RNA–Protein interactions for RNA: ENSMUST00000190949.1

Gm28979-201, mousemouse

TSL 1 (best) BASIC

Gene Gm28979, Length 1,540 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28979-201ENSMUST00000190949 Pde8bE9Q4S1 865 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Rnf166Q3U9F6 237 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Cc2d2bA0A286YDU8 1405 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Rad54l2Q99NG0 1466 aa14.15□□□□□ -0.14
Gm28979-201ENSMUST00000190949 Mllt6B1AR10 1109 aa14.14□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Pbrm1Q8BSQ9 1634 aaKnown RBP14.14□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Arhgef5E9Q7D5 1581 aa14.13□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Cep170Q6A065 1588 aa14.12□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Cnksr2Q80YA9 1032 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Ric3Q8BPM6 367 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 PtprkP35822 1457 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Magi3Q9EQJ9 1476 aa14.11□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Plekhg3Q4VAC9 1341 aa14.1□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Grin2aP35436 1464 aa14.09□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Gapvd1Q6PAR5 1458 aa14.09□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Gabbr2Q80T41 940 aa14.09□□□□□ -0.15
Gm28979-201ENSMUST00000190949 Gm156Q58A37 223 aa14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Ttbk1Q6PCN3 1308 aa14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Efcab5A0JP43 1406 aa14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 AqrQ8CFQ3 1481 aaKnown RBP14.08□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Fgd6Q69ZL1 1399 aa14.07□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Rem2Q8VEL9 341 aa14.07□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Erbb3Q61526 1339 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Prdm16A2A935 1275 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Slc7a3P70423 618 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Emid1Q91VF5 444 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 PtprtQ99M80 1454 aa14.06□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Tmc3Q7TQ69 1130 aa14.05□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Dnajc5gQ8C632 165 aa14.04□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Unc5aQ8K1S4 898 aa14.04□□□□□ -0.16
Gm28979-201ENSMUST00000190949 Farp1F8VPU2 1048 aa14.01□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Ms4a4cQ9D3F6 226 aa14.01□□□□□ -0.17
Gm28979-201ENSMUST00000190949 AknaQ80VW7 1404 aa14.01□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Abcc1O35379 1528 aa13.99□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Pla2r1Q62028 1487 aa13.99□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Pprc1Q6NZN1 1644 aa13.99□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Ccdc88bQ4QRL3 1481 aa13.98□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Nudt12Q9DCN1 462 aa13.98□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Gm11563B1AQ90 168 aa13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Myt1Q8CFC2 1127 aa13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Krtap4-7Q9D732 168 aa13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Ythdc2B2RR83 1445 aaKnown RBP13.96□□□□□ -0.17
Gm28979-201ENSMUST00000190949 Slain2Q8CI08 581 aa13.95□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Rapgef2Q8CHG7 1496 aa13.94□□□□□ -0.18
Gm28979-201ENSMUST00000190949 NrkQ9R0G8 1455 aa13.94□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Top2aQ01320 1528 aaKnown RBP13.93□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Chd1P40201 1711 aa13.93□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Gpatch8A2A6A1 1505 aa13.92□□□□□ -0.18
Gm28979-201ENSMUST00000190949 SynmQ70IV5 1561 aa13.92□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Prr7Q3V0I2 269 aa13.9□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Shroom4Q1W617 1475 aa13.9□□□□□ -0.18
Gm28979-201ENSMUST00000190949 Ciz1Q8VEH2 845 aa13.9□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Dnmt1P13864 1620 aaKnown RBP13.89□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Tpcn2Q8BWC0 731 aa13.89□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Bcl11bQ99PV8 884 aa13.89□□□□□ -0.19
Gm28979-201ENSMUST00000190949 CadpsQ80TJ1 1355 aa13.88□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Abcc2Q8VI47 1543 aa13.88□□□□□ -0.19
Gm28979-201ENSMUST00000190949 BC005561E9Q5E2 1589 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Psen1P49769 467 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Foxd4Q60688 444 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Ano8Q6PB70 1060 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Ints3Q7TPD0 1041 aaKnown RBP13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Neo1P97798 1493 aa13.87□□□□□ -0.19
Gm28979-201ENSMUST00000190949 LtbrP50284 415 aa13.86□□□□□ -0.19
Gm28979-201ENSMUST00000190949 XpcP51612 930 aa13.86□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Abca16E9PWJ7 1678 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Setbp1Q9Z180 1582 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Soga1E1U8D0 1418 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 GnpatP98192 678 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 PxdnQ3UQ28 1475 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 E2f4Q8R0K9 410 aa13.85□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Kctd12Q6WVG3 327 aa13.84□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Slc24a3Q99PD7 645 aa13.84□□□□□ -0.19
Gm28979-201ENSMUST00000190949 Arhgap27A2AB59 869 aa13.83□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Scaf8Q6DID3 1268 aa13.82□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Irx6Q9ER75 438 aa13.82□□□□□ -0.2
Gm28979-201ENSMUST00000190949 WizO88286 1684 aaKnown RBP13.82□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Map3k4O08648 1597 aa13.81□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Gm11555B1AQ89 175 aa13.81□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Tsr1Q5SWD9 803 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 MetrnQ8C1Q4 291 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Ttll13A4Q9F6 804 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Spryd3E9Q9B3 442 aa13.8□□□□□ -0.2
Gm28979-201ENSMUST00000190949 TchhA0A0B4J1F9 1599 aa13.79□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Gm14025A2AP89 1413 aa13.79□□□□□ -0.2
Gm28979-201ENSMUST00000190949 A930017K11RikE0CXQ2 571 aa13.79□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Nfxl1E9Q8I7 918 aaKnown RBP13.78□□□□□ -0.2
Gm28979-201ENSMUST00000190949 Ppp1r18Q8BQ30 594 aa13.78□□□□□ -0.2
Gm28979-201ENSMUST00000190949 VaspP70460 375 aaKnown RBP13.77□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Ak9G3UYQ4 1894 aa13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Eif4g1Q6NZJ6 1600 aaKnown RBP13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Fbxo31Q3TQF0 507 aa13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Adamts12Q811B3 1600 aa13.76□□□□□ -0.21
Gm28979-201ENSMUST00000190949 AI481877A2ALV5 1481 aa13.75□□□□□ -0.21
Gm28979-201ENSMUST00000190949 EprsQ8CGC7 1512 aaKnown RBP13.75□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Mre11Q61216 706 aa13.74□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Slx4Q6P1D7 1565 aa13.73□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Arhgef12Q8R4H2 1543 aaKnown RBP13.72□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Taok2Q6ZQ29 1240 aa13.72□□□□□ -0.21
Gm28979-201ENSMUST00000190949 Irf6P97431 467 aa13.71□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 35 ms