RNA–Protein interactions for RNA: ENSMUST00000176216.8

Cux1-207, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-207ENSMUST00000176216 Dot1lQ6XZL8 1540 aa13.89□□□□□ -0.19
Cux1-207ENSMUST00000176216 Ttbk1Q6PCN3 1308 aa13.88□□□□□ -0.19
Cux1-207ENSMUST00000176216 Rrp7aQ9D1C9 280 aaKnown RBP13.88□□□□□ -0.19
Cux1-207ENSMUST00000176216 Cpsf1Q9EPU4 1441 aaKnown RBP13.88□□□□□ -0.19
Cux1-207ENSMUST00000176216 Mlh3A0A1Y7VMP7 1443 aa13.88□□□□□ -0.19
Cux1-207ENSMUST00000176216 Polr3aB2RXC6 1390 aa13.87□□□□□ -0.19
Cux1-207ENSMUST00000176216 Kank1E9Q238 1360 aa13.87□□□□□ -0.19
Cux1-207ENSMUST00000176216 Zcchc11B2RX14 1644 aaKnown RBP13.87□□□□□ -0.19
Cux1-207ENSMUST00000176216 Asxl1P59598 1514 aa13.86□□□□□ -0.19
Cux1-207ENSMUST00000176216 Zscan21Q07231 555 aa13.86□□□□□ -0.19
Cux1-207ENSMUST00000176216 Ssh2Q5SW75 1423 aa13.85□□□□□ -0.19
Cux1-207ENSMUST00000176216 Rock2P70336 1388 aa13.85□□□□□ -0.19
Cux1-207ENSMUST00000176216 Pbrm1Q8BSQ9 1634 aaKnown RBP13.84□□□□□ -0.19
Cux1-207ENSMUST00000176216 DroshaQ5HZJ0 1373 aaKnown RBP13.84□□□□□ -0.19
Cux1-207ENSMUST00000176216 Mak16Q8BGS0 296 aaKnown RBP13.84□□□□□ -0.19
Cux1-207ENSMUST00000176216 Ipo9Q91YE6 1041 aa13.84□□□□□ -0.19
Cux1-207ENSMUST00000176216 Pank3Q8R2W9 370 aa13.83□□□□□ -0.19
Cux1-207ENSMUST00000176216 Inpp5dQ9ES52 1191 aa13.83□□□□□ -0.2
Cux1-207ENSMUST00000176216 PtprgQ05909 1442 aa13.83□□□□□ -0.2
Cux1-207ENSMUST00000176216 Iqgap1Q9JKF1 1657 aaKnown RBP13.82□□□□□ -0.2
Cux1-207ENSMUST00000176216 Ifit1bl1D3Z6F0 470 aa13.82□□□□□ -0.2
Cux1-207ENSMUST00000176216 Jph4Q80WT0 628 aa13.82□□□□□ -0.2
Cux1-207ENSMUST00000176216 Caskin1Q6P9K8 1431 aa13.82□□□□□ -0.2
Cux1-207ENSMUST00000176216 PrkcshO08795 521 aa13.82□□□□□ -0.2
Cux1-207ENSMUST00000176216 Neo1P97798 1493 aa13.81□□□□□ -0.2
Cux1-207ENSMUST00000176216 Atp7aQ64430 1491 aa13.81□□□□□ -0.2
Cux1-207ENSMUST00000176216 Trappc8E9PWG2 1437 aa13.81□□□□□ -0.2
Cux1-207ENSMUST00000176216 Lrrc9Q8CDN9 1456 aa13.8□□□□□ -0.2
Cux1-207ENSMUST00000176216 Cd109Q8R422 1442 aa13.8□□□□□ -0.2
Cux1-207ENSMUST00000176216 PrxO55103 1391 aa13.8□□□□□ -0.2
Cux1-207ENSMUST00000176216 Fmn2Q9JL04 1578 aa13.8□□□□□ -0.2
Cux1-207ENSMUST00000176216 Rock1P70335 1354 aa13.79□□□□□ -0.2
Cux1-207ENSMUST00000176216 Sart1Q9Z315 806 aaKnown RBP13.79□□□□□ -0.2
Cux1-207ENSMUST00000176216 Tarbp1E9Q368 1579 aa13.79□□□□□ -0.2
Cux1-207ENSMUST00000176216 Kdm5cP41230 1554 aa13.79□□□□□ -0.2
Cux1-207ENSMUST00000176216 Esx1O88933 382 aa13.78□□□□□ -0.2
Cux1-207ENSMUST00000176216 ChgaP26339 463 aaKnown RBP13.78□□□□□ -0.2
Cux1-207ENSMUST00000176216 Ccdc27Q3V036 639 aa13.78□□□□□ -0.2
Cux1-207ENSMUST00000176216 Anp32bQ9EST5 272 aaKnown RBP13.78□□□□□ -0.2
Cux1-207ENSMUST00000176216 Tubgcp6G5E8P0 1769 aa13.77□□□□□ -0.21
Cux1-207ENSMUST00000176216 NeflP08551 543 aa13.76□□□□□ -0.21
Cux1-207ENSMUST00000176216 Gapvd1Q6PAR5 1458 aa13.76□□□□□ -0.21
Cux1-207ENSMUST00000176216 Lrriq1Q0P5X1 1673 aa13.75□□□□□ -0.21
Cux1-207ENSMUST00000176216 CrbnQ8C7D2 445 aa13.75□□□□□ -0.21
Cux1-207ENSMUST00000176216 Prkrip1Q9CWV6 186 aaKnown RBP13.75□□□□□ -0.21
Cux1-207ENSMUST00000176216 Fancd2Q80V62 1450 aa13.75□□□□□ -0.21
Cux1-207ENSMUST00000176216 AknaQ80VW7 1404 aa13.75□□□□□ -0.21
Cux1-207ENSMUST00000176216 Adgrl2Q8JZZ7 1487 aa13.74□□□□□ -0.21
Cux1-207ENSMUST00000176216 Zscan10Q3URR7 782 aa13.74□□□□□ -0.21
Cux1-207ENSMUST00000176216 Clstn2Q9ER65 966 aa13.74□□□□□ -0.21
Cux1-207ENSMUST00000176216 Dnmt1P13864 1620 aaKnown RBP13.74□□□□□ -0.21
Cux1-207ENSMUST00000176216 Arhgap5P97393 1501 aa13.74□□□□□ -0.21
Cux1-207ENSMUST00000176216 B4galnt3Q6L8S8 986 aa13.73□□□□□ -0.21
Cux1-207ENSMUST00000176216 Mink1Q9JM52 1308 aa13.73□□□□□ -0.21
Cux1-207ENSMUST00000176216 Fam208aQ69ZR9 1610 aaKnown RBP13.73□□□□□ -0.21
Cux1-207ENSMUST00000176216 Ak9G3UYQ4 1894 aa13.73□□□□□ -0.21
Cux1-207ENSMUST00000176216 Zmym4A2A791 1549 aaKnown RBP13.73□□□□□ -0.21
Cux1-207ENSMUST00000176216 Upf2A2AT37 1269 aaKnown RBP13.72□□□□□ -0.21
Cux1-207ENSMUST00000176216 Eif4g3Q80XI3 1579 aaKnown RBP13.72□□□□□ -0.21
Cux1-207ENSMUST00000176216 Adamts13Q769J6 1426 aa13.72□□□□□ -0.21
Cux1-207ENSMUST00000176216 Ttll13A4Q9F6 804 aa13.72□□□□□ -0.21
Cux1-207ENSMUST00000176216 Mroh3A0A1D5RM54 893 aa13.71□□□□□ -0.21
Cux1-207ENSMUST00000176216 Slc4a1apE9PX68 744 aa13.71□□□□□ -0.21
Cux1-207ENSMUST00000176216 Erich6D3Z6S9 713 aa13.71□□□□□ -0.22
Cux1-207ENSMUST00000176216 Kdm2aP59997 1161 aa13.71□□□□□ -0.22
Cux1-207ENSMUST00000176216 Kif16bB1AVY7 1312 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Dbr1Q923B1 550 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Apbb1Q9QXJ1 710 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Pde4cQ3UEI1 686 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Iqcf3Q9D498 203 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Gm32742A0A1B0GT42 1604 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Plch2A2AP18 1501 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Map3k5O35099 1380 aa13.69□□□□□ -0.22
Cux1-207ENSMUST00000176216 Sall3Q62255 1320 aa13.68□□□□□ -0.22
Cux1-207ENSMUST00000176216 Tmf1B9EKI3 1091 aa13.68□□□□□ -0.22
Cux1-207ENSMUST00000176216 Setd1aE9PYH6 1716 aa13.68□□□□□ -0.22
Cux1-207ENSMUST00000176216 Spag9Q58A65 1321 aaKnown RBP13.68□□□□□ -0.22
Cux1-207ENSMUST00000176216 Ppp2r1aQ76MZ3 589 aa13.68□□□□□ -0.22
Cux1-207ENSMUST00000176216 Tex14Q7M6U3 1450 aa13.67□□□□□ -0.22
Cux1-207ENSMUST00000176216 TnikP83510 1323 aa13.66□□□□□ -0.22
Cux1-207ENSMUST00000176216 Edc4Q3UJB9 1406 aaKnown RBP13.66□□□□□ -0.22
Cux1-207ENSMUST00000176216 Rusc2Q80U22 1514 aa13.65□□□□□ -0.22
Cux1-207ENSMUST00000176216 Srcin1Q9QWI6 1250 aa13.65□□□□□ -0.22
Cux1-207ENSMUST00000176216 Prdm10Q3UTQ7 1184 aa13.63□□□□□ -0.23
Cux1-207ENSMUST00000176216 Rrbp1Q99PL5 1605 aaKnown RBP13.63□□□□□ -0.23
Cux1-207ENSMUST00000176216 Neurod2Q62414 383 aa13.63□□□□□ -0.23
Cux1-207ENSMUST00000176216 Tulp4Q9JIL5 1547 aa13.62□□□□□ -0.23
Cux1-207ENSMUST00000176216 Fam184bQ0KK56 942 aa13.62□□□□□ -0.23
Cux1-207ENSMUST00000176216 Ppip5k1A2ARP1 1436 aa13.62□□□□□ -0.23
Cux1-207ENSMUST00000176216 Hdac5Q9Z2V6 1113 aa13.62□□□□□ -0.23
Cux1-207ENSMUST00000176216 Kdm2bQ6P1G2 1309 aa13.62□□□□□ -0.23
Cux1-207ENSMUST00000176216 Mast1Q9R1L5 1570 aa13.61□□□□□ -0.23
Cux1-207ENSMUST00000176216 Gm16486A0A1D5RMD1 1434 aa13.61□□□□□ -0.23
Cux1-207ENSMUST00000176216 Cdc42bpbQ7TT50 1713 aa13.6□□□□□ -0.23
Cux1-207ENSMUST00000176216 Nkx1-2P42580 305 aa13.6□□□□□ -0.23
Cux1-207ENSMUST00000176216 Hsp90aa1P07901 733 aaKnown RBP13.6□□□□□ -0.23
Cux1-207ENSMUST00000176216 Rwdd1Q9CQK7 243 aa13.6□□□□□ -0.23
Cux1-207ENSMUST00000176216 Speer4f1Q9D5Q6 258 aa13.6□□□□□ -0.23
Cux1-207ENSMUST00000176216 AI481877A2ALV5 1481 aa13.6□□□□□ -0.23
Cux1-207ENSMUST00000176216 Os9Q8K2C7 672 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms