RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 IFT57Q9NWB7 429 aa14.4□□□□□ -0.1
PCDH12-201ENST00000231484 FRAT2O75474 233 aaPredicted RBP14.4□□□□□ -0.1
PCDH12-201ENST00000231484 RAB3GAP2Q9H2M9 1393 aa14.4□□□□□ -0.1
PCDH12-201ENST00000231484 UQCRHLA0A096LP55 91 aa14.39□□□□□ -0.11
PCDH12-201ENST00000231484 UQCRHP07919 91 aa14.39□□□□□ -0.11
PCDH12-201ENST00000231484 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
PCDH12-201ENST00000231484 HOMER1Q86YM7 354 aa14.39□□□□□ -0.11
PCDH12-201ENST00000231484 MORC1Q86VD1 984 aa14.39□□□□□ -0.11
PCDH12-201ENST00000231484 PLEKHD1A6NEE1 506 aa14.38□□□□□ -0.11
PCDH12-201ENST00000231484 MNS1Q8NEH6 495 aa14.38□□□□□ -0.11
PCDH12-201ENST00000231484 POGKQ9P215 609 aa14.38□□□□□ -0.11
PCDH12-201ENST00000231484 PLIN1O60240 522 aa14.38□□□□□ -0.11
PCDH12-201ENST00000231484 SMC4Q9NTJ3 1288 aa14.38□□□□□ -0.11
PCDH12-201ENST00000231484 NLRP13Q86W25 1043 aa14.37□□□□□ -0.11
PCDH12-201ENST00000231484 HSP90B2PQ58FF3 399 aa14.37□□□□□ -0.11
PCDH12-201ENST00000231484 CFDP1Q9UEE9 299 aaPredicted RBP14.37□□□□□ -0.11
PCDH12-201ENST00000231484 NUCB2P80303 420 aa14.37□□□□□ -0.11
PCDH12-201ENST00000231484 DCAF11Q8TEB1 546 aa14.37□□□□□ -0.11
PCDH12-201ENST00000231484 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
PCDH12-201ENST00000231484 TRIM6-TRIM34B2RNG4 842 aa14.36□□□□□ -0.11
PCDH12-201ENST00000231484 MCTP1Q6DN14 999 aa14.36□□□□□ -0.11
PCDH12-201ENST00000231484 ISY1Q9ULR0 285 aaKnown RBP14.36□□□□□ -0.11
PCDH12-201ENST00000231484 AK7Q96M32 723 aa14.36□□□□□ -0.11
PCDH12-201ENST00000231484 H0YHG0 523 aa14.35□□□□□ -0.11
PCDH12-201ENST00000231484 LEKR1Q6ZMV7 388 aa14.35□□□□□ -0.11
PCDH12-201ENST00000231484 CLUAP1Q96AJ1 413 aa14.35□□□□□ -0.11
PCDH12-201ENST00000231484 ROCK2O75116 1388 aaKnown RBP14.35□□□□□ -0.11
PCDH12-201ENST00000231484 VPS8Q8N3P4 1428 aa14.35□□□□□ -0.11
PCDH12-201ENST00000231484 PDCL3Q9H2J4 239 aa14.34□□□□□ -0.11
PCDH12-201ENST00000231484 ESPNB1AK53 854 aa14.34□□□□□ -0.11
PCDH12-201ENST00000231484 FOXD4L6Q3SYB3 417 aaPredicted RBP14.34□□□□□ -0.11
PCDH12-201ENST00000231484 FOXD4L3Q6VB84 417 aaPredicted RBP14.34□□□□□ -0.11
PCDH12-201ENST00000231484 CGNL1Q0VF96 1302 aa14.33□□□□□ -0.11
PCDH12-201ENST00000231484 SAFB2Q14151 953 aaKnown RBP eCLIP14.33□□□□□ -0.12
PCDH12-201ENST00000231484 HMMRO75330 724 aa14.33□□□□□ -0.12
PCDH12-201ENST00000231484 CLSTN1O94985 981 aa14.33□□□□□ -0.12
PCDH12-201ENST00000231484 MYBBP1AQ9BQG0 1328 aaKnown RBP14.33□□□□□ -0.12
PCDH12-201ENST00000231484 TSPYL1Q9H0U9 437 aa14.33□□□□□ -0.12
PCDH12-201ENST00000231484 KIF15Q9NS87 1388 aa14.33□□□□□ -0.12
PCDH12-201ENST00000231484 MSH5O43196 834 aa14.32□□□□□ -0.12
PCDH12-201ENST00000231484 TPM1P09493 284 aa14.32□□□□□ -0.12
PCDH12-201ENST00000231484 GRPEL1Q9HAV7 217 aa14.32□□□□□ -0.12
PCDH12-201ENST00000231484 KIF3AQ9Y496 699 aa14.32□□□□□ -0.12
PCDH12-201ENST00000231484 SF3A1Q15459 793 aaKnown RBP14.32□□□□□ -0.12
PCDH12-201ENST00000231484 TPD52L1Q16890 204 aaPredicted RBP14.31□□□□□ -0.12
PCDH12-201ENST00000231484 TSR1Q2NL82 804 aaKnown RBP14.31□□□□□ -0.12
PCDH12-201ENST00000231484 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
PCDH12-201ENST00000231484 RUFY1Q96T51 708 aa14.31□□□□□ -0.12
PCDH12-201ENST00000231484 TAF7LQ5H9L4 462 aa14.31□□□□□ -0.12
PCDH12-201ENST00000231484 MAPK8IP2Q13387 824 aaPredicted RBP14.3□□□□□ -0.12
PCDH12-201ENST00000231484 RRP12Q5JTH9 1297 aaKnown RBP14.3□□□□□ -0.12
PCDH12-201ENST00000231484 CREBRFQ8IUR6 639 aa14.3□□□□□ -0.12
PCDH12-201ENST00000231484 CCDC191Q8NCU4 936 aa14.29□□□□□ -0.12
PCDH12-201ENST00000231484 GPATCH3Q96I76 525 aa14.29□□□□□ -0.12
PCDH12-201ENST00000231484 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
PCDH12-201ENST00000231484 DHX57Q6P158 1386 aaKnown RBP14.29□□□□□ -0.12
PCDH12-201ENST00000231484 WRNQ14191 1432 aaPredicted RBP eCLIP14.29□□□□□ -0.12
PCDH12-201ENST00000231484 DEF6Q9H4E7 631 aa14.29□□□□□ -0.12
PCDH12-201ENST00000231484 H3BQV1 296 aa14.29□□□□□ -0.12
PCDH12-201ENST00000231484 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
PCDH12-201ENST00000231484 ERCC4Q92889 916 aaPredicted RBP14.28□□□□□ -0.12
PCDH12-201ENST00000231484 PRDM10Q9NQV6 1147 aa14.28□□□□□ -0.12
PCDH12-201ENST00000231484 CDR1P51861 262 aa14.28□□□□□ -0.12
PCDH12-201ENST00000231484 CCDC146Q8IYE0 955 aa14.27□□□□□ -0.12
PCDH12-201ENST00000231484 HSP90AB3PQ58FF7 597 aa14.27□□□□□ -0.12
PCDH12-201ENST00000231484 BCL11BQ9C0K0 894 aaPredicted RBP14.27□□□□□ -0.12
PCDH12-201ENST00000231484 U2AF1L5P0DN76 240 aaPredicted RBP14.27□□□□□ -0.13
PCDH12-201ENST00000231484 U2AF1Q01081 240 aaKnown RBP eCLIP14.27□□□□□ -0.13
PCDH12-201ENST00000231484 RNF214Q8ND24 703 aa14.27□□□□□ -0.13
PCDH12-201ENST00000231484 FHAD1B1AJZ9 1412 aa14.27□□□□□ -0.13
PCDH12-201ENST00000231484 SASS6Q6UVJ0 657 aa14.26□□□□□ -0.13
PCDH12-201ENST00000231484 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
PCDH12-201ENST00000231484 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
PCDH12-201ENST00000231484 USP8P40818 1118 aa14.26□□□□□ -0.13
PCDH12-201ENST00000231484 CAVIN1Q6NZI2 390 aaKnown RBP14.26□□□□□ -0.13
PCDH12-201ENST00000231484 ARHGAP35Q9NRY4 1499 aa14.26□□□□□ -0.13
PCDH12-201ENST00000231484 LETM1O95202 739 aaPredicted RBP14.26□□□□□ -0.13
PCDH12-201ENST00000231484 AEBP1Q8IUX7 1158 aa14.25□□□□□ -0.13
PCDH12-201ENST00000231484 FOXD1Q16676 465 aa14.25□□□□□ -0.13
PCDH12-201ENST00000231484 REC8O95072 547 aa14.25□□□□□ -0.13
PCDH12-201ENST00000231484 SRPK2P78362 688 aaKnown RBP14.24□□□□□ -0.13
PCDH12-201ENST00000231484 DCTN1Q14203 1278 aa14.24□□□□□ -0.13
PCDH12-201ENST00000231484 E9PSI1 815 aa14.24□□□□□ -0.13
PCDH12-201ENST00000231484 PDCL2Q8N4E4 241 aa14.24□□□□□ -0.13
PCDH12-201ENST00000231484 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
PCDH12-201ENST00000231484 ERICH4A6NGS2 130 aa14.24□□□□□ -0.13
PCDH12-201ENST00000231484 MLECQ14165 292 aa14.24□□□□□ -0.13
PCDH12-201ENST00000231484 MBD3O95983 291 aa14.23□□□□□ -0.13
PCDH12-201ENST00000231484 ZSCAN30Q86W11 494 aa14.23□□□□□ -0.13
PCDH12-201ENST00000231484 FAM184AQ8NB25 1140 aa14.23□□□□□ -0.13
PCDH12-201ENST00000231484 BACH2Q9BYV9 841 aa14.23□□□□□ -0.13
PCDH12-201ENST00000231484 EIF4G1Q04637 1599 aaKnown RBP14.23□□□□□ -0.13
PCDH12-201ENST00000231484 PES1O00541 588 aaKnown RBP14.22□□□□□ -0.13
PCDH12-201ENST00000231484 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
PCDH12-201ENST00000231484 BICD2Q8TD16 824 aa14.22□□□□□ -0.13
PCDH12-201ENST00000231484 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
PCDH12-201ENST00000231484 IPO7O95373 1038 aaKnown RBP14.22□□□□□ -0.13
PCDH12-201ENST00000231484 ZHX1Q9UKY1 873 aaPredicted RBP14.22□□□□□ -0.13
PCDH12-201ENST00000231484 BBXQ8WY36 941 aaPredicted RBP14.21□□□□□ -0.13
PCDH12-201ENST00000231484 KIF27Q86VH2 1401 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms