RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 GPATCH3Q96I76 525 aa18.58■□□□□ 0.56
NDFIP2-201ENST00000218652 TOMM22Q9NS69 142 aa18.58■□□□□ 0.56
NDFIP2-201ENST00000218652 NUTM2FA1L443 756 aa18.58■□□□□ 0.56
NDFIP2-201ENST00000218652 VSIG10Q8N0Z9 540 aa18.58■□□□□ 0.56
NDFIP2-201ENST00000218652 TERF2IPQ9NYB0 399 aa18.58■□□□□ 0.56
NDFIP2-201ENST00000218652 CHMP4AQ9BY43 222 aa18.58■□□□□ 0.56
NDFIP2-201ENST00000218652 KIF16BQ96L93 1317 aa18.57■□□□□ 0.56
NDFIP2-201ENST00000218652 KIF3BO15066 747 aa18.57■□□□□ 0.56
NDFIP2-201ENST00000218652 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
NDFIP2-201ENST00000218652 ANKRD45Q5TZF3 282 aa18.57■□□□□ 0.56
NDFIP2-201ENST00000218652 GOLGA6L1Q8N7Z2 621 aa18.56■□□□□ 0.56
NDFIP2-201ENST00000218652 EIF4G1Q04637 1599 aaKnown RBP18.56■□□□□ 0.56
NDFIP2-201ENST00000218652 LTV1Q96GA3 475 aaPredicted RBP18.56■□□□□ 0.56
NDFIP2-201ENST00000218652 COG6Q9Y2V7 657 aa18.56■□□□□ 0.56
NDFIP2-201ENST00000218652 HDAC5Q9UQL6 1122 aa18.56■□□□□ 0.56
NDFIP2-201ENST00000218652 DDX11L8A8MPP1 907 aa18.55■□□□□ 0.56
NDFIP2-201ENST00000218652 CENPQQ7L2Z9 268 aaPredicted RBP18.55■□□□□ 0.56
NDFIP2-201ENST00000218652 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
NDFIP2-201ENST00000218652 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.54■□□□□ 0.56
NDFIP2-201ENST00000218652 PRKRIP1Q9H875 184 aaPredicted RBP18.54■□□□□ 0.56
NDFIP2-201ENST00000218652 PHF14O94880 888 aa18.54■□□□□ 0.56
NDFIP2-201ENST00000218652 A0A0U1RQG5 324 aaPredicted RBP18.54■□□□□ 0.56
NDFIP2-201ENST00000218652 TRAK1Q9UPV9 953 aa18.54■□□□□ 0.56
NDFIP2-201ENST00000218652 PANK3Q9H999 370 aa18.53■□□□□ 0.56
NDFIP2-201ENST00000218652 EFCAB2Q5VUJ9 269 aa18.53■□□□□ 0.56
NDFIP2-201ENST00000218652 CRBNQ96SW2 442 aa18.53■□□□□ 0.56
NDFIP2-201ENST00000218652 TRHP20396 242 aaPredicted RBP18.52■□□□□ 0.56
NDFIP2-201ENST00000218652 TPM3P06753 285 aa18.52■□□□□ 0.55
NDFIP2-201ENST00000218652 CCAR2Q8N163 923 aaKnown RBP18.51■□□□□ 0.55
NDFIP2-201ENST00000218652 CCDC9Q9Y3X0 531 aaKnown RBP18.51■□□□□ 0.55
NDFIP2-201ENST00000218652 FMN1Q68DA7 1419 aa18.51■□□□□ 0.55
NDFIP2-201ENST00000218652 PES1O00541 588 aaKnown RBP18.51■□□□□ 0.55
NDFIP2-201ENST00000218652 RSPH6AQ9H0K4 717 aa18.51■□□□□ 0.55
NDFIP2-201ENST00000218652 AMPHP49418 695 aa18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 NGDNQ8NEJ9 315 aaKnown RBP18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 ANKRD30AQ9BXX3 1397 aa18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 KIF3AQ9Y496 699 aa18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 BECN2A8MW95 431 aa18.5■□□□□ 0.55
NDFIP2-201ENST00000218652 MYBBP1AQ9BQG0 1328 aaKnown RBP18.49■□□□□ 0.55
NDFIP2-201ENST00000218652 APAF1O14727 1248 aa18.49■□□□□ 0.55
NDFIP2-201ENST00000218652 LMOD3Q0VAK6 560 aa18.49■□□□□ 0.55
NDFIP2-201ENST00000218652 CECR2Q9BXF3 1484 aa18.48■□□□□ 0.55
NDFIP2-201ENST00000218652 GOLGA6L19H0YKK7 550 aa18.47■□□□□ 0.55
NDFIP2-201ENST00000218652 ZKSCAN2Q63HK3 967 aa18.47■□□□□ 0.55
NDFIP2-201ENST00000218652 H3BQV1 296 aa18.47■□□□□ 0.55
NDFIP2-201ENST00000218652 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
NDFIP2-201ENST00000218652 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
NDFIP2-201ENST00000218652 FAM184AQ8NB25 1140 aa18.46■□□□□ 0.55
NDFIP2-201ENST00000218652 CGNL1Q0VF96 1302 aa18.44■□□□□ 0.54
NDFIP2-201ENST00000218652 EIF3AQ14152 1382 aaKnown RBP18.44■□□□□ 0.54
NDFIP2-201ENST00000218652 FANCIQ9NVI1 1328 aa18.44■□□□□ 0.54
NDFIP2-201ENST00000218652 SKOR2Q2VWA4 1001 aaPredicted RBP18.44■□□□□ 0.54
NDFIP2-201ENST00000218652 ATP6V1DQ9Y5K8 247 aa18.44■□□□□ 0.54
NDFIP2-201ENST00000218652 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
NDFIP2-201ENST00000218652 FAM13BQ9NYF5 915 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 ZBED9Q6R2W3 1325 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 KIF15Q9NS87 1388 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 ANO8Q9HCE9 1232 aaPredicted RBP18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 PHLDB1Q86UU1 1377 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 ERCC6Q03468 1493 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 E9PSI1 815 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 MCTP1Q6DN14 999 aa18.43■□□□□ 0.54
NDFIP2-201ENST00000218652 TDRD9Q8NDG6 1382 aaKnown RBP18.42■□□□□ 0.54
NDFIP2-201ENST00000218652 MARCH6O60337 910 aa18.42■□□□□ 0.54
NDFIP2-201ENST00000218652 CEP89Q96ST8 783 aa18.42■□□□□ 0.54
NDFIP2-201ENST00000218652 GTF2E1P29083 439 aaPredicted RBP18.42■□□□□ 0.54
NDFIP2-201ENST00000218652 TPD52L1Q16890 204 aaPredicted RBP18.4■□□□□ 0.54
NDFIP2-201ENST00000218652 RB1CC1Q8TDY2 1594 aa18.4■□□□□ 0.54
NDFIP2-201ENST00000218652 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.53
NDFIP2-201ENST00000218652 WASHC2CQ9Y4E1 1318 aa18.39■□□□□ 0.53
NDFIP2-201ENST00000218652 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.38■□□□□ 0.53
NDFIP2-201ENST00000218652 DIAPH3Q9NSV4 1193 aa18.38■□□□□ 0.53
NDFIP2-201ENST00000218652 TSR1Q2NL82 804 aaKnown RBP18.38■□□□□ 0.53
NDFIP2-201ENST00000218652 CHMP5Q9NZZ3 219 aa18.38■□□□□ 0.53
NDFIP2-201ENST00000218652 PRM3Q9NNZ6 103 aa18.37■□□□□ 0.53
NDFIP2-201ENST00000218652 DHX57Q6P158 1386 aaKnown RBP18.37■□□□□ 0.53
NDFIP2-201ENST00000218652 VPS53Q5VIR6 699 aa18.37■□□□□ 0.53
NDFIP2-201ENST00000218652 REC8O95072 547 aa18.36■□□□□ 0.53
NDFIP2-201ENST00000218652 WWC1Q8IX03 1113 aa18.36■□□□□ 0.53
NDFIP2-201ENST00000218652 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
NDFIP2-201ENST00000218652 NGEFQ8N5V2 710 aa18.35■□□□□ 0.53
NDFIP2-201ENST00000218652 ANO2Q9NQ90 1003 aa18.35■□□□□ 0.53
NDFIP2-201ENST00000218652 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
NDFIP2-201ENST00000218652 CARMIL2Q6F5E8 1435 aa18.34■□□□□ 0.53
NDFIP2-201ENST00000218652 ZNF771Q7L3S4 317 aaPredicted RBP18.34■□□□□ 0.53
NDFIP2-201ENST00000218652 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
NDFIP2-201ENST00000218652 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
NDFIP2-201ENST00000218652 EIF2S2P20042 333 aaKnown RBP18.33■□□□□ 0.53
NDFIP2-201ENST00000218652 DDX19BQ9UMR2 479 aa18.33■□□□□ 0.52
NDFIP2-201ENST00000218652 AKAP17AQ02040 695 aaKnown RBP18.33■□□□□ 0.52
NDFIP2-201ENST00000218652 CPLX2Q6PUV4 134 aaKnown RBP18.33■□□□□ 0.52
NDFIP2-201ENST00000218652 DZIP1LQ8IYY4 767 aaKnown RBP18.33■□□□□ 0.52
NDFIP2-201ENST00000218652 ABCC8Q09428 1581 aa18.32■□□□□ 0.52
NDFIP2-201ENST00000218652 TEFQ10587 303 aa18.32■□□□□ 0.52
NDFIP2-201ENST00000218652 BICD2Q8TD16 824 aa18.32■□□□□ 0.52
NDFIP2-201ENST00000218652 G3V3G9 751 aa18.32■□□□□ 0.52
NDFIP2-201ENST00000218652 DCAF8Q5TAQ9 597 aa18.32■□□□□ 0.52
NDFIP2-201ENST00000218652 FAM43AQ8N2R8 423 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms