RNA–Protein interactions for RNA: ENST00000225983.10

HDAC5-201, Transcript of histone deacetylase 5, humanhuman

APPRIS P3 TSL 5 BASIC

Gene HDAC5, Length 5,326 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-201ENST00000225983 KIF21BO75037 1637 aa20.32■□□□□ 0.84
HDAC5-201ENST00000225983 SLC4A10Q6U841 1118 aa20.32■□□□□ 0.84
HDAC5-201ENST00000225983 RAD54L2Q9Y4B4 1467 aa20.32■□□□□ 0.84
HDAC5-201ENST00000225983 RRP1P56182 461 aaKnown RBP20.32■□□□□ 0.84
HDAC5-201ENST00000225983 FOXD4L1Q9NU39 408 aa20.31■□□□□ 0.84
HDAC5-201ENST00000225983 ZNF644Q9H582 1327 aaPredicted RBP20.3■□□□□ 0.84
HDAC5-201ENST00000225983 ZNF330Q9Y3S2 320 aaPredicted RBP20.3■□□□□ 0.84
HDAC5-201ENST00000225983 CRBNQ96SW2 442 aa20.29■□□□□ 0.84
HDAC5-201ENST00000225983 CSB-PGBD3P0DP91 1061 aa20.29■□□□□ 0.84
HDAC5-201ENST00000225983 FGD6Q6ZV73 1430 aa20.29■□□□□ 0.84
HDAC5-201ENST00000225983 DRC7Q8IY82 874 aa20.28■□□□□ 0.84
HDAC5-201ENST00000225983 PDE4AP27815 886 aa20.28■□□□□ 0.84
HDAC5-201ENST00000225983 PTPRGP23470 1445 aa20.28■□□□□ 0.84
HDAC5-201ENST00000225983 TRIM6-TRIM34B2RNG4 842 aa20.27■□□□□ 0.84
HDAC5-201ENST00000225983 SLC4A3P48751 1232 aa20.27■□□□□ 0.84
HDAC5-201ENST00000225983 ELL2O00472 640 aaPredicted RBP20.27■□□□□ 0.84
HDAC5-201ENST00000225983 NGDNQ8NEJ9 315 aaKnown RBP20.25■□□□□ 0.83
HDAC5-201ENST00000225983 CENPQQ7L2Z9 268 aaPredicted RBP20.25■□□□□ 0.83
HDAC5-201ENST00000225983 GAPVD1Q14C86 1478 aa20.25■□□□□ 0.83
HDAC5-201ENST00000225983 NRDCO43847 1150 aa20.25■□□□□ 0.83
HDAC5-201ENST00000225983 LTV1Q96GA3 475 aaPredicted RBP20.25■□□□□ 0.83
HDAC5-201ENST00000225983 NOL8Q76FK4 1167 aaKnown RBP20.24■□□□□ 0.83
HDAC5-201ENST00000225983 APAF1O14727 1248 aa20.24■□□□□ 0.83
HDAC5-201ENST00000225983 HMMRO75330 724 aa20.23■□□□□ 0.83
HDAC5-201ENST00000225983 MYOM3Q5VTT5 1437 aa20.23■□□□□ 0.83
HDAC5-201ENST00000225983 CHAF1AQ13111 956 aaPredicted RBP20.23■□□□□ 0.83
HDAC5-201ENST00000225983 COG6Q9Y2V7 657 aa20.23■□□□□ 0.83
HDAC5-201ENST00000225983 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
HDAC5-201ENST00000225983 AMPHP49418 695 aa20.23■□□□□ 0.83
HDAC5-201ENST00000225983 E9PSI1 815 aa20.22■□□□□ 0.83
HDAC5-201ENST00000225983 LRRC9Q6ZRR7 1453 aa20.22■□□□□ 0.83
HDAC5-201ENST00000225983 LMOD3Q0VAK6 560 aa20.22■□□□□ 0.83
HDAC5-201ENST00000225983 CCDC7Q96M83 1385 aa20.21■□□□□ 0.83
HDAC5-201ENST00000225983 GOLGA6L3A6NEY3 463 aa20.21■□□□□ 0.83
HDAC5-201ENST00000225983 PTMSP20962 102 aa20.21■□□□□ 0.83
HDAC5-201ENST00000225983 CGNL1Q0VF96 1302 aa20.2■□□□□ 0.82
HDAC5-201ENST00000225983 FAM161AQ3B820 660 aa20.2■□□□□ 0.82
HDAC5-201ENST00000225983 GNL2Q13823 731 aaKnown RBP20.2■□□□□ 0.82
HDAC5-201ENST00000225983 UACAQ9BZF9 1416 aa20.2■□□□□ 0.82
HDAC5-201ENST00000225983 CHMP3Q9Y3E7 222 aa20.19■□□□□ 0.82
HDAC5-201ENST00000225983 EID1Q9Y6B2 187 aa20.19■□□□□ 0.82
HDAC5-201ENST00000225983 MINK1Q8N4C8 1332 aaPredicted RBP20.18■□□□□ 0.82
HDAC5-201ENST00000225983 EVC2Q86UK5 1308 aa20.17■□□□□ 0.82
HDAC5-201ENST00000225983 ZKSCAN2Q63HK3 967 aa20.17■□□□□ 0.82
HDAC5-201ENST00000225983 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
HDAC5-201ENST00000225983 ANKRD45Q5TZF3 282 aa20.15■□□□□ 0.82
HDAC5-201ENST00000225983 CUX1P39880 1505 aa20.15■□□□□ 0.82
HDAC5-201ENST00000225983 FOXD4L5Q5VV16 416 aaPredicted RBP20.14■□□□□ 0.82
HDAC5-201ENST00000225983 FOXD4L4Q8WXT5 416 aaPredicted RBP20.14■□□□□ 0.82
HDAC5-201ENST00000225983 WASHC2AQ641Q2 1341 aa20.13■□□□□ 0.81
HDAC5-201ENST00000225983 GPATCH3Q96I76 525 aa20.13■□□□□ 0.81
HDAC5-201ENST00000225983 ARAP1Q96P48 1450 aa20.13■□□□□ 0.81
HDAC5-201ENST00000225983 CNTLNQ9NXG0 1405 aa20.13■□□□□ 0.81
HDAC5-201ENST00000225983 NCOA2Q15596 1464 aa20.13■□□□□ 0.81
HDAC5-201ENST00000225983 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.12■□□□□ 0.81
HDAC5-201ENST00000225983 GORABQ5T7V8 394 aa20.12■□□□□ 0.81
HDAC5-201ENST00000225983 COG3Q96JB2 828 aa20.12■□□□□ 0.81
HDAC5-201ENST00000225983 CHMP4AQ9BY43 222 aa20.12■□□□□ 0.81
HDAC5-201ENST00000225983 SYAP1Q96A49 352 aaPredicted RBP20.12■□□□□ 0.81
HDAC5-201ENST00000225983 ISY1Q9ULR0 285 aaKnown RBP20.11■□□□□ 0.81
HDAC5-201ENST00000225983 HSP90B1P14625 803 aaKnown RBP20.11■□□□□ 0.81
HDAC5-201ENST00000225983 KIAA2012Q0VF49 1180 aa20.1■□□□□ 0.81
HDAC5-201ENST00000225983 AQRO60306 1485 aaKnown RBP eCLIP20.1■□□□□ 0.818e-7■■■■□ 25.6
HDAC5-201ENST00000225983 ARID3AQ99856 593 aa20.1■□□□□ 0.81
HDAC5-201ENST00000225983 CASKIN1Q8WXD9 1431 aa20.09■□□□□ 0.81
HDAC5-201ENST00000225983 ST18O60284 1047 aa20.09■□□□□ 0.81
HDAC5-201ENST00000225983 RILPL2Q969X0 211 aa20.07■□□□□ 0.8
HDAC5-201ENST00000225983 ANKRD50Q9ULJ7 1429 aa20.07■□□□□ 0.8
HDAC5-201ENST00000225983 SYNJ1O43426 1573 aa20.07■□□□□ 0.8
HDAC5-201ENST00000225983 TAF7LQ5H9L4 462 aa20.06■□□□□ 0.8
HDAC5-201ENST00000225983 FANCIQ9NVI1 1328 aa20.06■□□□□ 0.8
HDAC5-201ENST00000225983 PRDM2Q13029 1718 aa20.06■□□□□ 0.8
HDAC5-201ENST00000225983 HDAC5Q9UQL6 1122 aa20.06■□□□□ 0.8
HDAC5-201ENST00000225983 HTATSF1O43719 755 aaKnown RBP20.05■□□□□ 0.8
HDAC5-201ENST00000225983 DIAPH1O60610 1272 aaKnown RBP20.05■□□□□ 0.8
HDAC5-201ENST00000225983 RIPK4P57078 832 aa20.05■□□□□ 0.8
HDAC5-201ENST00000225983 FYCO1Q9BQS8 1478 aa20.05■□□□□ 0.8
HDAC5-201ENST00000225983 USP35Q9P2H5 1018 aa20.04■□□□□ 0.8
HDAC5-201ENST00000225983 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
HDAC5-201ENST00000225983 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
HDAC5-201ENST00000225983 DDX19BQ9UMR2 479 aa20.02■□□□□ 0.79
HDAC5-201ENST00000225983 NCAPD3P42695 1498 aa20.02■□□□□ 0.79
HDAC5-201ENST00000225983 CCDC9Q9Y3X0 531 aaKnown RBP20.01■□□□□ 0.79
HDAC5-201ENST00000225983 DDX11L8A8MPP1 907 aa20.01■□□□□ 0.79
HDAC5-201ENST00000225983 RUNDC1Q96C34 613 aa20.01■□□□□ 0.79
HDAC5-201ENST00000225983 FOXD4L6Q3SYB3 417 aaPredicted RBP20.01■□□□□ 0.79
HDAC5-201ENST00000225983 FOXD4L3Q6VB84 417 aaPredicted RBP20.01■□□□□ 0.79
HDAC5-201ENST00000225983 GSE1Q14687 1217 aa20■□□□□ 0.79
HDAC5-201ENST00000225983 CFTRP13569 1480 aa20■□□□□ 0.79
HDAC5-201ENST00000225983 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
HDAC5-201ENST00000225983 NECTIN2Q92692 538 aa20■□□□□ 0.79
HDAC5-201ENST00000225983 KIF16BQ96L93 1317 aa19.99■□□□□ 0.79
HDAC5-201ENST00000225983 ADAMTS8Q9UP79 889 aa19.99■□□□□ 0.79
HDAC5-201ENST00000225983 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
HDAC5-201ENST00000225983 CDCA7LQ96GN5 454 aa19.98■□□□□ 0.79
HDAC5-201ENST00000225983 PANK1Q8TE04 598 aa19.97■□□□□ 0.79
HDAC5-201ENST00000225983 DDX49Q9Y6V7 483 aaKnown RBP19.97■□□□□ 0.79
HDAC5-201ENST00000225983 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
HDAC5-201ENST00000225983 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
HDAC5-201ENST00000225983 MIA2Q96PC5 1412 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms