RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 TPM1P09493 284 aa21.23■□□□□ 0.99
ITGB4-201ENST00000200181 SKOR2Q2VWA4 1001 aaPredicted RBP21.23■□□□□ 0.99
ITGB4-201ENST00000200181 BECN2A8MW95 431 aa21.23■□□□□ 0.99
ITGB4-201ENST00000200181 TPM2P07951 284 aa21.23■□□□□ 0.99
ITGB4-201ENST00000200181 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
ITGB4-201ENST00000200181 ANO8Q9HCE9 1232 aaPredicted RBP21.22■□□□□ 0.99
ITGB4-201ENST00000200181 PKD2Q13563 968 aa21.21■□□□□ 0.99
ITGB4-201ENST00000200181 FAM184AQ8NB25 1140 aa21.2■□□□□ 0.98
ITGB4-201ENST00000200181 ATP6V1DQ9Y5K8 247 aa21.2■□□□□ 0.98
ITGB4-201ENST00000200181 GSE1Q14687 1217 aa21.19■□□□□ 0.98
ITGB4-201ENST00000200181 ZNF592Q92610 1267 aa21.19■□□□□ 0.98
ITGB4-201ENST00000200181 CCDC146Q8IYE0 955 aa21.19■□□□□ 0.98
ITGB4-201ENST00000200181 G3V3G9 751 aa21.19■□□□□ 0.98
ITGB4-201ENST00000200181 DCAF8Q5TAQ9 597 aa21.19■□□□□ 0.98
ITGB4-201ENST00000200181 SLC4A3P48751 1232 aa21.18■□□□□ 0.98
ITGB4-201ENST00000200181 EIF3AQ14152 1382 aaKnown RBP21.17■□□□□ 0.98
ITGB4-201ENST00000200181 PDE3BQ13370 1112 aa21.16■□□□□ 0.98
ITGB4-201ENST00000200181 LMOD3Q0VAK6 560 aa21.16■□□□□ 0.98
ITGB4-201ENST00000200181 CHMP4CQ96CF2 233 aa21.16■□□□□ 0.98
ITGB4-201ENST00000200181 TEX35Q5T0J7 233 aa21.16■□□□□ 0.98
ITGB4-201ENST00000200181 FOXD1Q16676 465 aa21.15■□□□□ 0.98
ITGB4-201ENST00000200181 FRAT2O75474 233 aaPredicted RBP21.14■□□□□ 0.98
ITGB4-201ENST00000200181 FOXD4L6Q3SYB3 417 aaPredicted RBP21.14■□□□□ 0.97
ITGB4-201ENST00000200181 FOXD4L3Q6VB84 417 aaPredicted RBP21.14■□□□□ 0.97
ITGB4-201ENST00000200181 RILPL2Q969X0 211 aa21.14■□□□□ 0.97
ITGB4-201ENST00000200181 GGT6Q6P531 493 aa21.13■□□□□ 0.97
ITGB4-201ENST00000200181 FAM13BQ9NYF5 915 aa21.13■□□□□ 0.97
ITGB4-201ENST00000200181 FAM161AQ3B820 660 aa21.13■□□□□ 0.97
ITGB4-201ENST00000200181 AKAP17AQ02040 695 aaKnown RBP21.13■□□□□ 0.97
ITGB4-201ENST00000200181 ARHGAP35Q9NRY4 1499 aa21.12■□□□□ 0.97
ITGB4-201ENST00000200181 CENPQQ7L2Z9 268 aaPredicted RBP21.11■□□□□ 0.97
ITGB4-201ENST00000200181 WWC1Q8IX03 1113 aa21.1■□□□□ 0.97
ITGB4-201ENST00000200181 PCMTD1Q96MG8 357 aaPredicted RBP21.1■□□□□ 0.97
ITGB4-201ENST00000200181 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
ITGB4-201ENST00000200181 IPO7O95373 1038 aaKnown RBP21.1■□□□□ 0.97
ITGB4-201ENST00000200181 TERF2IPQ9NYB0 399 aa21.1■□□□□ 0.97
ITGB4-201ENST00000200181 MCTP1Q6DN14 999 aa21.09■□□□□ 0.97
ITGB4-201ENST00000200181 PDE4AP27815 886 aa21.09■□□□□ 0.97
ITGB4-201ENST00000200181 RRP12Q5JTH9 1297 aaKnown RBP21.08■□□□□ 0.97
ITGB4-201ENST00000200181 NLRP13Q86W25 1043 aa21.08■□□□□ 0.96
ITGB4-201ENST00000200181 ANKRD45Q5TZF3 282 aa21.07■□□□□ 0.96
ITGB4-201ENST00000200181 FBXO3Q9UK99 471 aa21.07■□□□□ 0.96
ITGB4-201ENST00000200181 SYNE3Q6ZMZ3 975 aa21.06■□□□□ 0.96
ITGB4-201ENST00000200181 HOMER1Q86YM7 354 aa21.06■□□□□ 0.96
ITGB4-201ENST00000200181 PHLDB1Q86UU1 1377 aa21.06■□□□□ 0.96
ITGB4-201ENST00000200181 ANKRD20A12PQ8NF67 263 aa21.05■□□□□ 0.96
ITGB4-201ENST00000200181 CCDC9Q9Y3X0 531 aaKnown RBP21.05■□□□□ 0.96
ITGB4-201ENST00000200181 MPHOSPH9Q99550 1183 aa21.04■□□□□ 0.96
ITGB4-201ENST00000200181 CCDC47Q96A33 483 aaKnown RBP21.03■□□□□ 0.96
ITGB4-201ENST00000200181 GTF2E1P29083 439 aaPredicted RBP21.03■□□□□ 0.96
ITGB4-201ENST00000200181 TRIM29Q14134 588 aa21.02■□□□□ 0.96
ITGB4-201ENST00000200181 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.02■□□□□ 0.96
ITGB4-201ENST00000200181 AMPHP49418 695 aa21.02■□□□□ 0.96
ITGB4-201ENST00000200181 DIAPH3Q9NSV4 1193 aa21.02■□□□□ 0.96
ITGB4-201ENST00000200181 CPLX2Q6PUV4 134 aaKnown RBP21.01■□□□□ 0.95
ITGB4-201ENST00000200181 RUFY1Q96T51 708 aa21.01■□□□□ 0.95
ITGB4-201ENST00000200181 NOM1Q5C9Z4 860 aaKnown RBP21■□□□□ 0.95
ITGB4-201ENST00000200181 AK7Q96M32 723 aa21■□□□□ 0.95
ITGB4-201ENST00000200181 NUP155O75694 1391 aa21■□□□□ 0.95
ITGB4-201ENST00000200181 BAZ1BQ9UIG0 1483 aaKnown RBP21■□□□□ 0.95
ITGB4-201ENST00000200181 CDR1P51861 262 aa21■□□□□ 0.95
ITGB4-201ENST00000200181 TCEAL9Q9UHQ7 104 aa20.99■□□□□ 0.95
ITGB4-201ENST00000200181 RRP7AQ9Y3A4 280 aaKnown RBP20.99■□□□□ 0.95
ITGB4-201ENST00000200181 HOOK1Q9UJC3 728 aaKnown RBP20.99■□□□□ 0.95
ITGB4-201ENST00000200181 BICD2Q8TD16 824 aa20.98■□□□□ 0.95
ITGB4-201ENST00000200181 ARGLU1Q9NWB6 273 aaPredicted RBP20.98■□□□□ 0.95
ITGB4-201ENST00000200181 RUFY2Q8WXA3 655 aa20.97■□□□□ 0.95
ITGB4-201ENST00000200181 LTV1Q96GA3 475 aaPredicted RBP20.97■□□□□ 0.95
ITGB4-201ENST00000200181 ACBD3Q9H3P7 528 aa20.97■□□□□ 0.95
ITGB4-201ENST00000200181 RAB3GAP2Q9H2M9 1393 aa20.97■□□□□ 0.95
ITGB4-201ENST00000200181 ZKSCAN2Q63HK3 967 aa20.97■□□□□ 0.95
ITGB4-201ENST00000200181 ANO2Q9NQ90 1003 aa20.97■□□□□ 0.95
ITGB4-201ENST00000200181 LRRFIP1Q32MZ4 808 aaKnown RBP20.97■□□□□ 0.95
ITGB4-201ENST00000200181 NGDNQ8NEJ9 315 aaKnown RBP20.96■□□□□ 0.95
ITGB4-201ENST00000200181 KIF15Q9NS87 1388 aa20.96■□□□□ 0.95
ITGB4-201ENST00000200181 REC8O95072 547 aa20.96■□□□□ 0.95
ITGB4-201ENST00000200181 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
ITGB4-201ENST00000200181 MNS1Q8NEH6 495 aa20.95■□□□□ 0.94
ITGB4-201ENST00000200181 BCL2L13Q9BXK5 485 aa20.95■□□□□ 0.94
ITGB4-201ENST00000200181 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.95■□□□□ 0.94
ITGB4-201ENST00000200181 MYBBP1AQ9BQG0 1328 aaKnown RBP20.95■□□□□ 0.94
ITGB4-201ENST00000200181 FAM43AQ8N2R8 423 aa20.94■□□□□ 0.94
ITGB4-201ENST00000200181 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.94■□□□□ 0.94
ITGB4-201ENST00000200181 PLIN1O60240 522 aa20.94■□□□□ 0.94
ITGB4-201ENST00000200181 TRHP20396 242 aaPredicted RBP20.94■□□□□ 0.94
ITGB4-201ENST00000200181 AMOTL1Q8IY63 956 aa20.94■□□□□ 0.94
ITGB4-201ENST00000200181 CRBNQ96SW2 442 aa20.94■□□□□ 0.94
ITGB4-201ENST00000200181 CARMIL1Q5VZK9 1371 aa20.94■□□□□ 0.94
ITGB4-201ENST00000200181 EXOC6Q8TAG9 804 aa20.93■□□□□ 0.94
ITGB4-201ENST00000200181 CHMP5Q9NZZ3 219 aa20.93■□□□□ 0.94
ITGB4-201ENST00000200181 CPLX1O14810 134 aa20.93■□□□□ 0.94
ITGB4-201ENST00000200181 RRP1P56182 461 aaKnown RBP20.93■□□□□ 0.94
ITGB4-201ENST00000200181 SASS6Q6UVJ0 657 aa20.93■□□□□ 0.94
ITGB4-201ENST00000200181 ANKRD30AQ9BXX3 1397 aa20.92■□□□□ 0.94
ITGB4-201ENST00000200181 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
ITGB4-201ENST00000200181 BCL11BQ9C0K0 894 aaPredicted RBP20.92■□□□□ 0.94
ITGB4-201ENST00000200181 IFT57Q9NWB7 429 aa20.92■□□□□ 0.94
ITGB4-201ENST00000200181 ERCC6Q03468 1493 aa20.92■□□□□ 0.94
ITGB4-201ENST00000200181 E9PSI1 815 aa20.91■□□□□ 0.94
ITGB4-201ENST00000200181 HSP90B2PQ58FF3 399 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms