RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 AK7Q96M32 723 aa13.63□□□□□ -0.23
USP31-201ENST00000219689 LEKR1Q6ZMV7 388 aa13.62□□□□□ -0.23
USP31-201ENST00000219689 DEF6Q9H4E7 631 aa13.62□□□□□ -0.23
USP31-201ENST00000219689 CHMP3Q9Y3E7 222 aa13.62□□□□□ -0.23
USP31-201ENST00000219689 C14orf37Q86TY3 774 aa13.62□□□□□ -0.23
USP31-201ENST00000219689 MSH5O43196 834 aa13.61□□□□□ -0.23
USP31-201ENST00000219689 RRP1P56182 461 aaKnown RBP13.61□□□□□ -0.23
USP31-201ENST00000219689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.61□□□□□ -0.23
USP31-201ENST00000219689 TPD52L1Q16890 204 aaPredicted RBP13.61□□□□□ -0.23
USP31-201ENST00000219689 TRAK2O60296 914 aa13.61□□□□□ -0.23
USP31-201ENST00000219689 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
USP31-201ENST00000219689 CCDC173Q0VFZ6 552 aa13.6□□□□□ -0.23
USP31-201ENST00000219689 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
USP31-201ENST00000219689 CGNQ9P2M7 1197 aaKnown RBP13.6□□□□□ -0.23
USP31-201ENST00000219689 GORABQ5T7V8 394 aa13.6□□□□□ -0.23
USP31-201ENST00000219689 MNS1Q8NEH6 495 aa13.6□□□□□ -0.23
USP31-201ENST00000219689 BECN2A8MW95 431 aa13.6□□□□□ -0.23
USP31-201ENST00000219689 GOLGA2Q08379 1002 aa13.59□□□□□ -0.23
USP31-201ENST00000219689 FBXW7Q969H0 707 aa13.59□□□□□ -0.23
USP31-201ENST00000219689 CBX1P83916 185 aa13.59□□□□□ -0.23
USP31-201ENST00000219689 DHX37Q8IY37 1157 aaKnown RBP13.59□□□□□ -0.23
USP31-201ENST00000219689 RUFY1Q96T51 708 aa13.58□□□□□ -0.24
USP31-201ENST00000219689 CCDC34Q96HJ3 373 aa13.58□□□□□ -0.24
USP31-201ENST00000219689 HSP90B2PQ58FF3 399 aa13.58□□□□□ -0.24
USP31-201ENST00000219689 PES1O00541 588 aaKnown RBP13.58□□□□□ -0.24
USP31-201ENST00000219689 NPHP1O15259 732 aa13.58□□□□□ -0.24
USP31-201ENST00000219689 IPO8O15397 1037 aaKnown RBP13.58□□□□□ -0.24
USP31-201ENST00000219689 GOLGA4Q13439 2230 aaKnown RBP13.57□□□□□ -0.24
USP31-201ENST00000219689 CCDC191Q8NCU4 936 aa13.57□□□□□ -0.24
USP31-201ENST00000219689 RNF214Q8ND24 703 aa13.57□□□□□ -0.24
USP31-201ENST00000219689 ZBED9Q6R2W3 1325 aa13.56□□□□□ -0.24
USP31-201ENST00000219689 ACBD3Q9H3P7 528 aa13.56□□□□□ -0.24
USP31-201ENST00000219689 PLPPR3Q6T4P5 718 aa13.56□□□□□ -0.24
USP31-201ENST00000219689 CCNB3Q8WWL7 1395 aa13.56□□□□□ -0.24
USP31-201ENST00000219689 TRERF1Q96PN7 1200 aa13.56□□□□□ -0.24
USP31-201ENST00000219689 TNNT1P13805 278 aa13.55□□□□□ -0.24
USP31-201ENST00000219689 HMGN5P82970 282 aaKnown RBP13.55□□□□□ -0.24
USP31-201ENST00000219689 CAVIN1Q6NZI2 390 aaKnown RBP13.55□□□□□ -0.24
USP31-201ENST00000219689 TSR1Q2NL82 804 aaKnown RBP13.54□□□□□ -0.24
USP31-201ENST00000219689 CCDC146Q8IYE0 955 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 TSPYL1Q9H0U9 437 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 PDCL3Q9H2J4 239 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 PRM3Q9NNZ6 103 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 H3BQV1 296 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 IRX3P78415 501 aaPredicted RBP13.54□□□□□ -0.24
USP31-201ENST00000219689 IFFO2Q5TF58 517 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
USP31-201ENST00000219689 CLUAP1Q96AJ1 413 aa13.53□□□□□ -0.24
USP31-201ENST00000219689 SETD5Q9C0A6 1442 aa13.53□□□□□ -0.24
USP31-201ENST00000219689 SF3A1Q15459 793 aaKnown RBP13.53□□□□□ -0.24
USP31-201ENST00000219689 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
USP31-201ENST00000219689 MPNDQ8N594 471 aa13.53□□□□□ -0.24
USP31-201ENST00000219689 ESPNB1AK53 854 aa13.52□□□□□ -0.24
USP31-201ENST00000219689 PABPN1Q86U42 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
USP31-201ENST00000219689 SPC24Q8NBT2 197 aa13.52□□□□□ -0.25
USP31-201ENST00000219689 TPM1P09493 284 aa13.51□□□□□ -0.25
USP31-201ENST00000219689 SMC4Q9NTJ3 1288 aa13.51□□□□□ -0.25
USP31-201ENST00000219689 CENPJQ9HC77 1338 aaPredicted RBP13.51□□□□□ -0.25
USP31-201ENST00000219689 RALBP1Q15311 655 aa13.51□□□□□ -0.25
USP31-201ENST00000219689 PAXIP1Q6ZW49 1069 aaPredicted RBP13.5□□□□□ -0.25
USP31-201ENST00000219689 STK11IPQ8N1F8 1099 aa13.5□□□□□ -0.25
USP31-201ENST00000219689 TSPY4P0CV99 314 aa13.5□□□□□ -0.25
USP31-201ENST00000219689 TSPY10P0CW01 314 aa13.5□□□□□ -0.25
USP31-201ENST00000219689 GIMAP7Q8NHV1 300 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 RSF1Q96T23 1441 aaPredicted RBP13.49□□□□□ -0.25
USP31-201ENST00000219689 CENPHQ9H3R5 247 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 PDIA4P13667 645 aaKnown RBP13.49□□□□□ -0.25
USP31-201ENST00000219689 TMF1P82094 1093 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 FBXO3Q9UK99 471 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 PDCL2Q8N4E4 241 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 TSPY26PQ9H489 355 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 ATP6V1DQ9Y5K8 247 aa13.49□□□□□ -0.25
USP31-201ENST00000219689 MEX3CQ5U5Q3 659 aaKnown RBP13.48□□□□□ -0.25
USP31-201ENST00000219689 ISY1Q9ULR0 285 aaKnown RBP13.48□□□□□ -0.25
USP31-201ENST00000219689 IPO4Q8TEX9 1081 aaKnown RBP13.48□□□□□ -0.25
USP31-201ENST00000219689 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
USP31-201ENST00000219689 KIAA0754O94854 1291 aa13.48□□□□□ -0.25
USP31-201ENST00000219689 RASSF8Q8NHQ8 419 aa13.48□□□□□ -0.25
USP31-201ENST00000219689 GPATCH3Q96I76 525 aa13.47□□□□□ -0.25
USP31-201ENST00000219689 ANKRD45Q5TZF3 282 aa13.47□□□□□ -0.25
USP31-201ENST00000219689 KIF3AQ9Y496 699 aa13.47□□□□□ -0.25
USP31-201ENST00000219689 MORC1Q86VD1 984 aa13.46□□□□□ -0.25
USP31-201ENST00000219689 SASS6Q6UVJ0 657 aa13.46□□□□□ -0.25
USP31-201ENST00000219689 C22orf23Q9BZE7 217 aa13.46□□□□□ -0.25
USP31-201ENST00000219689 AXDND1Q5T1B0 1012 aaPredicted RBP13.46□□□□□ -0.26
USP31-201ENST00000219689 DYDC1Q8WWB3 177 aa13.46□□□□□ -0.26
USP31-201ENST00000219689 CEP89Q96ST8 783 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 PPP1R15AO75807 674 aaPredicted RBP13.45□□□□□ -0.26
USP31-201ENST00000219689 IBSPP21815 317 aaPredicted RBP13.45□□□□□ -0.26
USP31-201ENST00000219689 PDE3BQ13370 1112 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 HMMRO75330 724 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 CDR1P51861 262 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
USP31-201ENST00000219689 TTLL5Q6EMB2 1281 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 CALCOCO1Q9P1Z2 691 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 DCTN1Q14203 1278 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 FOXD1Q16676 465 aa13.45□□□□□ -0.26
USP31-201ENST00000219689 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
USP31-201ENST00000219689 NUCB2P80303 420 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms