RNA–Protein interactions for RNA: ENST00000164139.3

PYGM-201, Transcript of glycogen phosphorylase, muscle associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGM, Length 3,198 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGM-201ENST00000164139 DCAF11Q8TEB1 546 aa17.08■□□□□ 0.32
PYGM-201ENST00000164139 ITSN2Q9NZM3 1697 aa17.07■□□□□ 0.32
PYGM-201ENST00000164139 RALGAPBQ86X10 1494 aa17.07■□□□□ 0.32
PYGM-201ENST00000164139 JPH4Q96JJ6 628 aa17.06■□□□□ 0.32
PYGM-201ENST00000164139 CHD1O14646 1710 aa17.06■□□□□ 0.32
PYGM-201ENST00000164139 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
PYGM-201ENST00000164139 UHRF1BP1Q6BDS2 1440 aa17.06■□□□□ 0.32
PYGM-201ENST00000164139 RALBP1Q15311 655 aa17.04■□□□□ 0.32
PYGM-201ENST00000164139 UBE2Q2Q8WVN8 375 aa17.04■□□□□ 0.32
PYGM-201ENST00000164139 BRD4O60885 1362 aaPredicted RBP17.04■□□□□ 0.32
PYGM-201ENST00000164139 TSPY4P0CV99 314 aa17.03■□□□□ 0.32
PYGM-201ENST00000164139 TSPY10P0CW01 314 aa17.03■□□□□ 0.32
PYGM-201ENST00000164139 ADCY10Q96PN6 1610 aa17.03■□□□□ 0.32
PYGM-201ENST00000164139 PLEKHD1A6NEE1 506 aa17.03■□□□□ 0.32
PYGM-201ENST00000164139 LRPPRCP42704 1394 aaKnown RBP17.03■□□□□ 0.32
PYGM-201ENST00000164139 RRP1P56182 461 aaKnown RBP17.03■□□□□ 0.32
PYGM-201ENST00000164139 EXOC6Q8TAG9 804 aa17.03■□□□□ 0.32
PYGM-201ENST00000164139 SLC4A3P48751 1232 aa17.02■□□□□ 0.31
PYGM-201ENST00000164139 CROCC2H7BZ55 1655 aa17.02■□□□□ 0.31
PYGM-201ENST00000164139 C9orf84Q5VXU9 1444 aa17.02■□□□□ 0.31
PYGM-201ENST00000164139 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
PYGM-201ENST00000164139 ABCA8O94911 1581 aa17■□□□□ 0.31
PYGM-201ENST00000164139 HNRNPMP52272 730 aaKnown RBP eCLIP16.99■□□□□ 0.31
PYGM-201ENST00000164139 DAXXQ9UER7 740 aaPredicted RBP16.99■□□□□ 0.31
PYGM-201ENST00000164139 SHROOM2Q13796 1616 aa16.99■□□□□ 0.31
PYGM-201ENST00000164139 ARHGEF12Q9NZN5 1544 aa16.98■□□□□ 0.31
PYGM-201ENST00000164139 KTN1Q86UP2 1357 aaKnown RBP16.97■□□□□ 0.31
PYGM-201ENST00000164139 PDE4AP27815 886 aa16.97■□□□□ 0.31
PYGM-201ENST00000164139 SKAP1Q86WV1 359 aa16.97■□□□□ 0.31
PYGM-201ENST00000164139 CARMIL2Q6F5E8 1435 aa16.97■□□□□ 0.31
PYGM-201ENST00000164139 NLRP13Q86W25 1043 aa16.97■□□□□ 0.31
PYGM-201ENST00000164139 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
PYGM-201ENST00000164139 PPM1GO15355 546 aaPredicted RBP16.96■□□□□ 0.31
PYGM-201ENST00000164139 CDCA7LQ96GN5 454 aa16.94■□□□□ 0.3
PYGM-201ENST00000164139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.94■□□□□ 0.3
PYGM-201ENST00000164139 GSE1Q14687 1217 aa16.93■□□□□ 0.3
PYGM-201ENST00000164139 NBPF1Q3BBV0 1214 aa16.93■□□□□ 0.3
PYGM-201ENST00000164139 TCERG1O14776 1098 aaKnown RBP16.93■□□□□ 0.3
PYGM-201ENST00000164139 SHANK2Q9UPX8 1470 aa16.93■□□□□ 0.3
PYGM-201ENST00000164139 CC2D1BQ5T0F9 858 aaKnown RBP16.92■□□□□ 0.3
PYGM-201ENST00000164139 CDC42BPAQ5VT25 1732 aa16.92■□□□□ 0.3
PYGM-201ENST00000164139 PDE3BQ13370 1112 aa16.91■□□□□ 0.3
PYGM-201ENST00000164139 USP35Q9P2H5 1018 aa16.91■□□□□ 0.3
PYGM-201ENST00000164139 ABCC10Q5T3U5 1492 aa16.91■□□□□ 0.3
PYGM-201ENST00000164139 FRAT1Q92837 279 aaPredicted RBP16.91■□□□□ 0.3
PYGM-201ENST00000164139 PARD3Q8TEW0 1356 aa16.91■□□□□ 0.3
PYGM-201ENST00000164139 PLIN1O60240 522 aa16.9■□□□□ 0.3
PYGM-201ENST00000164139 ATP10BO94823 1461 aa16.9■□□□□ 0.3
PYGM-201ENST00000164139 KDM5DQ9BY66 1539 aa16.9■□□□□ 0.3
PYGM-201ENST00000164139 ARXQ96QS3 562 aa16.89■□□□□ 0.29
PYGM-201ENST00000164139 PER1O15534 1290 aaPredicted RBP16.88■□□□□ 0.29
PYGM-201ENST00000164139 PTPRGP23470 1445 aa16.88■□□□□ 0.29
PYGM-201ENST00000164139 CCDC144AA2RUR9 1427 aa16.88■□□□□ 0.29
PYGM-201ENST00000164139 E9PCH4 1651 aa16.88■□□□□ 0.29
PYGM-201ENST00000164139 NFKBIBQ15653 356 aa16.87■□□□□ 0.29
PYGM-201ENST00000164139 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
PYGM-201ENST00000164139 BACH2Q9BYV9 841 aa16.85■□□□□ 0.29
PYGM-201ENST00000164139 PANK3Q9H999 370 aa16.85■□□□□ 0.29
PYGM-201ENST00000164139 FAM135AQ9P2D6 1515 aa16.85■□□□□ 0.29
PYGM-201ENST00000164139 WASHC2CQ9Y4E1 1318 aa16.84■□□□□ 0.29
PYGM-201ENST00000164139 CRBNQ96SW2 442 aa16.84■□□□□ 0.29
PYGM-201ENST00000164139 DISP3Q9P2K9 1392 aa16.83■□□□□ 0.28
PYGM-201ENST00000164139 MS4A1P11836 297 aa16.83■□□□□ 0.28
PYGM-201ENST00000164139 CLASP1Q7Z460 1538 aa16.82■□□□□ 0.28
PYGM-201ENST00000164139 TESK2Q96S53 571 aa16.81■□□□□ 0.28
PYGM-201ENST00000164139 TRPM1Q7Z4N2 1603 aa16.81■□□□□ 0.28
PYGM-201ENST00000164139 CCDC141Q6ZP82 1450 aa16.81■□□□□ 0.28
PYGM-201ENST00000164139 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
PYGM-201ENST00000164139 ERCC6L2Q5T890 1561 aa16.79■□□□□ 0.28
PYGM-201ENST00000164139 TMF1P82094 1093 aa16.79■□□□□ 0.28
PYGM-201ENST00000164139 A2MP01023 1474 aa16.79■□□□□ 0.28
PYGM-201ENST00000164139 COL17A1Q9UMD9 1497 aaPredicted RBP16.79■□□□□ 0.28
PYGM-201ENST00000164139 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
PYGM-201ENST00000164139 ERBINQ96RT1 1412 aa16.78■□□□□ 0.28
PYGM-201ENST00000164139 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
PYGM-201ENST00000164139 PLA2R1Q13018 1463 aa16.77■□□□□ 0.28
PYGM-201ENST00000164139 RSPH4AQ5TD94 716 aa16.77■□□□□ 0.28
PYGM-201ENST00000164139 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.27
PYGM-201ENST00000164139 BLMP54132 1417 aaPredicted RBP16.77■□□□□ 0.27
PYGM-201ENST00000164139 FRAT2O75474 233 aaPredicted RBP16.76■□□□□ 0.27
PYGM-201ENST00000164139 PKNOX2Q96KN3 472 aa16.76■□□□□ 0.27
PYGM-201ENST00000164139 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
PYGM-201ENST00000164139 SAMD9LQ8IVG5 1584 aa16.76■□□□□ 0.27
PYGM-201ENST00000164139 CDC42BPBQ9Y5S2 1711 aa16.74■□□□□ 0.27
PYGM-201ENST00000164139 PREX2Q70Z35 1606 aa16.73■□□□□ 0.27
PYGM-201ENST00000164139 PRDM15P57071 1507 aaPredicted RBP16.72■□□□□ 0.27
PYGM-201ENST00000164139 WDR43Q15061 677 aaKnown RBP eCLIP16.72■□□□□ 0.27
PYGM-201ENST00000164139 RSPH6AQ9H0K4 717 aa16.72■□□□□ 0.27
PYGM-201ENST00000164139 SYCP2Q9BX26 1530 aa16.72■□□□□ 0.27
PYGM-201ENST00000164139 ABCC2Q92887 1545 aa16.71■□□□□ 0.27
PYGM-201ENST00000164139 KNSTRNQ9Y448 316 aa16.71■□□□□ 0.27
PYGM-201ENST00000164139 PLEKHH2Q8IVE3 1493 aa16.71■□□□□ 0.27
PYGM-201ENST00000164139 INSRP06213 1382 aa16.7■□□□□ 0.26
PYGM-201ENST00000164139 VSIG10Q8N0Z9 540 aa16.7■□□□□ 0.26
PYGM-201ENST00000164139 RGS3P49796 1198 aa16.7■□□□□ 0.26
PYGM-201ENST00000164139 ZMYM4Q5VZL5 1548 aa16.7■□□□□ 0.26
PYGM-201ENST00000164139 ARHGAP5Q13017 1502 aa16.69■□□□□ 0.26
PYGM-201ENST00000164139 PPP2R1AP30153 589 aa16.69■□□□□ 0.26
PYGM-201ENST00000164139 PLEKHH1Q9ULM0 1364 aa16.67■□□□□ 0.26
PYGM-201ENST00000164139 DUSP27Q5VZP5 1158 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms