RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 HDGFL2Q7Z4V5 671 aaPredicted RBP12.46□□□□□ -0.41
CCDC113-201ENST00000219299 NAIPQ13075 1403 aa12.46□□□□□ -0.41
CCDC113-201ENST00000219299 CEP170Q5SW79 1584 aa12.46□□□□□ -0.42
CCDC113-201ENST00000219299 NEUROD2Q15784 382 aa12.46□□□□□ -0.42
CCDC113-201ENST00000219299 EIF3AQ14152 1382 aaKnown RBP12.45□□□□□ -0.42
CCDC113-201ENST00000219299 TMEM132EQ6IEE7 984 aa12.45□□□□□ -0.42
CCDC113-201ENST00000219299 AKNAQ7Z591 1439 aa12.45□□□□□ -0.42
CCDC113-201ENST00000219299 MORC1Q86VD1 984 aa12.45□□□□□ -0.42
CCDC113-201ENST00000219299 DENND4BO75064 1496 aaPredicted RBP12.44□□□□□ -0.42
CCDC113-201ENST00000219299 MINK1Q8N4C8 1332 aaPredicted RBP12.44□□□□□ -0.42
CCDC113-201ENST00000219299 U2SURPO15042 1029 aaKnown RBP12.44□□□□□ -0.42
CCDC113-201ENST00000219299 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
CCDC113-201ENST00000219299 TXNDC2Q86VQ3 553 aa12.44□□□□□ -0.42
CCDC113-201ENST00000219299 WDR7Q9Y4E6 1490 aa12.44□□□□□ -0.42
CCDC113-201ENST00000219299 NGDNQ8NEJ9 315 aaKnown RBP12.43□□□□□ -0.42
CCDC113-201ENST00000219299 PLCH2O75038 1416 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCDC113-201ENST00000219299 NCOA1Q15788 1441 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 CFAP70Q5T0N1 1121 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 SLC52A1Q9NWF4 448 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 WDR97A6NE52 1622 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 ROCK1Q13464 1354 aa12.43□□□□□ -0.42
CCDC113-201ENST00000219299 ABCC2Q92887 1545 aa12.42□□□□□ -0.42
CCDC113-201ENST00000219299 PTPN23Q9H3S7 1636 aa12.42□□□□□ -0.42
CCDC113-201ENST00000219299 NPM2Q86SE8 214 aaKnown RBP12.41□□□□□ -0.42
CCDC113-201ENST00000219299 POGZQ7Z3K3 1410 aa12.41□□□□□ -0.42
CCDC113-201ENST00000219299 CEBPAP49715 358 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-201ENST00000219299 TERF2IPQ9NYB0 399 aa12.4□□□□□ -0.42
CCDC113-201ENST00000219299 KIAA1107Q9UPP5 1409 aa12.4□□□□□ -0.42
CCDC113-201ENST00000219299 USP47Q96K76 1375 aa12.4□□□□□ -0.42
CCDC113-201ENST00000219299 THEMISQ8N1K5 641 aaPredicted RBP12.39□□□□□ -0.43
CCDC113-201ENST00000219299 STAC3Q96MF2 364 aa12.39□□□□□ -0.43
CCDC113-201ENST00000219299 FBXO31Q5XUX0 539 aaPredicted RBP12.39□□□□□ -0.43
CCDC113-201ENST00000219299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC113-201ENST00000219299 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
CCDC113-201ENST00000219299 MAPK8IP3Q9UPT6 1336 aa12.37□□□□□ -0.43
CCDC113-201ENST00000219299 NBPF1Q3BBV0 1214 aa12.37□□□□□ -0.43
CCDC113-201ENST00000219299 SLC26A8Q96RN1 970 aa12.37□□□□□ -0.43
CCDC113-201ENST00000219299 EVC2Q86UK5 1308 aa12.36□□□□□ -0.43
CCDC113-201ENST00000219299 TRAPPC8Q9Y2L5 1435 aa12.35□□□□□ -0.43
CCDC113-201ENST00000219299 DHX29Q7Z478 1369 aaKnown RBP12.35□□□□□ -0.43
CCDC113-201ENST00000219299 PANK3Q9H999 370 aa12.35□□□□□ -0.43
CCDC113-201ENST00000219299 CENPJQ9HC77 1338 aaPredicted RBP12.35□□□□□ -0.43
CCDC113-201ENST00000219299 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
CCDC113-201ENST00000219299 KTN1Q86UP2 1357 aaKnown RBP12.35□□□□□ -0.43
CCDC113-201ENST00000219299 IDI1Q13907 227 aa12.34□□□□□ -0.43
CCDC113-201ENST00000219299 NBPF8Q3BBV2 869 aa12.34□□□□□ -0.43
CCDC113-201ENST00000219299 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
CCDC113-201ENST00000219299 LAS1LQ9Y4W2 734 aaKnown RBP12.33□□□□□ -0.43
CCDC113-201ENST00000219299 TEX14Q8IWB6 1497 aa12.33□□□□□ -0.44
CCDC113-201ENST00000219299 NBR1Q14596 966 aa12.33□□□□□ -0.44
CCDC113-201ENST00000219299 ANKLE2Q86XL3 938 aa12.32□□□□□ -0.44
CCDC113-201ENST00000219299 SYCP2Q9BX26 1530 aa12.31□□□□□ -0.44
CCDC113-201ENST00000219299 U2AF1L5P0DN76 240 aaPredicted RBP12.31□□□□□ -0.44
CCDC113-201ENST00000219299 U2AF1Q01081 240 aaKnown RBP eCLIP12.31□□□□□ -0.44
CCDC113-201ENST00000219299 SAMD9Q5K651 1589 aa12.3□□□□□ -0.44
CCDC113-201ENST00000219299 CHD1O14646 1710 aa12.3□□□□□ -0.44
CCDC113-201ENST00000219299 CSB-PGBD3P0DP91 1061 aa12.3□□□□□ -0.44
CCDC113-201ENST00000219299 IRX6P78412 446 aaPredicted RBP12.29□□□□□ -0.44
CCDC113-201ENST00000219299 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
CCDC113-201ENST00000219299 ZNF518AQ6AHZ1 1483 aa12.29□□□□□ -0.44
CCDC113-201ENST00000219299 RALBP1Q15311 655 aa12.29□□□□□ -0.44
CCDC113-201ENST00000219299 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.29□□□□□ -0.44
CCDC113-201ENST00000219299 CABP2Q9NPB3 220 aa12.29□□□□□ -0.44
CCDC113-201ENST00000219299 PROSER2Q86WR7 435 aaPredicted RBP12.29□□□□□ -0.44
CCDC113-201ENST00000219299 PRAM1Q96QH2 718 aa12.29□□□□□ -0.44
CCDC113-201ENST00000219299 LTV1Q96GA3 475 aaPredicted RBP12.27□□□□□ -0.44
CCDC113-201ENST00000219299 ANKRD30BQ9BXX2 1392 aa12.27□□□□□ -0.45
CCDC113-201ENST00000219299 ATF3P18847 181 aa12.27□□□□□ -0.45
CCDC113-201ENST00000219299 ARXQ96QS3 562 aa12.27□□□□□ -0.45
CCDC113-201ENST00000219299 AMPHP49418 695 aa12.26□□□□□ -0.45
CCDC113-201ENST00000219299 A2MP01023 1474 aa12.26□□□□□ -0.45
CCDC113-201ENST00000219299 CCER2I3L3R5 266 aa12.26□□□□□ -0.45
CCDC113-201ENST00000219299 PSME1Q06323 249 aa12.26□□□□□ -0.45
CCDC113-201ENST00000219299 ERCC6L2Q5T890 1561 aa12.26□□□□□ -0.45
CCDC113-201ENST00000219299 PNNQ9H307 717 aaKnown RBP12.26□□□□□ -0.45
CCDC113-201ENST00000219299 CCDC136Q96JN2 1154 aa12.25□□□□□ -0.45
CCDC113-201ENST00000219299 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
CCDC113-201ENST00000219299 RPGRIP1LQ68CZ1 1315 aa12.25□□□□□ -0.45
CCDC113-201ENST00000219299 NLRP13Q86W25 1043 aa12.25□□□□□ -0.45
CCDC113-201ENST00000219299 KIF7Q2M1P5 1343 aa12.25□□□□□ -0.45
CCDC113-201ENST00000219299 ABCC10Q5T3U5 1492 aa12.25□□□□□ -0.45
CCDC113-201ENST00000219299 UPF2Q9HAU5 1272 aaKnown RBP12.24□□□□□ -0.45
CCDC113-201ENST00000219299 KDM5BQ9UGL1 1544 aa12.24□□□□□ -0.45
CCDC113-201ENST00000219299 COG3Q96JB2 828 aa12.24□□□□□ -0.45
CCDC113-201ENST00000219299 CGNL1Q0VF96 1302 aa12.24□□□□□ -0.45
CCDC113-201ENST00000219299 CCDC9Q9Y3X0 531 aaKnown RBP12.23□□□□□ -0.45
CCDC113-201ENST00000219299 DNAJC5Q9H3Z4 198 aa12.22□□□□□ -0.45
CCDC113-201ENST00000219299 ITSN2Q9NZM3 1697 aa12.21□□□□□ -0.45
CCDC113-201ENST00000219299 PMFBP1Q8TBY8 1022 aa12.21□□□□□ -0.45
CCDC113-201ENST00000219299 ADGRF5Q8IZF2 1346 aa12.21□□□□□ -0.45
CCDC113-201ENST00000219299 PRKRIP1Q9H875 184 aaPredicted RBP12.21□□□□□ -0.46
CCDC113-201ENST00000219299 NUTM2GQ5VZR2 741 aa12.2□□□□□ -0.46
CCDC113-201ENST00000219299 MAGI3Q5TCQ9 1506 aa12.2□□□□□ -0.46
CCDC113-201ENST00000219299 RTF1Q92541 710 aaKnown RBP12.2□□□□□ -0.46
CCDC113-201ENST00000219299 SLC12A5Q9H2X9 1139 aa12.2□□□□□ -0.46
CCDC113-201ENST00000219299 ABCA8O94911 1581 aa12.2□□□□□ -0.46
CCDC113-201ENST00000219299 GGNBP2Q9H3C7 697 aa12.2□□□□□ -0.46
CCDC113-201ENST00000219299 CCDC7Q96M83 1385 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms