RNA–Protein interactions for RNA: ENSMUST00000192221.5

Pcdh9-202, Transcript of Protocadherin 9, mousemouse

TSL 1 (best) BASIC

Gene Pcdh9, Length 5,161 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9-202ENSMUST00000192221 Tiam1Q60610 1591 aa7.2□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Grwd1Q810D6 446 aaKnown RBP7.19□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 OvosQ3UU35 1456 aa7.19□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Noc3lQ8VI84 807 aaKnown RBP7.19□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Eif4g2Q62448 906 aaKnown RBP7.19□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Nup160Q9Z0W3 1402 aaKnown RBP7.18□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Eif4g3Q80XI3 1579 aaKnown RBP7.18□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Kiaa0754Q69ZZ9 979 aa7.18□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Mug1P28665 1476 aa7.18□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Mapk8ip3Q9ESN9 1337 aa7.18□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 NudcO35685 332 aaKnown RBP7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Rab11fip3Q8CHD8 1047 aa7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Wdr7Q920I9 1489 aa7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 R3hcc1Q8BSI6 488 aa7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Gapvd1Q6PAR5 1458 aa7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Fgd1P52734 960 aa7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Fbxo2Q80UW2 297 aa7.17□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Ifit1bl1D3Z6F0 470 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Hmgb2P30681 210 aaKnown RBP7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Ccdc34Q3UI66 367 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Wwc2Q6NXJ0 1187 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Tmf1B9EKI3 1091 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Pdcl3Q8BVF2 240 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Atp10dQ8K2X1 1416 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Chaf1aQ9QWF0 911 aa7.16□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Csrnp3P59055 597 aa7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Prdm10Q3UTQ7 1184 aa7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Prm3Q62100 101 aa7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 GphnQ8BUV3 769 aaKnown RBP7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Ap3b2Q9JME5 1082 aa7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Cald1E9QA15 768 aaKnown RBP7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Erich6bQ9D4S6 220 aa7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Abcc1O35379 1528 aa7.15□□□□□ -1.26
Pcdh9-202ENSMUST00000192221 Cfap74Q3UY96 1578 aa7.15□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Dnttip2Q8R2M2 758 aaKnown RBP7.15□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Rfx7F8VPJ6 1459 aa7.15□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Trim30dE9PWL0 497 aa7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 BbxQ8VBW5 907 aa7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Mapk8ip2Q9ERE9 830 aa7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Ythdc2B2RR83 1445 aaKnown RBP7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Rrbp1Q99PL5 1605 aaKnown RBP7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Samd9lQ69Z37 1561 aa7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 VgfQ0VGU4 617 aa7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Pde4cQ3UEI1 686 aa7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Cwc15Q9JHS9 229 aaKnown RBP7.14□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 DroshaQ5HZJ0 1373 aaKnown RBP7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Tpm3-rs7D3Z2H9 248 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Dctn1O08788 1281 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Tpm3P21107 285 aaKnown RBP7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Mex3cQ05A36 652 aaKnown RBP7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Srcin1Q9QWI6 1250 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Arap1Q4LDD4 1452 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Pla2r1Q62028 1487 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Lrriq1Q0P5X1 1673 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Rundc1Q0VDN7 615 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Ggt6Q6PDE7 497 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Znf526Q8BI66 675 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Gm156Q58A37 223 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Taok2Q6ZQ29 1240 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Trim30aP15533 496 aa7.13□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Rapgef6Q5NCJ1 1609 aa7.12□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Pcf11G3X9Z4 1553 aa7.12□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Cspp1B2RX88 1205 aa7.12□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 NexmifQ5DTT1 1515 aa7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Utp14aQ640M1 767 aaKnown RBP7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Ppargc1bQ8VHJ7 1014 aa7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Znf771Q8BJ90 317 aa7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 NgefQ8CHT1 710 aa7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 FanciQ8K368 1330 aa7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Cd109Q8R422 1442 aa7.11□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Gps2Q921N8 327 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Ncapd3Q6ZQK0 1506 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Ankrd26Q811D2 1581 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Mrs2Q5NCE8 434 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Shroom2A2ALU4 1481 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 WizO88286 1684 aaKnown RBP7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Map7O88735 730 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Gpatch8A2A6A1 1505 aa7.1□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Adgrl3Q80TS3 1537 aa7.09□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Usp47Q8BY87 1376 aa7.09□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 Stk26Q99JT2 416 aa7.09□□□□□ -1.27
Pcdh9-202ENSMUST00000192221 AI481877A2ALV5 1481 aa7.09□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Shq1Q7TMX5 569 aa7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Hspa5P20029 655 aaKnown RBP7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Atf3Q60765 181 aa7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Slc52a2Q9D8F3 450 aa7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Hap1O35668 628 aa7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Dnai2A2AC93 623 aa7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Rtf1A2AQ19 715 aaKnown RBP7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Sept11Q8C1B7 431 aaKnown RBP7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Mrvi1Q9WUX5 899 aaKnown RBP7.08□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Kif3cO35066 796 aa7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Arglu1Q3UL36 271 aaKnown RBP7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Ush1cQ9ES64 910 aa7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Peg3Q3URU2 1571 aa7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Spata24Q6P926 205 aa7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Map3k5O35099 1380 aa7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Arhgef12Q8R4H2 1543 aaKnown RBP7.07□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Cyb5rlB1AS42 316 aa7.06□□□□□ -1.28
Pcdh9-202ENSMUST00000192221 Magi3Q9EQJ9 1476 aa7.06□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 69.4 ms