RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
RAB3D-201ENST00000222120 CAMSAP2Q08AD1 1489 aa17.76■□□□□ 0.43
RAB3D-201ENST00000222120 MORC1Q86VD1 984 aa17.75■□□□□ 0.43
RAB3D-201ENST00000222120 U2SURPO15042 1029 aaKnown RBP17.74■□□□□ 0.43
RAB3D-201ENST00000222120 RPRD2Q5VT52 1461 aaKnown RBP17.73■□□□□ 0.43
RAB3D-201ENST00000222120 RRP1P56182 461 aaKnown RBP17.73■□□□□ 0.43
RAB3D-201ENST00000222120 SYNJ2O15056 1496 aa17.72■□□□□ 0.43
RAB3D-201ENST00000222120 NUP153P49790 1475 aaKnown RBP17.72■□□□□ 0.43
RAB3D-201ENST00000222120 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
RAB3D-201ENST00000222120 MLECQ14165 292 aa17.71■□□□□ 0.43
RAB3D-201ENST00000222120 POGKQ9P215 609 aa17.71■□□□□ 0.43
RAB3D-201ENST00000222120 MAGI3Q5TCQ9 1506 aa17.7■□□□□ 0.42
RAB3D-201ENST00000222120 ARHGAP5Q13017 1502 aa17.7■□□□□ 0.42
RAB3D-201ENST00000222120 SRPK2P78362 688 aaKnown RBP17.69■□□□□ 0.42
RAB3D-201ENST00000222120 RRP7AQ9Y3A4 280 aaKnown RBP17.69■□□□□ 0.42
RAB3D-201ENST00000222120 DEKP35659 375 aaKnown RBP17.69■□□□□ 0.42
RAB3D-201ENST00000222120 GPATCH8Q9UKJ3 1502 aaKnown RBP17.68■□□□□ 0.42
RAB3D-201ENST00000222120 GOLGA2Q08379 1002 aa17.68■□□□□ 0.42
RAB3D-201ENST00000222120 KIF21AQ7Z4S6 1674 aa17.68■□□□□ 0.42
RAB3D-201ENST00000222120 ARXQ96QS3 562 aa17.67■□□□□ 0.42
RAB3D-201ENST00000222120 CRBNQ96SW2 442 aa17.67■□□□□ 0.42
RAB3D-201ENST00000222120 ADAMTS8Q9UP79 889 aa17.67■□□□□ 0.42
RAB3D-201ENST00000222120 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
RAB3D-201ENST00000222120 ARID4BQ4LE39 1312 aaPredicted RBP17.67■□□□□ 0.42
RAB3D-201ENST00000222120 APAF1O14727 1248 aa17.67■□□□□ 0.42
RAB3D-201ENST00000222120 PDE3BQ13370 1112 aa17.67■□□□□ 0.42
RAB3D-201ENST00000222120 EIF5BO60841 1220 aaKnown RBP17.66■□□□□ 0.42
RAB3D-201ENST00000222120 CFAP70Q5T0N1 1121 aa17.66■□□□□ 0.42
RAB3D-201ENST00000222120 WASHC2CQ9Y4E1 1318 aa17.65■□□□□ 0.42
RAB3D-201ENST00000222120 UPF2Q9HAU5 1272 aaKnown RBP17.65■□□□□ 0.42
RAB3D-201ENST00000222120 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
RAB3D-201ENST00000222120 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.41
RAB3D-201ENST00000222120 CLUAP1Q96AJ1 413 aa17.63■□□□□ 0.41
RAB3D-201ENST00000222120 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
RAB3D-201ENST00000222120 TCERG1O14776 1098 aaKnown RBP17.61■□□□□ 0.41
RAB3D-201ENST00000222120 TMEM132EQ6IEE7 984 aa17.61■□□□□ 0.41
RAB3D-201ENST00000222120 FTSJ3Q8IY81 847 aaKnown RBP17.61■□□□□ 0.41
RAB3D-201ENST00000222120 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
RAB3D-201ENST00000222120 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
RAB3D-201ENST00000222120 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
RAB3D-201ENST00000222120 IPO9Q96P70 1041 aaKnown RBP17.61■□□□□ 0.41
RAB3D-201ENST00000222120 BCL2L13Q9BXK5 485 aa17.61■□□□□ 0.41
RAB3D-201ENST00000222120 RTN4Q9NQC3 1192 aaKnown RBP17.61■□□□□ 0.41
RAB3D-201ENST00000222120 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
RAB3D-201ENST00000222120 WDR62O43379 1518 aa17.6■□□□□ 0.41
RAB3D-201ENST00000222120 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
RAB3D-201ENST00000222120 PDE4AP27815 886 aa17.59■□□□□ 0.41
RAB3D-201ENST00000222120 ADAMTS12P58397 1594 aa17.59■□□□□ 0.41
RAB3D-201ENST00000222120 SAMD9Q5K651 1589 aa17.58■□□□□ 0.41
RAB3D-201ENST00000222120 MSH5O43196 834 aa17.58■□□□□ 0.41
RAB3D-201ENST00000222120 ATP10BO94823 1461 aa17.58■□□□□ 0.4
RAB3D-201ENST00000222120 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
RAB3D-201ENST00000222120 DISP1Q96F81 1524 aa17.57■□□□□ 0.4
RAB3D-201ENST00000222120 SLC4A3P48751 1232 aa17.57■□□□□ 0.4
RAB3D-201ENST00000222120 RAPGEF6Q8TEU7 1601 aa17.57■□□□□ 0.4
RAB3D-201ENST00000222120 EIF3AQ14152 1382 aaKnown RBP17.57■□□□□ 0.4
RAB3D-201ENST00000222120 SKAP1Q86WV1 359 aa17.56■□□□□ 0.4
RAB3D-201ENST00000222120 KDM6BO15054 1643 aa17.56■□□□□ 0.4
RAB3D-201ENST00000222120 SOX12O15370 315 aa17.55■□□□□ 0.4
RAB3D-201ENST00000222120 PPP2R1AP30153 589 aa17.55■□□□□ 0.4
RAB3D-201ENST00000222120 SCAPERQ9BY12 1400 aa17.53■□□□□ 0.4
RAB3D-201ENST00000222120 KIAA0556O60303 1618 aa17.53■□□□□ 0.4
RAB3D-201ENST00000222120 CCDC141Q6ZP82 1450 aa17.53■□□□□ 0.4
RAB3D-201ENST00000222120 PAK3O75914 559 aaPredicted RBP17.52■□□□□ 0.4
RAB3D-201ENST00000222120 SMG6Q86US8 1419 aaKnown RBP17.52■□□□□ 0.4
RAB3D-201ENST00000222120 HSP90AA1P07900 732 aaKnown RBP17.52■□□□□ 0.4
RAB3D-201ENST00000222120 PLEKHH2Q8IVE3 1493 aa17.52■□□□□ 0.4
RAB3D-201ENST00000222120 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
RAB3D-201ENST00000222120 PZPP20742 1482 aa17.5■□□□□ 0.39
RAB3D-201ENST00000222120 SLC12A5Q9H2X9 1139 aa17.49■□□□□ 0.39
RAB3D-201ENST00000222120 CENPJQ9HC77 1338 aaPredicted RBP17.49■□□□□ 0.39
RAB3D-201ENST00000222120 KIF14Q15058 1648 aa17.49■□□□□ 0.39
RAB3D-201ENST00000222120 ERBINQ96RT1 1412 aa17.48■□□□□ 0.39
RAB3D-201ENST00000222120 SPRYD3Q8NCJ5 442 aa17.48■□□□□ 0.39
RAB3D-201ENST00000222120 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
RAB3D-201ENST00000222120 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
RAB3D-201ENST00000222120 CYB5RLQ6IPT4 315 aa17.47■□□□□ 0.39
RAB3D-201ENST00000222120 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.47■□□□□ 0.39
RAB3D-201ENST00000222120 DISP3Q9P2K9 1392 aa17.46■□□□□ 0.39
RAB3D-201ENST00000222120 NUTM2FA1L443 756 aa17.45■□□□□ 0.38
RAB3D-201ENST00000222120 PBRM1Q86U86 1689 aa17.45■□□□□ 0.38
RAB3D-201ENST00000222120 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
RAB3D-201ENST00000222120 TEX14Q8IWB6 1497 aa17.44■□□□□ 0.38
RAB3D-201ENST00000222120 CABP2Q9NPB3 220 aa17.44■□□□□ 0.38
RAB3D-201ENST00000222120 C14orf37Q86TY3 774 aa17.44■□□□□ 0.38
RAB3D-201ENST00000222120 EIF4G3O43432 1585 aaKnown RBP17.43■□□□□ 0.38
RAB3D-201ENST00000222120 BCAR3O75815 825 aa17.43■□□□□ 0.38
RAB3D-201ENST00000222120 OSCARQ8IYS5 282 aa17.43■□□□□ 0.38
RAB3D-201ENST00000222120 DHX29Q7Z478 1369 aaKnown RBP17.43■□□□□ 0.38
RAB3D-201ENST00000222120 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
RAB3D-201ENST00000222120 BECN1Q14457 450 aa17.43■□□□□ 0.38
RAB3D-201ENST00000222120 RAPGEF3O95398 923 aa17.43■□□□□ 0.38
RAB3D-201ENST00000222120 E9PSI1 815 aa17.42■□□□□ 0.38
RAB3D-201ENST00000222120 PANK1Q8TE04 598 aa17.42■□□□□ 0.38
RAB3D-201ENST00000222120 SLKQ9H2G2 1235 aaPredicted RBP17.42■□□□□ 0.38
RAB3D-201ENST00000222120 MTHFSP49914 203 aa17.41■□□□□ 0.38
RAB3D-201ENST00000222120 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
RAB3D-201ENST00000222120 ITPRIPQ8IWB1 547 aa17.41■□□□□ 0.38
RAB3D-201ENST00000222120 GGNBP2Q9H3C7 697 aa17.41■□□□□ 0.38
RAB3D-201ENST00000222120 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms