RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
CRX-201ENST00000221996 PPM1GO15355 546 aaPredicted RBP12.78□□□□□ -0.36
CRX-201ENST00000221996 NUTM2DQ5VT03 806 aaPredicted RBP12.78□□□□□ -0.36
CRX-201ENST00000221996 EIF3AQ14152 1382 aaKnown RBP12.78□□□□□ -0.36
CRX-201ENST00000221996 WASHC2CQ9Y4E1 1318 aa12.78□□□□□ -0.36
CRX-201ENST00000221996 SRPK2P78362 688 aaKnown RBP12.77□□□□□ -0.37
CRX-201ENST00000221996 GPATCH8Q9UKJ3 1502 aaKnown RBP12.77□□□□□ -0.37
CRX-201ENST00000221996 RPRD2Q5VT52 1461 aaKnown RBP12.77□□□□□ -0.37
CRX-201ENST00000221996 MLECQ14165 292 aa12.77□□□□□ -0.37
CRX-201ENST00000221996 FRAT1Q92837 279 aaPredicted RBP12.77□□□□□ -0.37
CRX-201ENST00000221996 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.37
CRX-201ENST00000221996 PDE3BQ13370 1112 aa12.76□□□□□ -0.37
CRX-201ENST00000221996 U2SURPO15042 1029 aaKnown RBP12.75□□□□□ -0.37
CRX-201ENST00000221996 WDR62O43379 1518 aa12.75□□□□□ -0.37
CRX-201ENST00000221996 TCOF1Q13428 1488 aaKnown RBP12.75□□□□□ -0.37
CRX-201ENST00000221996 RGS3P49796 1198 aa12.75□□□□□ -0.37
CRX-201ENST00000221996 CCDC146Q8IYE0 955 aa12.75□□□□□ -0.37
CRX-201ENST00000221996 RAPGEF6Q8TEU7 1601 aa12.74□□□□□ -0.37
CRX-201ENST00000221996 UPF2Q9HAU5 1272 aaKnown RBP12.74□□□□□ -0.37
CRX-201ENST00000221996 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
CRX-201ENST00000221996 OSCARQ8IYS5 282 aa12.73□□□□□ -0.37
CRX-201ENST00000221996 CCDC141Q6ZP82 1450 aa12.72□□□□□ -0.37
CRX-201ENST00000221996 MAPK8IP3Q9UPT6 1336 aa12.72□□□□□ -0.37
CRX-201ENST00000221996 KIAA0556O60303 1618 aa12.72□□□□□ -0.37
CRX-201ENST00000221996 NOP58Q9Y2X3 529 aaKnown RBP12.72□□□□□ -0.37
CRX-201ENST00000221996 KIF14Q15058 1648 aa12.72□□□□□ -0.37
CRX-201ENST00000221996 GOLGA2Q08379 1002 aa12.71□□□□□ -0.37
CRX-201ENST00000221996 ATP10BO94823 1461 aa12.71□□□□□ -0.38
CRX-201ENST00000221996 PLEKHH2Q8IVE3 1493 aa12.7□□□□□ -0.38
CRX-201ENST00000221996 DISP1Q96F81 1524 aa12.7□□□□□ -0.38
CRX-201ENST00000221996 PLIN1O60240 522 aa12.7□□□□□ -0.38
CRX-201ENST00000221996 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
CRX-201ENST00000221996 MAGI3Q5TCQ9 1506 aa12.7□□□□□ -0.38
CRX-201ENST00000221996 RRP1P56182 461 aaKnown RBP12.7□□□□□ -0.38
CRX-201ENST00000221996 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
CRX-201ENST00000221996 EXOC6Q8TAG9 804 aa12.69□□□□□ -0.38
CRX-201ENST00000221996 FTSJ3Q8IY81 847 aaKnown RBP12.69□□□□□ -0.38
CRX-201ENST00000221996 TARBP1Q13395 1621 aaKnown RBP12.68□□□□□ -0.38
CRX-201ENST00000221996 U2AF1L5P0DN76 240 aaPredicted RBP12.68□□□□□ -0.38
CRX-201ENST00000221996 U2AF1Q01081 240 aaKnown RBP eCLIP12.68□□□□□ -0.38
CRX-201ENST00000221996 LAS1LQ9Y4W2 734 aaKnown RBP12.68□□□□□ -0.38
CRX-201ENST00000221996 PBRM1Q86U86 1689 aa12.68□□□□□ -0.38
CRX-201ENST00000221996 CFAP70Q5T0N1 1121 aa12.68□□□□□ -0.38
CRX-201ENST00000221996 DDRGK1Q96HY6 314 aa12.67□□□□□ -0.38
CRX-201ENST00000221996 STAC3Q96MF2 364 aa12.67□□□□□ -0.38
CRX-201ENST00000221996 EIF4G3O43432 1585 aaKnown RBP12.67□□□□□ -0.38
CRX-201ENST00000221996 SCAPERQ9BY12 1400 aa12.66□□□□□ -0.38
CRX-201ENST00000221996 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
CRX-201ENST00000221996 TCERG1O14776 1098 aaKnown RBP12.65□□□□□ -0.38
CRX-201ENST00000221996 APAF1O14727 1248 aa12.64□□□□□ -0.39
CRX-201ENST00000221996 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
CRX-201ENST00000221996 VGFO15240 615 aaPredicted RBP12.63□□□□□ -0.39
CRX-201ENST00000221996 ADAMTS8Q9UP79 889 aa12.63□□□□□ -0.39
CRX-201ENST00000221996 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
CRX-201ENST00000221996 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
CRX-201ENST00000221996 CENPJQ9HC77 1338 aaPredicted RBP12.62□□□□□ -0.39
CRX-201ENST00000221996 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
CRX-201ENST00000221996 TMEM132EQ6IEE7 984 aa12.62□□□□□ -0.39
CRX-201ENST00000221996 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
CRX-201ENST00000221996 ERBINQ96RT1 1412 aa12.61□□□□□ -0.39
CRX-201ENST00000221996 HSP90AA1P07900 732 aaKnown RBP12.6□□□□□ -0.39
CRX-201ENST00000221996 ITSN2Q9NZM3 1697 aa12.6□□□□□ -0.39
CRX-201ENST00000221996 NUP160Q12769 1436 aa12.6□□□□□ -0.39
CRX-201ENST00000221996 PPP2R1AP30153 589 aa12.6□□□□□ -0.39
CRX-201ENST00000221996 TERF2IPQ9NYB0 399 aa12.6□□□□□ -0.39
CRX-201ENST00000221996 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
CRX-201ENST00000221996 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
CRX-201ENST00000221996 DNMT1P26358 1616 aaKnown RBP12.59□□□□□ -0.39
CRX-201ENST00000221996 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
CRX-201ENST00000221996 EVC2Q86UK5 1308 aa12.59□□□□□ -0.39
CRX-201ENST00000221996 PZPP20742 1482 aa12.59□□□□□ -0.39
CRX-201ENST00000221996 MYH16Q9H6N6 1097 aa12.58□□□□□ -0.39
CRX-201ENST00000221996 CGNL1Q0VF96 1302 aa12.58□□□□□ -0.4
CRX-201ENST00000221996 SOX12O15370 315 aa12.58□□□□□ -0.4
CRX-201ENST00000221996 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
CRX-201ENST00000221996 SMG6Q86US8 1419 aaKnown RBP12.57□□□□□ -0.4
CRX-201ENST00000221996 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
CRX-201ENST00000221996 MINK1Q8N4C8 1332 aaPredicted RBP12.57□□□□□ -0.4
CRX-201ENST00000221996 MS4A1P11836 297 aa12.57□□□□□ -0.4
CRX-201ENST00000221996 BECN1Q14457 450 aa12.57□□□□□ -0.4
CRX-201ENST00000221996 FANCIQ9NVI1 1328 aa12.57□□□□□ -0.4
CRX-201ENST00000221996 E9PSI1 815 aa12.56□□□□□ -0.4
CRX-201ENST00000221996 IPO9Q96P70 1041 aaKnown RBP12.56□□□□□ -0.4
CRX-201ENST00000221996 ZBTB7CA1YPR0 619 aa12.55□□□□□ -0.4
CRX-201ENST00000221996 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
CRX-201ENST00000221996 RAPGEF3O95398 923 aa12.55□□□□□ -0.4
CRX-201ENST00000221996 BCL2L13Q9BXK5 485 aa12.55□□□□□ -0.4
CRX-201ENST00000221996 PDE4AP27815 886 aa12.54□□□□□ -0.4
CRX-201ENST00000221996 SYCP2Q9BX26 1530 aa12.54□□□□□ -0.4
CRX-201ENST00000221996 CEP170Q5SW79 1584 aa12.54□□□□□ -0.4
CRX-201ENST00000221996 KDM6BO15054 1643 aa12.53□□□□□ -0.4
CRX-201ENST00000221996 SLC12A5Q9H2X9 1139 aa12.53□□□□□ -0.4
CRX-201ENST00000221996 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
CRX-201ENST00000221996 FAM69CQ0P6D2 419 aa12.53□□□□□ -0.4
CRX-201ENST00000221996 TEX14Q8IWB6 1497 aa12.53□□□□□ -0.4
CRX-201ENST00000221996 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
CRX-201ENST00000221996 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
CRX-201ENST00000221996 CENPQQ7L2Z9 268 aaPredicted RBP12.51□□□□□ -0.41
CRX-201ENST00000221996 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
CRX-201ENST00000221996 ARXQ96QS3 562 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms