RNA–Protein interactions for RNA: ENSMUST00000171416.1

R3hdm4-202, Transcript of R3H domain-containing protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene R3hdm4, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4-202ENSMUST00000171416 Trpm2Q91YD4 1506 aa23■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Kif1bQ60575 1816 aaKnown RBP23■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Myo5cE9Q1F5 1742 aa22.99■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 MlecQ6ZQI3 291 aaKnown RBP22.98■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Clstn2Q9ER65 966 aa22.98■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Talpid3E9PV87 1520 aa22.97■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Rsph4aQ8BYM7 716 aa22.97■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Nup155Q99P88 1391 aaKnown RBP22.96■■□□□ 1.27
R3hdm4-202ENSMUST00000171416 Afap1Q80YS6 731 aa22.94■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Zfp644E9QA22 1323 aa22.94■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Naip5Q9R016 1403 aa22.94■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Pde4cQ3UEI1 686 aa22.93■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Safb2Q80YR5 991 aaKnown RBP22.93■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Mier1Q5UAK0 511 aa22.92■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Zbtb7cQ8VCZ7 619 aa22.92■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Ube2uB1AUC4 352 aa22.92■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Map4P27546 1125 aaKnown RBP22.92■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Myom2Q14BI5 1463 aa22.9■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Supt6hQ62383 1726 aaKnown RBP22.9■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 Abca6Q8K441 1624 aa22.9■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 CltcQ68FD5 1675 aaKnown RBP22.89■■□□□ 1.26
R3hdm4-202ENSMUST00000171416 RictorQ6QI06 1708 aa22.88■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Robo2Q7TPD3 1470 aa22.88■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Prex1Q69ZK0 1650 aa22.88■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Ccer2J3QPU5 274 aa22.87■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Hnrnpul2Q00PI9 745 aaKnown RBP22.86■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Asxl1P59598 1514 aa22.86■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Lamc1P02468 1607 aaKnown RBP22.84■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Adamts7Q68SA9 1657 aa22.84■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Ttll5Q8CHB8 1328 aa22.83■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Knl1Q66JQ7 1612 aa22.83■■□□□ 1.25
R3hdm4-202ENSMUST00000171416 Tmem131lQ3U3D7 1597 aa22.81■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Arhgap23Q69ZH9 1483 aa22.81■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 PtprgQ05909 1442 aa22.81■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Ylpm1Q9R0I7 1386 aaKnown RBP22.8■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Nsd2Q8BVE8 1365 aa22.79■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Brwd3A2AHJ4 1799 aa22.79■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Kif21bQ9QXL1 1668 aa22.78■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Myom3A2ABU4 1439 aa22.78■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Mphosph9A6H5Y1 991 aa22.77■■□□□ 1.24
R3hdm4-202ENSMUST00000171416 Cd109Q8R422 1442 aa22.76■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 Dip2bQ3UH60 1574 aa22.76■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 AnkarA2RT91 1465 aa22.76■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 PtprmP28828 1452 aa22.76■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 Med14A2ABV5 1459 aaKnown RBP22.74■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 Hfm1D3Z4R1 1434 aa22.74■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 MyclP10166 368 aa22.74■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 Ttc21bQ0HA38 1315 aa22.74■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 Trak1Q6PD31 939 aa22.72■■□□□ 1.23
R3hdm4-202ENSMUST00000171416 Akap12Q9WTQ5 1684 aa22.7■■□□□ 1.22
R3hdm4-202ENSMUST00000171416 4930407I10RikD3Z5T8 1512 aa22.68■■□□□ 1.22
R3hdm4-202ENSMUST00000171416 Bcl9Q9D219 1425 aa22.67■■□□□ 1.22
R3hdm4-202ENSMUST00000171416 Abcc6Q9R1S7 1498 aa22.66■■□□□ 1.22
R3hdm4-202ENSMUST00000171416 Atp7aQ64430 1491 aa22.64■■□□□ 1.22
R3hdm4-202ENSMUST00000171416 Tarbp1E9Q368 1579 aa22.64■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Ankrd36D3Z4K0 1415 aa22.64■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Ahdc1Q6PAL7 1594 aaKnown RBP22.63■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Ino80Q6ZPV2 1559 aa22.63■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Gm13697A2AK42 830 aa22.62■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Iqgap3F8VQ29 1632 aa22.62■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Tecpr2Q3UH45 1423 aa22.61■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Adgrb3Q80ZF8 1522 aa22.6■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Pkd2O35245 966 aa22.59■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Prdm2A2A7B5 1709 aaKnown RBP22.59■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Topaz1E5FYH1 1653 aa22.59■■□□□ 1.21
R3hdm4-202ENSMUST00000171416 Dhx9O70133 1380 aaKnown RBP22.56■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Hdac5Q9Z2V6 1113 aa22.56■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Kdm5aQ3UXZ9 1690 aa22.55■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Edc4Q3UJB9 1406 aaKnown RBP22.55■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Ercc6l2Q9JIM3 1537 aa22.55■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Skint5A7XUY5 1461 aa22.55■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Uggt1Q6P5E4 1551 aa22.54■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Efcab6Q6P1E8 1516 aa22.52■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Chd2E9PZM4 1827 aaKnown RBP22.52■■□□□ 1.2
R3hdm4-202ENSMUST00000171416 Erich6D3Z6S9 713 aa22.51■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 DroshaQ5HZJ0 1373 aaKnown RBP22.5■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Abca8aQ8K442 1620 aa22.49■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Cyb5rlB1AS42 316 aa22.49■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Dot1lQ6XZL8 1540 aa22.49■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Ppip5k1A2ARP1 1436 aa22.49■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Pik3c2gO70167 1506 aa22.48■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 ErbinQ80TH2 1402 aa22.48■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Kif13aQ9EQW7 1749 aa22.48■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Itsn1Q9Z0R4 1714 aa22.48■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Eid3Q3V124 375 aa22.47■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 Ehbp1l1Q99MS7 1716 aa22.46■■□□□ 1.19
R3hdm4-202ENSMUST00000171416 GphnQ8BUV3 769 aaKnown RBP22.45■■□□□ 1.18
R3hdm4-202ENSMUST00000171416 Rprd2Q6NXI6 1469 aaKnown RBP22.43■■□□□ 1.18
R3hdm4-202ENSMUST00000171416 Stk24Q99KH8 431 aa22.42■■□□□ 1.18
R3hdm4-202ENSMUST00000171416 Rock1P70335 1354 aa22.41■■□□□ 1.18
R3hdm4-202ENSMUST00000171416 Mroh1E0CZ22 1640 aa22.41■■□□□ 1.18
R3hdm4-202ENSMUST00000171416 Naip7Q9JIB3 1402 aa22.4■■□□□ 1.18
R3hdm4-202ENSMUST00000171416 Dip2aQ8BWT5 1523 aa22.38■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Usp47Q8BY87 1376 aa22.38■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 AatkQ80YE4 1365 aa22.37■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Sall3Q62255 1320 aa22.37■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Rimbp3Q3V0F0 1606 aa22.37■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Acin1Q9JIX8 1338 aaKnown RBP22.37■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Gemin5Q8BX17 1502 aaKnown RBP22.35■■□□□ 1.17
R3hdm4-202ENSMUST00000171416 Scn4aQ9ER60 1841 aa22.34■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 8.9 ms