201ENST00000239243 GPRASP1Q5JY77 1395 aa32.29■■■□□ 2.76
MSX2-201ENST00000239243 ABCA6Q8N139 1617 aa32.29■■■□□ 2.76
MSX2-201ENST00000239243 FRMPD1Q5SYB0 1578 aa32.29■■■□□ 2.76
MSX2-201ENST00000239243 STAC3Q96MF2 364 aa32.28■■■□□ 2.76
MSX2-201ENST00000239243 CLTCL1P53675 1640 aa32.28■■■□□ 2.76
MSX2-201ENST00000239243 NEURL4Q96JN8 1562 aa32.28■■■□□ 2.76
MSX2-201ENST00000239243 RICTORQ6R327 1708 aa32.25■■■□□ 2.75
MSX2-201ENST00000239243 DIP2BQ9P265 1576 aa32.22■■■□□ 2.75
MSX2-201ENST00000239243 PPRC1Q5VV67 1664 aaKnown RBP32.22■■■□□ 2.75
MSX2-201ENST00000239243 DIP2CQ9Y2E4 1556 aa32.19■■■□□ 2.74
MSX2-201ENST00000239243 RAPGEF3O95398 923 aa32.19■■■□□ 2.74
MSX2-201ENST00000239243 ST20-MTHFSA0A0A6YYL1 179 aa32.18■■■□□ 2.74
MSX2-201ENST00000239243 MADDQ8WXG6 1647 aa32.16■■■□□ 2.74
MSX2-201ENST00000239243 FAM69CQ0P6D2 419 aa32.13■■■□□ 2.73
MSX2-201ENST00000239243 NBPF1Q3BBV0 1214 aa32.12■■■□□ 2.73
MSX2-201ENST00000239243 PRKRIP1Q9H875 184 aaPredicted RBP32.12■■■□□ 2.73
MSX2-201ENST00000239243 KIF1BO60333 1816 aa32.12■■■□□ 2.73
MSX2-201ENST00000239243 GGT6Q6P531 493 aa32.09■■■□□ 2.73
MSX2-201ENST00000239243 ZMYM4Q5VZL5 1548 aa32.09■■■□□ 2.73
MSX2-201ENST00000239243 ABCC3O15438 1527 aa32.08■■■□□ 2.73
MSX2-201ENST00000239243 POLR3GLQ9BT43 218 aa32.07■■■□□ 2.72
MSX2-201ENST00000239243 NPATQ14207 1427 aa32.05■■■□□ 2.72
MSX2-201ENST00000239243 WASHC2CQ9Y4E1 1318 aa32.04■■■□□ 2.72
MSX2-201ENST00000239243 MYOM2P54296 1465 aa32.04■■■□□ 2.72
MSX2-201ENST00000239243 ZC3H13Q5T200 1668 aaKnown RBP32.04■■■□□ 2.72
MSX2-201ENST00000239243 KIAA1210Q9ULL0 1709 aa32.04■■■□□ 2.72
MSX2-201ENST00000239243 UGGT1Q9NYU2 1555 aa32.03■■■□□ 2.72
MSX2-201ENST00000239243 CAMSAP1Q5T5Y3 1602 aa32.03■■■□□ 2.72
MSX2-201ENST00000239243 YEATS2Q9ULM3 1422 aa32■■■□□ 2.71
MSX2-201ENST00000239243 COL17A1Q9UMD9 1497 aaPredicted RBP31.98■■■□□ 2.71
MSX2-201ENST00000239243 IFT172Q9UG01 1749 aa31.98■■■□□ 2.71
MSX2-201ENST00000239243 IQGAP1P46940 1657 aa31.98■■■□□ 2.71
MSX2-201ENST00000239243 ADGRB3O60242 1522 aa31.97■■■□□ 2.71
MSX2-201ENST00000239243 TSPOAP1O95153 1857 aa31.97■■■□□ 2.71
MSX2-201ENST00000239243 MROH2AA6NES4 1674 aa31.95■■■□□ 2.71
MSX2-201ENST00000239243 ARHGAP31Q2M1Z3 1444 aa31.94■■■□□ 2.7
MSX2-201ENST00000239243 TESK2Q96S53 571 aa31.94■■■□□ 2.7
MSX2-201ENST00000239243 SCAF11Q99590 1463 aaKnown RBP31.93■■■□□ 2.7
MSX2-201ENST00000239243 NOS1P29475 1434 aa31.91■■■□□ 2.7
MSX2-201ENST00000239243 TMF1P82094 1093 aa31.91■■■□□ 2.7
MSX2-201ENST00000239243 REREQ9P2R6 1566 aa31.9■■■□□ 2.7
MSX2-201ENST00000239243 KTN1Q86UP2 1357 aaKnown RBP31.89■■■□□ 2.7
MSX2-201ENST00000239243 NRXN1Q9ULB1 1477 aa31.88■■■□□ 2.69
MSX2-201ENST00000239243 MRS2Q9HD23 443 aa31.88■■■□□ 2.69
MSX2-201ENST00000239243 EIF3AQ14152 1382 aaKnown RBP31.88■■■□□ 2.69
MSX2-201ENST00000239243 CFAP65Q6ZU64 1925 aaKnown RBP31.86■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms