RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 EFCAB2Q5VUJ9 269 aa21.6■■□□□ 1.05
SNAPC1-201ENST00000216294 BCORL1Q5H9F3 1711 aa21.59■■□□□ 1.05
SNAPC1-201ENST00000216294 WDR7Q9Y4E6 1490 aa21.59■■□□□ 1.05
SNAPC1-201ENST00000216294 MAST1Q9Y2H9 1570 aa21.58■■□□□ 1.05
SNAPC1-201ENST00000216294 KDM5DQ9BY66 1539 aa21.58■■□□□ 1.05
SNAPC1-201ENST00000216294 ERICH6Q7L0X2 663 aa21.57■■□□□ 1.04
SNAPC1-201ENST00000216294 SALL2Q9Y467 1007 aaPredicted RBP21.57■■□□□ 1.04
SNAPC1-201ENST00000216294 USP47Q96K76 1375 aa21.56■■□□□ 1.04
SNAPC1-201ENST00000216294 ABCC1P33527 1531 aa21.56■■□□□ 1.04
SNAPC1-201ENST00000216294 TRAPPC8Q9Y2L5 1435 aa21.55■■□□□ 1.04
SNAPC1-201ENST00000216294 DHX29Q7Z478 1369 aaKnown RBP21.55■■□□□ 1.04
SNAPC1-201ENST00000216294 FANCIQ9NVI1 1328 aa21.54■■□□□ 1.04
SNAPC1-201ENST00000216294 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.52■■□□□ 1.04
SNAPC1-201ENST00000216294 FAM135AQ9P2D6 1515 aa21.52■■□□□ 1.04
SNAPC1-201ENST00000216294 PLXNC1O60486 1568 aa21.52■■□□□ 1.04
SNAPC1-201ENST00000216294 ASXL2Q76L83 1435 aa21.51■■□□□ 1.03
SNAPC1-201ENST00000216294 AFAP1Q8N556 730 aa21.49■■□□□ 1.03
SNAPC1-201ENST00000216294 CARD11Q9BXL7 1154 aa21.47■■□□□ 1.03
SNAPC1-201ENST00000216294 ARAP3Q8WWN8 1544 aa21.46■■□□□ 1.03
SNAPC1-201ENST00000216294 DUOX2Q9NRD8 1548 aa21.46■■□□□ 1.03
SNAPC1-201ENST00000216294 POLR1AO95602 1720 aaPredicted RBP21.46■■□□□ 1.03
SNAPC1-201ENST00000216294 UNC13BO14795 1591 aa21.46■■□□□ 1.03
SNAPC1-201ENST00000216294 ST20-MTHFSA0A0A6YYL1 179 aa21.46■■□□□ 1.03
SNAPC1-201ENST00000216294 FANCAO15360 1455 aa21.46■■□□□ 1.03
SNAPC1-201ENST00000216294 ABCA9Q8IUA7 1624 aa21.45■■□□□ 1.02
SNAPC1-201ENST00000216294 TMC1Q8TDI8 760 aa21.44■■□□□ 1.02
SNAPC1-201ENST00000216294 SPAG9O60271 1321 aaKnown RBP21.44■■□□□ 1.02
SNAPC1-201ENST00000216294 PAK3O75914 559 aaPredicted RBP21.44■■□□□ 1.02
SNAPC1-201ENST00000216294 DCAF11Q8TEB1 546 aa21.44■■□□□ 1.02
SNAPC1-201ENST00000216294 NUDCQ9Y266 331 aa21.43■■□□□ 1.02
SNAPC1-201ENST00000216294 ERBINQ96RT1 1412 aa21.42■■□□□ 1.02
SNAPC1-201ENST00000216294 ERICH6BQ5W0A0 696 aa21.42■■□□□ 1.02
SNAPC1-201ENST00000216294 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
SNAPC1-201ENST00000216294 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
SNAPC1-201ENST00000216294 CCDC136Q96JN2 1154 aa21.42■■□□□ 1.02
SNAPC1-201ENST00000216294 NBR1Q14596 966 aa21.41■■□□□ 1.02
SNAPC1-201ENST00000216294 ZFYVE16Q7Z3T8 1539 aa21.4■■□□□ 1.02
SNAPC1-201ENST00000216294 RGL3Q3MIN7 710 aa21.39■■□□□ 1.01
SNAPC1-201ENST00000216294 KDM5CP41229 1560 aa21.38■■□□□ 1.01
SNAPC1-201ENST00000216294 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
SNAPC1-201ENST00000216294 IQGAP3Q86VI3 1631 aa21.38■■□□□ 1.01
SNAPC1-201ENST00000216294 ADGRL1O94910 1474 aa21.37■■□□□ 1.01
SNAPC1-201ENST00000216294 PLA2R1Q13018 1463 aa21.37■■□□□ 1.01
SNAPC1-201ENST00000216294 MAGI2Q86UL8 1455 aa21.37■■□□□ 1.01
SNAPC1-201ENST00000216294 SCAPERQ9BY12 1400 aa21.37■■□□□ 1.01
SNAPC1-201ENST00000216294 RTEL1-TNFRSF6BF6WH68 1400 aa21.36■■□□□ 1.01
SNAPC1-201ENST00000216294 CCDC144AA2RUR9 1427 aa21.35■■□□□ 1.01
SNAPC1-201ENST00000216294 MYT1LQ9UL68 1186 aa21.34■■□□□ 1.01
SNAPC1-201ENST00000216294 UHRF1BP1Q6BDS2 1440 aa21.33■■□□□ 1
SNAPC1-201ENST00000216294 ATP7AQ04656 1500 aa21.32■■□□□ 1
SNAPC1-201ENST00000216294 NBPF1Q3BBV0 1214 aa21.32■■□□□ 1
SNAPC1-201ENST00000216294 INO80Q9ULG1 1556 aaPredicted RBP21.31■■□□□ 1
SNAPC1-201ENST00000216294 SKAP1Q86WV1 359 aa21.3■■□□□ 1
SNAPC1-201ENST00000216294 RALGAPBQ86X10 1494 aa21.29■■□□□ 1
SNAPC1-201ENST00000216294 EXOC6Q8TAG9 804 aa21.29■■□□□ 1
SNAPC1-201ENST00000216294 CD109Q6YHK3 1445 aa21.28■■□□□ 1
SNAPC1-201ENST00000216294 CDCA7LQ96GN5 454 aa21.27■■□□□ 1
SNAPC1-201ENST00000216294 NOP58Q9Y2X3 529 aaKnown RBP21.27■■□□□ 1
SNAPC1-201ENST00000216294 NPM2Q86SE8 214 aaKnown RBP21.27■■□□□ 1
SNAPC1-201ENST00000216294 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
SNAPC1-201ENST00000216294 ROCK2O75116 1388 aaKnown RBP21.25■□□□□ 0.99
SNAPC1-201ENST00000216294 RNF123Q5XPI4 1314 aa21.25■□□□□ 0.99
SNAPC1-201ENST00000216294 PLIN1O60240 522 aa21.24■□□□□ 0.99
SNAPC1-201ENST00000216294 KIF3BO15066 747 aa21.23■□□□□ 0.99
SNAPC1-201ENST00000216294 A2MP01023 1474 aa21.23■□□□□ 0.99
SNAPC1-201ENST00000216294 DEKP35659 375 aaKnown RBP21.22■□□□□ 0.99
SNAPC1-201ENST00000216294 ATP10AO60312 1499 aa21.21■□□□□ 0.99
SNAPC1-201ENST00000216294 MYBBP1AQ9BQG0 1328 aaKnown RBP21.21■□□□□ 0.99
SNAPC1-201ENST00000216294 PRAG1Q86YV5 1406 aa21.2■□□□□ 0.98
SNAPC1-201ENST00000216294 ZNF518AQ6AHZ1 1483 aa21.2■□□□□ 0.98
SNAPC1-201ENST00000216294 CYB5RLQ6IPT4 315 aa21.2■□□□□ 0.98
SNAPC1-201ENST00000216294 DEPDC5O75140 1603 aa21.2■□□□□ 0.98
SNAPC1-201ENST00000216294 E9PCH4 1651 aa21.2■□□□□ 0.98
SNAPC1-201ENST00000216294 KIDINS220Q9ULH0 1771 aa21.19■□□□□ 0.98
SNAPC1-201ENST00000216294 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
SNAPC1-201ENST00000216294 LRPPRCP42704 1394 aaKnown RBP21.17■□□□□ 0.98
SNAPC1-201ENST00000216294 POGZQ7Z3K3 1410 aa21.17■□□□□ 0.98
SNAPC1-201ENST00000216294 RCAN3Q9UKA8 241 aa21.16■□□□□ 0.98
SNAPC1-201ENST00000216294 KANK1Q14678 1352 aa21.16■□□□□ 0.98
SNAPC1-201ENST00000216294 CFAP74Q9C0B2 1584 aa21.14■□□□□ 0.98
SNAPC1-201ENST00000216294 ARID4BQ4LE39 1312 aaPredicted RBP21.14■□□□□ 0.98
SNAPC1-201ENST00000216294 MROH1Q8NDA8 1641 aa21.14■□□□□ 0.97
SNAPC1-201ENST00000216294 TRPM1Q7Z4N2 1603 aa21.14■□□□□ 0.97
SNAPC1-201ENST00000216294 VWDEQ8N2E2 1590 aa21.14■□□□□ 0.97
SNAPC1-201ENST00000216294 ANP32AP39687 249 aaKnown RBP21.13■□□□□ 0.97
SNAPC1-201ENST00000216294 EIF2AK4Q9P2K8 1649 aaKnown RBP21.13■□□□□ 0.97
SNAPC1-201ENST00000216294 PRDM15P57071 1507 aaPredicted RBP21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 BRD4O60885 1362 aaPredicted RBP21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 DISP3Q9P2K9 1392 aa21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 TRPM2O94759 1503 aa21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 RALBP1Q15311 655 aa21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 IPO9Q96P70 1041 aaKnown RBP21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 TET3O43151 1660 aa21.12■□□□□ 0.97
SNAPC1-201ENST00000216294 PANK3Q9H999 370 aa21.11■□□□□ 0.97
SNAPC1-201ENST00000216294 PTPRTO14522 1441 aa21.11■□□□□ 0.97
SNAPC1-201ENST00000216294 PER1O15534 1290 aaPredicted RBP21.11■□□□□ 0.97
SNAPC1-201ENST00000216294 RAPGEF3O95398 923 aa21.11■□□□□ 0.97
SNAPC1-201ENST00000216294 SPHKAPQ2M3C7 1700 aa21.09■□□□□ 0.97
SNAPC1-201ENST00000216294 RIMBP3CA6NJZ7 1639 aa21.09■□□□□ 0.97
SNAPC1-201ENST00000216294 RIMBP3BA6NNM3 1639 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms