RNA–Protein interactions for RNA: ENST00000204005.13

LTBP4-201, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP4, Length 5,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-201ENST00000204005 GOLGA2Q08379 1002 aa24.34■■□□□ 1.49
LTBP4-201ENST00000204005 ARHGAP5Q13017 1502 aa24.34■■□□□ 1.49
LTBP4-201ENST00000204005 TROQ12816 1431 aaPredicted RBP24.33■■□□□ 1.49
LTBP4-201ENST00000204005 TIAM1Q13009 1591 aa24.32■■□□□ 1.48
LTBP4-201ENST00000204005 EVC2Q86UK5 1308 aa24.32■■□□□ 1.48
LTBP4-201ENST00000204005 NGDNQ8NEJ9 315 aaKnown RBP24.32■■□□□ 1.48
LTBP4-201ENST00000204005 KIAA0586Q9BVV6 1533 aa24.31■■□□□ 1.48
LTBP4-201ENST00000204005 OS9Q13438 667 aaPredicted RBP24.3■■□□□ 1.48
LTBP4-201ENST00000204005 TRIM44Q96DX7 344 aaPredicted RBP24.3■■□□□ 1.48
LTBP4-201ENST00000204005 ZBED9Q6R2W3 1325 aa24.3■■□□□ 1.48
LTBP4-201ENST00000204005 AFAP1Q8N556 730 aa24.29■■□□□ 1.48
LTBP4-201ENST00000204005 HECW1Q76N89 1606 aa24.29■■□□□ 1.48
LTBP4-201ENST00000204005 CCDC146Q8IYE0 955 aa24.26■■□□□ 1.47
LTBP4-201ENST00000204005 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.25■■□□□ 1.47
LTBP4-201ENST00000204005 CGNL1Q0VF96 1302 aa24.25■■□□□ 1.47
LTBP4-201ENST00000204005 IPO9Q96P70 1041 aaKnown RBP24.25■■□□□ 1.47
LTBP4-201ENST00000204005 DNAJC5BQ9UF47 199 aa24.25■■□□□ 1.47
LTBP4-201ENST00000204005 NCLP19338 710 aaKnown RBP24.24■■□□□ 1.47
LTBP4-201ENST00000204005 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
LTBP4-201ENST00000204005 RTN4Q9NQC3 1192 aaKnown RBP24.22■■□□□ 1.47
LTBP4-201ENST00000204005 HFM1A2PYH4 1435 aa24.21■■□□□ 1.47
LTBP4-201ENST00000204005 CHMP4AQ9BY43 222 aa24.21■■□□□ 1.47
LTBP4-201ENST00000204005 NUTM2FA1L443 756 aa24.21■■□□□ 1.47
LTBP4-201ENST00000204005 C9orf84Q5VXU9 1444 aa24.21■■□□□ 1.47
LTBP4-201ENST00000204005 CSB-PGBD3P0DP91 1061 aa24.21■■□□□ 1.47
LTBP4-201ENST00000204005 CCDC7Q96M83 1385 aa24.21■■□□□ 1.47
LTBP4-201ENST00000204005 LMOD3Q0VAK6 560 aa24.2■■□□□ 1.46
LTBP4-201ENST00000204005 MINK1Q8N4C8 1332 aaPredicted RBP24.19■■□□□ 1.46
LTBP4-201ENST00000204005 UNC13AQ9UPW8 1703 aa24.19■■□□□ 1.46
LTBP4-201ENST00000204005 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.19■■□□□ 1.462e-6■■■■□ 20.4
LTBP4-201ENST00000204005 CUL7Q14999 1698 aa24.19■■□□□ 1.46
LTBP4-201ENST00000204005 IQGAP2Q13576 1575 aa24.18■■□□□ 1.46
LTBP4-201ENST00000204005 KIF7Q2M1P5 1343 aa24.18■■□□□ 1.46
LTBP4-201ENST00000204005 AMPHP49418 695 aa24.18■■□□□ 1.46
LTBP4-201ENST00000204005 RWDD1Q9H446 243 aaPredicted RBP24.18■■□□□ 1.46
LTBP4-201ENST00000204005 ITPRIPQ8IWB1 547 aa24.17■■□□□ 1.46
LTBP4-201ENST00000204005 CENPJQ9HC77 1338 aaPredicted RBP24.17■■□□□ 1.46
LTBP4-201ENST00000204005 SMC4Q9NTJ3 1288 aa24.17■■□□□ 1.46
LTBP4-201ENST00000204005 EPRSP07814 1512 aaKnown RBP24.17■■□□□ 1.46
LTBP4-201ENST00000204005 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.16■■□□□ 1.466e-7■□□□□ 8.6
LTBP4-201ENST00000204005 CFAP44Q96MT7 982 aa24.14■■□□□ 1.45
LTBP4-201ENST00000204005 SUPT6HQ7KZ85 1726 aaKnown RBP24.14■■□□□ 1.45
LTBP4-201ENST00000204005 COG3Q96JB2 828 aa24.13■■□□□ 1.45
LTBP4-201ENST00000204005 STK31Q9BXU1 1019 aa24.13■■□□□ 1.45
LTBP4-201ENST00000204005 FANCIQ9NVI1 1328 aa24.13■■□□□ 1.45
LTBP4-201ENST00000204005 HSP90AB1P08238 724 aaKnown RBP24.12■■□□□ 1.45
LTBP4-201ENST00000204005 KIAA1107Q9UPP5 1409 aa24.11■■□□□ 1.45
LTBP4-201ENST00000204005 DAPK1P53355 1430 aa24.11■■□□□ 1.45
LTBP4-201ENST00000204005 NPHP1O15259 732 aa24.11■■□□□ 1.45
LTBP4-201ENST00000204005 URB2Q14146 1524 aaKnown RBP24.1■■□□□ 1.45
LTBP4-201ENST00000204005 PMFBP1Q8TBY8 1022 aa24.1■■□□□ 1.45
LTBP4-201ENST00000204005 CNTLNQ9NXG0 1405 aa24.1■■□□□ 1.45
LTBP4-201ENST00000204005 HSCBQ8IWL3 235 aa24.1■■□□□ 1.45
LTBP4-201ENST00000204005 CDK13Q14004 1512 aaKnown RBP24.1■■□□□ 1.45
LTBP4-201ENST00000204005 KCNJ4P48050 445 aa24.08■■□□□ 1.45
LTBP4-201ENST00000204005 RRP7AQ9Y3A4 280 aaKnown RBP24.08■■□□□ 1.44
LTBP4-201ENST00000204005 MAGI1Q96QZ7 1491 aaPredicted RBP24.07■■□□□ 1.44
LTBP4-201ENST00000204005 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
LTBP4-201ENST00000204005 RRP1P56182 461 aaKnown RBP24.06■■□□□ 1.44
LTBP4-201ENST00000204005 PCF11O94913 1555 aaKnown RBP24.06■■□□□ 1.44
LTBP4-201ENST00000204005 GRIN2AQ12879 1464 aa24.06■■□□□ 1.44
LTBP4-201ENST00000204005 CLUAP1Q96AJ1 413 aa24.05■■□□□ 1.44
LTBP4-201ENST00000204005 WASHC2AQ641Q2 1341 aa24.05■■□□□ 1.44
LTBP4-201ENST00000204005 NGEFQ8N5V2 710 aa24.05■■□□□ 1.44
LTBP4-201ENST00000204005 SCAPERQ9BY12 1400 aa24.05■■□□□ 1.44
LTBP4-201ENST00000204005 E9PSI1 815 aa24.05■■□□□ 1.44
LTBP4-201ENST00000204005 LTV1Q96GA3 475 aaPredicted RBP24.04■■□□□ 1.44
LTBP4-201ENST00000204005 L1TD1Q5T7N2 865 aaKnown RBP24.04■■□□□ 1.44
LTBP4-201ENST00000204005 MAP3K1Q13233 1512 aa24.03■■□□□ 1.44
LTBP4-201ENST00000204005 APBB1O00213 710 aa24.03■■□□□ 1.44
LTBP4-201ENST00000204005 ROCK1Q13464 1354 aa24.02■■□□□ 1.44
LTBP4-201ENST00000204005 MCCP23508 829 aa24.02■■□□□ 1.44
LTBP4-201ENST00000204005 FGD1P98174 961 aa24.02■■□□□ 1.44
LTBP4-201ENST00000204005 EXOC6Q8TAG9 804 aa24.01■■□□□ 1.43
LTBP4-201ENST00000204005 APAF1O14727 1248 aa24.01■■□□□ 1.43
LTBP4-201ENST00000204005 CFAP70Q5T0N1 1121 aa24■■□□□ 1.43
LTBP4-201ENST00000204005 NAIPQ13075 1403 aa24■■□□□ 1.43
LTBP4-201ENST00000204005 PDE4AP27815 886 aa23.99■■□□□ 1.43
LTBP4-201ENST00000204005 HDAC5Q9UQL6 1122 aa23.99■■□□□ 1.43
LTBP4-201ENST00000204005 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
LTBP4-201ENST00000204005 DIAPH1O60610 1272 aaKnown RBP23.98■■□□□ 1.43
LTBP4-201ENST00000204005 HMMRO75330 724 aa23.97■■□□□ 1.43
LTBP4-201ENST00000204005 SPRYD3Q8NCJ5 442 aa23.97■■□□□ 1.43
LTBP4-201ENST00000204005 PTMAP06454 111 aaKnown RBP23.96■■□□□ 1.43
LTBP4-201ENST00000204005 NAP1L5Q96NT1 182 aaPredicted RBP23.96■■□□□ 1.43
LTBP4-201ENST00000204005 PLB1Q6P1J6 1458 aa23.96■■□□□ 1.43
LTBP4-201ENST00000204005 NBPF8Q3BBV2 869 aa23.95■■□□□ 1.43
LTBP4-201ENST00000204005 CENPQQ7L2Z9 268 aaPredicted RBP23.95■■□□□ 1.42
LTBP4-201ENST00000204005 ZRSR1Q15695 479 aaKnown RBP23.93■■□□□ 1.42
LTBP4-201ENST00000204005 SLKQ9H2G2 1235 aaPredicted RBP23.93■■□□□ 1.42
LTBP4-201ENST00000204005 PLIN1O60240 522 aa23.93■■□□□ 1.42
LTBP4-201ENST00000204005 NBPF1Q3BBV0 1214 aa23.93■■□□□ 1.42
LTBP4-201ENST00000204005 SLC4A10Q6U841 1118 aa23.93■■□□□ 1.42
LTBP4-201ENST00000204005 ARHGEF11O15085 1522 aa23.92■■□□□ 1.42
LTBP4-201ENST00000204005 USP35Q9P2H5 1018 aa23.92■■□□□ 1.42
LTBP4-201ENST00000204005 ZNF330Q9Y3S2 320 aaPredicted RBP23.91■■□□□ 1.42
LTBP4-201ENST00000204005 ZNF608Q9ULD9 1512 aaPredicted RBP23.91■■□□□ 1.42
LTBP4-201ENST00000204005 CRBNQ96SW2 442 aa23.9■■□□□ 1.42
LTBP4-201ENST00000204005 CCDC141Q6ZP82 1450 aa23.9■■□□□ 1.42
LTBP4-201ENST00000204005 BRD4O60885 1362 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms