RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 KCNH8Q96L42 1107 aa19.01■□□□□ 0.63
CPD-201ENST00000225719 ITPRIPQ8IWB1 547 aa19.01■□□□□ 0.63
CPD-201ENST00000225719 BECN2A8MW95 431 aa19■□□□□ 0.63
CPD-201ENST00000225719 H0YHG0 523 aa19■□□□□ 0.63
CPD-201ENST00000225719 HOOK1Q9UJC3 728 aaKnown RBP18.99■□□□□ 0.63
CPD-201ENST00000225719 ANKRD20A12PQ8NF67 263 aa18.98■□□□□ 0.63
CPD-201ENST00000225719 ISY1Q9ULR0 285 aaKnown RBP18.98■□□□□ 0.63
CPD-201ENST00000225719 CCP110O43303 1012 aa18.98■□□□□ 0.63
CPD-201ENST00000225719 CCAR2Q8N163 923 aaKnown RBP18.98■□□□□ 0.63
CPD-201ENST00000225719 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
CPD-201ENST00000225719 HDGFL2Q7Z4V5 671 aaPredicted RBP18.97■□□□□ 0.63
CPD-201ENST00000225719 PLEKHG5O94827 1062 aa18.97■□□□□ 0.63
CPD-201ENST00000225719 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
CPD-201ENST00000225719 SRPK2P78362 688 aaKnown RBP18.97■□□□□ 0.63
CPD-201ENST00000225719 MRE11P49959 708 aa18.96■□□□□ 0.63
CPD-201ENST00000225719 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
CPD-201ENST00000225719 STK11IPQ8N1F8 1099 aa18.95■□□□□ 0.62
CPD-201ENST00000225719 TRIM6-TRIM34B2RNG4 842 aa18.95■□□□□ 0.62
CPD-201ENST00000225719 INCENPQ9NQS7 918 aa18.94■□□□□ 0.62
CPD-201ENST00000225719 MYO6Q9UM54 1294 aa18.94■□□□□ 0.62
CPD-201ENST00000225719 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
CPD-201ENST00000225719 SENP3-EIF4A1A0A087X0R7 540 aa18.94■□□□□ 0.62
CPD-201ENST00000225719 TPD52L1Q16890 204 aaPredicted RBP18.93■□□□□ 0.62
CPD-201ENST00000225719 VPS8Q8N3P4 1428 aa18.93■□□□□ 0.62
CPD-201ENST00000225719 STK31Q9BXU1 1019 aa18.93■□□□□ 0.62
CPD-201ENST00000225719 CAVIN1Q6NZI2 390 aaKnown RBP18.92■□□□□ 0.62
CPD-201ENST00000225719 CAGE1Q8TC20 777 aa18.92■□□□□ 0.62
CPD-201ENST00000225719 PRKCSHP14314 528 aaPredicted RBP18.92■□□□□ 0.62
CPD-201ENST00000225719 HOMER1Q86YM7 354 aa18.92■□□□□ 0.62
CPD-201ENST00000225719 LMOD2Q6P5Q4 547 aa18.91■□□□□ 0.62
CPD-201ENST00000225719 ZRSR2Q15696 482 aaKnown RBP18.91■□□□□ 0.62
CPD-201ENST00000225719 GOLGA6L7A0A1B0GV03 622 aa18.91■□□□□ 0.62
CPD-201ENST00000225719 EIF4G1Q04637 1599 aaKnown RBP18.91■□□□□ 0.62
CPD-201ENST00000225719 MNS1Q8NEH6 495 aa18.9■□□□□ 0.62
CPD-201ENST00000225719 DEF6Q9H4E7 631 aa18.9■□□□□ 0.62
CPD-201ENST00000225719 RASSF8Q8NHQ8 419 aa18.9■□□□□ 0.62
CPD-201ENST00000225719 SF3A1Q15459 793 aaKnown RBP18.9■□□□□ 0.62
CPD-201ENST00000225719 NAT10Q9H0A0 1025 aaKnown RBP18.9■□□□□ 0.62
CPD-201ENST00000225719 ZNF592Q92610 1267 aa18.9■□□□□ 0.62
CPD-201ENST00000225719 SMC4Q9NTJ3 1288 aa18.89■□□□□ 0.62
CPD-201ENST00000225719 GORABQ5T7V8 394 aa18.89■□□□□ 0.61
CPD-201ENST00000225719 LETM1O95202 739 aaPredicted RBP18.89■□□□□ 0.61
CPD-201ENST00000225719 LRRFIP1Q32MZ4 808 aaKnown RBP18.89■□□□□ 0.61
CPD-201ENST00000225719 PATL2C9JE40 543 aaKnown RBP18.89■□□□□ 0.61
CPD-201ENST00000225719 NASPP49321 788 aaPredicted RBP18.88■□□□□ 0.61
CPD-201ENST00000225719 TMX4Q9H1E5 349 aaPredicted RBP18.88■□□□□ 0.61
CPD-201ENST00000225719 AAMPQ13685 434 aa18.88■□□□□ 0.61
CPD-201ENST00000225719 H3BQV1 296 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 REC8O95072 547 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 PDE4AP27815 886 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 IFFO2Q5TF58 517 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 CENPJQ9HC77 1338 aaPredicted RBP18.87■□□□□ 0.61
CPD-201ENST00000225719 NUCB2P80303 420 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 NEXNQ0ZGT2 675 aa18.87■□□□□ 0.61
CPD-201ENST00000225719 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
CPD-201ENST00000225719 NCBP3Q53F19 620 aaKnown RBP18.86■□□□□ 0.61
CPD-201ENST00000225719 CHMP5Q9NZZ3 219 aa18.86■□□□□ 0.61
CPD-201ENST00000225719 HSPA5P11021 654 aaKnown RBP18.86■□□□□ 0.61
CPD-201ENST00000225719 NLRP13Q86W25 1043 aa18.85■□□□□ 0.61
CPD-201ENST00000225719 U2AF1L5P0DN76 240 aaPredicted RBP18.85■□□□□ 0.61
CPD-201ENST00000225719 U2AF1Q01081 240 aaKnown RBP eCLIP18.85■□□□□ 0.61
CPD-201ENST00000225719 FMN1Q68DA7 1419 aa18.85■□□□□ 0.61
CPD-201ENST00000225719 CCDC173Q0VFZ6 552 aa18.84■□□□□ 0.61
CPD-201ENST00000225719 APBB1O00213 710 aa18.84■□□□□ 0.61
CPD-201ENST00000225719 IFT57Q9NWB7 429 aa18.83■□□□□ 0.61
CPD-201ENST00000225719 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
CPD-201ENST00000225719 PRM3Q9NNZ6 103 aa18.83■□□□□ 0.6
CPD-201ENST00000225719 KIAA0754O94854 1291 aa18.82■□□□□ 0.6
CPD-201ENST00000225719 CGNL1Q0VF96 1302 aa18.81■□□□□ 0.6
CPD-201ENST00000225719 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
CPD-201ENST00000225719 PES1O00541 588 aaKnown RBP18.8■□□□□ 0.6
CPD-201ENST00000225719 NEFHP12036 1026 aa18.8■□□□□ 0.6
CPD-201ENST00000225719 DYDC1Q8WWB3 177 aa18.8■□□□□ 0.6
CPD-201ENST00000225719 TERF2IPQ9NYB0 399 aa18.8■□□□□ 0.6
CPD-201ENST00000225719 PDCL2Q8N4E4 241 aa18.8■□□□□ 0.6
CPD-201ENST00000225719 KIF7Q2M1P5 1343 aa18.8■□□□□ 0.6
CPD-201ENST00000225719 FAM184AQ8NB25 1140 aa18.8■□□□□ 0.6
CPD-201ENST00000225719 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
CPD-201ENST00000225719 NGEFQ8N5V2 710 aa18.78■□□□□ 0.6
CPD-201ENST00000225719 CREBRFQ8IUR6 639 aa18.77■□□□□ 0.6
CPD-201ENST00000225719 EIF3JO75822 258 aaKnown RBP18.77■□□□□ 0.6
CPD-201ENST00000225719 RAB3GAP2Q9H2M9 1393 aa18.76■□□□□ 0.59
CPD-201ENST00000225719 ERCC6Q03468 1493 aa18.76■□□□□ 0.59
CPD-201ENST00000225719 CPLX2Q6PUV4 134 aaKnown RBP18.76■□□□□ 0.59
CPD-201ENST00000225719 SASS6Q6UVJ0 657 aa18.75■□□□□ 0.59
CPD-201ENST00000225719 MBD3O95983 291 aa18.75■□□□□ 0.59
CPD-201ENST00000225719 RUFY2Q8WXA3 655 aa18.75■□□□□ 0.59
CPD-201ENST00000225719 CCDC47Q96A33 483 aaKnown RBP18.75■□□□□ 0.59
CPD-201ENST00000225719 ANKRD30AQ9BXX3 1397 aa18.75■□□□□ 0.59
CPD-201ENST00000225719 AKAP17AQ02040 695 aaKnown RBP18.75■□□□□ 0.59
CPD-201ENST00000225719 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
CPD-201ENST00000225719 GOLGA6L10A6NI86 522 aa18.74■□□□□ 0.59
CPD-201ENST00000225719 CCDC18Q5T9S5 1454 aa18.73■□□□□ 0.59
CPD-201ENST00000225719 FAM107BQ9H098 131 aa18.73■□□□□ 0.59
CPD-201ENST00000225719 R3HCC1Q9Y3T6 440 aaKnown RBP18.73■□□□□ 0.59
CPD-201ENST00000225719 RNF20Q5VTR2 975 aa18.72■□□□□ 0.59
CPD-201ENST00000225719 MYBBP1AQ9BQG0 1328 aaKnown RBP18.72■□□□□ 0.59
CPD-201ENST00000225719 CHMP3Q9Y3E7 222 aa18.72■□□□□ 0.59
CPD-201ENST00000225719 CARMIL2Q6F5E8 1435 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms