RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 GRIN2BQ13224 1484 aa12.18□□□□□ -0.46
CCL1-201ENST00000225842 PRDM2Q13029 1718 aa12.17□□□□□ -0.46
CCL1-201ENST00000225842 CCDC88BA6NC98 1476 aa12.17□□□□□ -0.46
CCL1-201ENST00000225842 PDCD7Q8N8D1 485 aaKnown RBP12.17□□□□□ -0.46
CCL1-201ENST00000225842 FBXO41Q8TF61 875 aa12.17□□□□□ -0.46
CCL1-201ENST00000225842 CCDC102AQ96A19 550 aa12.17□□□□□ -0.46
CCL1-201ENST00000225842 MINK1Q8N4C8 1332 aaPredicted RBP12.16□□□□□ -0.46
CCL1-201ENST00000225842 C2orf72A6NCS6 295 aa12.16□□□□□ -0.46
CCL1-201ENST00000225842 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
CCL1-201ENST00000225842 MAP3K9P80192 1104 aa12.16□□□□□ -0.46
CCL1-201ENST00000225842 GALR2O43603 387 aaPredicted RBP12.15□□□□□ -0.46
CCL1-201ENST00000225842 MAP2K5Q13163 448 aa12.14□□□□□ -0.47
CCL1-201ENST00000225842 UPF1Q92900 1129 aaKnown RBP eCLIP12.13□□□□□ -0.47
CCL1-201ENST00000225842 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
CCL1-201ENST00000225842 ERCC6L2Q5T890 1561 aa12.13□□□□□ -0.47
CCL1-201ENST00000225842 IRF6O14896 467 aa12.12□□□□□ -0.47
CCL1-201ENST00000225842 BOLA1Q9Y3E2 137 aa12.12□□□□□ -0.47
CCL1-201ENST00000225842 PLEKHG3A1L390 1219 aa12.11□□□□□ -0.47
CCL1-201ENST00000225842 ABCC10Q5T3U5 1492 aa12.1□□□□□ -0.47
CCL1-201ENST00000225842 KIF3CO14782 793 aa12.1□□□□□ -0.47
CCL1-201ENST00000225842 OSBPP22059 807 aa12.1□□□□□ -0.47
CCL1-201ENST00000225842 WDR97A6NE52 1622 aa12.1□□□□□ -0.47
CCL1-201ENST00000225842 G3V3G9 751 aa12.09□□□□□ -0.47
CCL1-201ENST00000225842 GNPATO15228 680 aa12.09□□□□□ -0.47
CCL1-201ENST00000225842 FECHP22830 423 aa12.09□□□□□ -0.47
CCL1-201ENST00000225842 PARP9Q8IXQ6 854 aa12.09□□□□□ -0.47
CCL1-201ENST00000225842 DDX12PQ92771 950 aa12.09□□□□□ -0.47
CCL1-201ENST00000225842 DDRGK1Q96HY6 314 aa12.09□□□□□ -0.47
CCL1-201ENST00000225842 TMEM121BQ9BXQ6 578 aaPredicted RBP12.09□□□□□ -0.47
CCL1-201ENST00000225842 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
CCL1-201ENST00000225842 ATN1P54259 1190 aaPredicted RBP12.08□□□□□ -0.48
CCL1-201ENST00000225842 AMHR2Q16671 573 aa12.08□□□□□ -0.48
CCL1-201ENST00000225842 KIF13AQ9H1H9 1805 aa12.08□□□□□ -0.48
CCL1-201ENST00000225842 FGD5Q6ZNL6 1462 aa12.08□□□□□ -0.48
CCL1-201ENST00000225842 KDM6BO15054 1643 aa12.08□□□□□ -0.48
CCL1-201ENST00000225842 HECW2Q9P2P5 1572 aa12.07□□□□□ -0.48
CCL1-201ENST00000225842 IRX5P78411 483 aaPredicted RBP12.06□□□□□ -0.48
CCL1-201ENST00000225842 OCEL1Q9H607 264 aa12.06□□□□□ -0.48
CCL1-201ENST00000225842 FCHSD2O94868 740 aa12.05□□□□□ -0.48
CCL1-201ENST00000225842 HIC1Q14526 733 aa12.05□□□□□ -0.48
CCL1-201ENST00000225842 LMTK3Q96Q04 1460 aa12.05□□□□□ -0.48
CCL1-201ENST00000225842 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
CCL1-201ENST00000225842 ADGRL1O94910 1474 aa12.04□□□□□ -0.48
CCL1-201ENST00000225842 TTLL12Q14166 644 aaPredicted RBP12.03□□□□□ -0.48
CCL1-201ENST00000225842 ARID3AQ99856 593 aa12.03□□□□□ -0.48
CCL1-201ENST00000225842 POTEHQ6S545 545 aa12.02□□□□□ -0.49
CCL1-201ENST00000225842 OXER1Q8TDS5 423 aa12.02□□□□□ -0.49
CCL1-201ENST00000225842 PTGER2P43116 358 aa12.01□□□□□ -0.49
CCL1-201ENST00000225842 PRIM1P49642 420 aaKnown RBP12.01□□□□□ -0.49
CCL1-201ENST00000225842 TMEM92Q6UXU6 159 aa12□□□□□ -0.49
CCL1-201ENST00000225842 GRIN2AQ12879 1464 aa12□□□□□ -0.49
CCL1-201ENST00000225842 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
CCL1-201ENST00000225842 NUP160Q12769 1436 aa11.99□□□□□ -0.49
CCL1-201ENST00000225842 PRG4Q92954 1404 aaPredicted RBP11.98□□□□□ -0.49
CCL1-201ENST00000225842 PLCG2P16885 1265 aa11.98□□□□□ -0.49
CCL1-201ENST00000225842 DIP2BQ9P265 1576 aa11.97□□□□□ -0.49
CCL1-201ENST00000225842 SOCS7O14512 581 aa11.97□□□□□ -0.49
CCL1-201ENST00000225842 TBC1D12O60347 775 aa11.97□□□□□ -0.49
CCL1-201ENST00000225842 EVI5O60447 810 aa11.97□□□□□ -0.49
CCL1-201ENST00000225842 IER5LQ5T953 404 aa11.97□□□□□ -0.49
CCL1-201ENST00000225842 C1orf115Q9H7X2 142 aa11.97□□□□□ -0.49
CCL1-201ENST00000225842 MAPKBP1O60336 1514 aa11.96□□□□□ -0.49
CCL1-201ENST00000225842 PTGDRQ13258 359 aa11.96□□□□□ -0.49
CCL1-201ENST00000225842 JPH4Q96JJ6 628 aa11.96□□□□□ -0.49
CCL1-201ENST00000225842 ARID3CA6NKF2 412 aa11.95□□□□□ -0.5
CCL1-201ENST00000225842 GIGYF2Q6Y7W6 1299 aaKnown RBP11.95□□□□□ -0.5
CCL1-201ENST00000225842 MS4A1P11836 297 aa11.94□□□□□ -0.5
CCL1-201ENST00000225842 FLIIQ13045 1269 aa11.94□□□□□ -0.5
CCL1-201ENST00000225842 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
CCL1-201ENST00000225842 L3MBTL3Q96JM7 780 aaPredicted RBP11.94□□□□□ -0.5
CCL1-201ENST00000225842 CUX1P39880 1505 aa11.94□□□□□ -0.5
CCL1-201ENST00000225842 PODXL2Q9NZ53 605 aa11.93□□□□□ -0.5
CCL1-201ENST00000225842 PBRM1Q86U86 1689 aa11.92□□□□□ -0.5
CCL1-201ENST00000225842 ILDR2Q71H61 639 aa11.92□□□□□ -0.5
CCL1-201ENST00000225842 SHROOM2Q13796 1616 aa11.92□□□□□ -0.5
CCL1-201ENST00000225842 EVX2Q03828 476 aa11.91□□□□□ -0.5
CCL1-201ENST00000225842 REPIN1Q9BWE0 567 aaKnown RBP11.91□□□□□ -0.5
CCL1-201ENST00000225842 HAX1O00165 279 aa11.9□□□□□ -0.5
CCL1-201ENST00000225842 APBB1O00213 710 aa11.9□□□□□ -0.5
CCL1-201ENST00000225842 PCMTD1Q96MG8 357 aaPredicted RBP11.9□□□□□ -0.5
CCL1-201ENST00000225842 GOPCQ9HD26 462 aa11.9□□□□□ -0.5
CCL1-201ENST00000225842 CDHR5Q9HBB8 845 aa11.89□□□□□ -0.51
CCL1-201ENST00000225842 ABCA10Q8WWZ4 1543 aa11.89□□□□□ -0.51
CCL1-201ENST00000225842 CLCN6P51797 869 aa11.88□□□□□ -0.51
CCL1-201ENST00000225842 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
CCL1-201ENST00000225842 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
CCL1-201ENST00000225842 DISP3Q9P2K9 1392 aa11.87□□□□□ -0.51
CCL1-201ENST00000225842 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
CCL1-201ENST00000225842 TSPOAP1O95153 1857 aa11.86□□□□□ -0.51
CCL1-201ENST00000225842 SEC24BO95487 1268 aa11.85□□□□□ -0.51
CCL1-201ENST00000225842 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
CCL1-201ENST00000225842 MDM2Q00987 491 aaPredicted RBP11.84□□□□□ -0.51
CCL1-201ENST00000225842 CLUAP1Q96AJ1 413 aa11.84□□□□□ -0.51
CCL1-201ENST00000225842 COLQQ9Y215 455 aaPredicted RBP11.84□□□□□ -0.51
CCL1-201ENST00000225842 ADCY10Q96PN6 1610 aa11.83□□□□□ -0.52
CCL1-201ENST00000225842 MAP3K7O43318 606 aa11.83□□□□□ -0.52
CCL1-201ENST00000225842 PTCD2Q8WV60 388 aaKnown RBP11.83□□□□□ -0.52
CCL1-201ENST00000225842 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
CCL1-201ENST00000225842 NPDC1Q9NQX5 325 aaPredicted RBP11.83□□□□□ -0.52
CCL1-201ENST00000225842 EN1Q05925 392 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms