RNA–Protein interactions for RNA: ENST00000228682.6

GLI1-201, Transcript of GLI family zinc finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GLI1, Length 3,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-201ENST00000228682 POLR3GLQ9BT43 218 aa11.76□□□□□ -0.53
GLI1-201ENST00000228682 ARHGEF5Q12774 1597 aa11.75□□□□□ -0.53
GLI1-201ENST00000228682 ARAP3Q8WWN8 1544 aa11.75□□□□□ -0.53
GLI1-201ENST00000228682 RTEL1-TNFRSF6BF6WH68 1400 aa11.74□□□□□ -0.53
GLI1-201ENST00000228682 SHANK2Q9UPX8 1470 aa11.74□□□□□ -0.53
GLI1-201ENST00000228682 CFAP74Q9C0B2 1584 aa11.73□□□□□ -0.53
GLI1-201ENST00000228682 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
GLI1-201ENST00000228682 ATP10AO60312 1499 aa11.73□□□□□ -0.53
GLI1-201ENST00000228682 DUOX2Q9NRD8 1548 aa11.73□□□□□ -0.53
GLI1-201ENST00000228682 L3MBTL2Q969R5 705 aa11.72□□□□□ -0.53
GLI1-201ENST00000228682 MLH3Q9UHC1 1453 aa11.72□□□□□ -0.53
GLI1-201ENST00000228682 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
GLI1-201ENST00000228682 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
GLI1-201ENST00000228682 PPP1R15AO75807 674 aaPredicted RBP11.71□□□□□ -0.53
GLI1-201ENST00000228682 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.54
GLI1-201ENST00000228682 CNGB1Q14028 1251 aaPredicted RBP11.7□□□□□ -0.54
GLI1-201ENST00000228682 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
GLI1-201ENST00000228682 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
GLI1-201ENST00000228682 KIDINS220Q9ULH0 1771 aa11.67□□□□□ -0.54
GLI1-201ENST00000228682 PPRC1Q5VV67 1664 aaKnown RBP11.67□□□□□ -0.54
GLI1-201ENST00000228682 IDI1Q13907 227 aa11.67□□□□□ -0.54
GLI1-201ENST00000228682 ACIN1Q9UKV3 1341 aaKnown RBP11.66□□□□□ -0.54
GLI1-201ENST00000228682 ADGBQ8N7X0 1667 aa11.65□□□□□ -0.54
GLI1-201ENST00000228682 FAM135AQ9P2D6 1515 aa11.65□□□□□ -0.54
GLI1-201ENST00000228682 PZPP20742 1482 aa11.65□□□□□ -0.54
GLI1-201ENST00000228682 ABCA6Q8N139 1617 aa11.65□□□□□ -0.54
GLI1-201ENST00000228682 CROCC2H7BZ55 1655 aa11.64□□□□□ -0.55
GLI1-201ENST00000228682 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
GLI1-201ENST00000228682 MAGI2Q86UL8 1455 aa11.64□□□□□ -0.55
GLI1-201ENST00000228682 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
GLI1-201ENST00000228682 KDM5CP41229 1560 aa11.63□□□□□ -0.55
GLI1-201ENST00000228682 ANKRD30BQ9BXX2 1392 aa11.63□□□□□ -0.55
GLI1-201ENST00000228682 INO80Q9ULG1 1556 aaPredicted RBP11.63□□□□□ -0.55
GLI1-201ENST00000228682 RICTORQ6R327 1708 aa11.62□□□□□ -0.55
GLI1-201ENST00000228682 CLSPNQ9HAW4 1339 aa11.62□□□□□ -0.55
GLI1-201ENST00000228682 STK26Q9P289 416 aa11.62□□□□□ -0.55
GLI1-201ENST00000228682 FRMPD1Q5SYB0 1578 aa11.62□□□□□ -0.55
GLI1-201ENST00000228682 SAFB2Q14151 953 aaKnown RBP eCLIP11.62□□□□□ -0.55
GLI1-201ENST00000228682 GCC2Q8IWJ2 1684 aa11.61□□□□□ -0.55
GLI1-201ENST00000228682 MAST1Q9Y2H9 1570 aa11.61□□□□□ -0.55
GLI1-201ENST00000228682 PLXNC1O60486 1568 aa11.6□□□□□ -0.55
GLI1-201ENST00000228682 NPATQ14207 1427 aa11.59□□□□□ -0.55
GLI1-201ENST00000228682 HSPA2P54652 639 aa11.59□□□□□ -0.55
GLI1-201ENST00000228682 CARD11Q9BXL7 1154 aa11.59□□□□□ -0.55
GLI1-201ENST00000228682 TMEM132EQ6IEE7 984 aa11.58□□□□□ -0.56
GLI1-201ENST00000228682 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
GLI1-201ENST00000228682 AEBP2Q6ZN18 517 aaPredicted RBP11.58□□□□□ -0.56
GLI1-201ENST00000228682 SLC52A1Q9NWF4 448 aa11.57□□□□□ -0.56
GLI1-201ENST00000228682 UGGT1Q9NYU2 1555 aa11.57□□□□□ -0.56
GLI1-201ENST00000228682 TXNDC2Q86VQ3 553 aa11.56□□□□□ -0.56
GLI1-201ENST00000228682 NBPF1Q3BBV0 1214 aa11.56□□□□□ -0.56
GLI1-201ENST00000228682 CFAP70Q5T0N1 1121 aa11.56□□□□□ -0.56
GLI1-201ENST00000228682 SLC26A8Q96RN1 970 aa11.56□□□□□ -0.56
GLI1-201ENST00000228682 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
GLI1-201ENST00000228682 ARHGEF40Q8TER5 1519 aa11.55□□□□□ -0.56
GLI1-201ENST00000228682 EID1Q9Y6B2 187 aa11.55□□□□□ -0.56
GLI1-201ENST00000228682 TNRQ92752 1358 aa11.55□□□□□ -0.56
GLI1-201ENST00000228682 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
GLI1-201ENST00000228682 TRAK1Q9UPV9 953 aa11.54□□□□□ -0.56
GLI1-201ENST00000228682 ADGRF5Q8IZF2 1346 aa11.54□□□□□ -0.56
GLI1-201ENST00000228682 ABCC3O15438 1527 aa11.53□□□□□ -0.56
GLI1-201ENST00000228682 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
GLI1-201ENST00000228682 PRDM15P57071 1507 aaPredicted RBP11.52□□□□□ -0.56
GLI1-201ENST00000228682 PLA2R1Q13018 1463 aa11.52□□□□□ -0.56
GLI1-201ENST00000228682 ROCK2O75116 1388 aaKnown RBP11.52□□□□□ -0.57
GLI1-201ENST00000228682 EIF4G2P78344 907 aaKnown RBP eCLIP11.52□□□□□ -0.57
GLI1-201ENST00000228682 THEMISQ8N1K5 641 aaPredicted RBP11.52□□□□□ -0.57
GLI1-201ENST00000228682 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.57
GLI1-201ENST00000228682 CEP152O94986 1710 aa11.51□□□□□ -0.57
GLI1-201ENST00000228682 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
GLI1-201ENST00000228682 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
GLI1-201ENST00000228682 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
GLI1-201ENST00000228682 KDM5DQ9BY66 1539 aa11.5□□□□□ -0.57
GLI1-201ENST00000228682 RPRD2Q5VT52 1461 aaKnown RBP11.5□□□□□ -0.57
GLI1-201ENST00000228682 ZNF316A6NFI3 1004 aaPredicted RBP11.5□□□□□ -0.57
GLI1-201ENST00000228682 TIMELESSQ9UNS1 1208 aa11.5□□□□□ -0.57
GLI1-201ENST00000228682 NUTM2FA1L443 756 aa11.5□□□□□ -0.57
GLI1-201ENST00000228682 HSPA5P11021 654 aaKnown RBP11.49□□□□□ -0.57
GLI1-201ENST00000228682 POGKQ9P215 609 aa11.49□□□□□ -0.57
GLI1-201ENST00000228682 NOS1P29475 1434 aa11.49□□□□□ -0.57
GLI1-201ENST00000228682 CLTCQ00610 1675 aaKnown RBP11.49□□□□□ -0.57
GLI1-201ENST00000228682 DDX10Q13206 875 aaKnown RBP11.48□□□□□ -0.57
GLI1-201ENST00000228682 UNC13BO14795 1591 aa11.48□□□□□ -0.57
GLI1-201ENST00000228682 CNTLNQ9NXG0 1405 aa11.47□□□□□ -0.57
GLI1-201ENST00000228682 ST20-MTHFSA0A0A6YYL1 179 aa11.47□□□□□ -0.57
GLI1-201ENST00000228682 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
GLI1-201ENST00000228682 LTKP29376 864 aa11.47□□□□□ -0.57
GLI1-201ENST00000228682 SIGLEC1Q9BZZ2 1709 aa11.46□□□□□ -0.57
GLI1-201ENST00000228682 IQGAP3Q86VI3 1631 aa11.46□□□□□ -0.57
GLI1-201ENST00000228682 SCAF1Q9H7N4 1312 aaKnown RBP11.46□□□□□ -0.57
GLI1-201ENST00000228682 NCKAP5LQ9HCH0 1330 aa11.46□□□□□ -0.57
GLI1-201ENST00000228682 ANKLE2Q86XL3 938 aa11.46□□□□□ -0.57
GLI1-201ENST00000228682 EFCAB6Q5THR3 1501 aa11.46□□□□□ -0.57
GLI1-201ENST00000228682 AGLP35573 1532 aa11.46□□□□□ -0.57
GLI1-201ENST00000228682 MROH1Q8NDA8 1641 aa11.46□□□□□ -0.58
GLI1-201ENST00000228682 ERVK-7P63135 1459 aa11.45□□□□□ -0.58
GLI1-201ENST00000228682 E9PCH4 1651 aa11.45□□□□□ -0.58
GLI1-201ENST00000228682 EIF2AK4Q9P2K8 1649 aaKnown RBP11.45□□□□□ -0.58
GLI1-201ENST00000228682 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.44□□□□□ -0.58
GLI1-201ENST00000228682 TMC1Q8TDI8 760 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms