RNA–Protein interactions for RNA: ENSMUST00000171342.2

Rnf41-202, Transcript of E3 ubiquitin-protein ligase NRDP1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf41, Length 3,283 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf41-202ENSMUST00000171342 Smg6P61406 1418 aaKnown RBP13.51□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Washc2Q6PGL7 1334 aa13.51□□□□□ -0.25
Rnf41-202ENSMUST00000171342 AI481877A2ALV5 1481 aa13.5□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Cfap74Q3UY96 1578 aa13.5□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Atp7aQ64430 1491 aa13.49□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Myom3A2ABU4 1439 aa13.49□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Ppp1r18Q8BQ30 594 aa13.49□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Gm32742A0A1B0GT42 1604 aa13.48□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Rnf17Q99MV7 1640 aa13.48□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Lamc1P02468 1607 aaKnown RBP13.48□□□□□ -0.25
Rnf41-202ENSMUST00000171342 PtprgQ05909 1442 aa13.47□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Hdac5Q9Z2V6 1113 aa13.47□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Ncoa1P70365 1447 aa13.46□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Eif5bQ05D44 1216 aaKnown RBP13.46□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Exoc6Q8R313 802 aa13.46□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Trpm2Q91YD4 1506 aa13.46□□□□□ -0.25
Rnf41-202ENSMUST00000171342 Sall3Q62255 1320 aa13.46□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Kif14L0N7N1 1674 aaKnown RBP13.45□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Abca8bQ8K440 1620 aa13.45□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Mug2P28666 1451 aa13.44□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Gm38655A0A286YDK6 273 aa13.44□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Abcc3B2RX12 1523 aa13.43□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Nsd2Q8BVE8 1365 aa13.43□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Tnnt3Q9QZ47 272 aa13.43□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Asxl1P59598 1514 aa13.42□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Cdk13Q69ZA1 1511 aaKnown RBP13.42□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Gm20521D3Z5F7 333 aa13.42□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Gm13695A2AK44 830 aa13.41□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Plppr3Q7TPB0 716 aa13.41□□□□□ -0.26
Rnf41-202ENSMUST00000171342 DroshaQ5HZJ0 1373 aaKnown RBP13.41□□□□□ -0.26
Rnf41-202ENSMUST00000171342 Kiaa1210E9Q0C6 1637 aa13.39□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Cep170Q6A065 1588 aa13.39□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Polr3aB2RXC6 1390 aa13.39□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Rock1P70335 1354 aa13.39□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Prdm10Q3UTQ7 1184 aa13.39□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Cdc42bpbQ7TT50 1713 aa13.38□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Ttc21bQ0HA38 1315 aa13.38□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Zfyve16Q80U44 1528 aa13.38□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Srpk2O54781 681 aaKnown RBP13.38□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Mast1Q9R1L5 1570 aa13.38□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Rock2P70336 1388 aa13.38□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Znf710Q3U288 666 aa13.37□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Dot1lQ6XZL8 1540 aa13.37□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Plekhg5Q66T02 1073 aa13.37□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Atp1b4Q99ME6 356 aa13.37□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Anp32bQ9EST5 272 aaKnown RBP13.37□□□□□ -0.27
Rnf41-202ENSMUST00000171342 OvosQ3UU35 1456 aa13.36□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Fan1Q69ZT1 1020 aa13.36□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Pprc1Q6NZN1 1644 aa13.36□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Srcin1Q9QWI6 1250 aa13.36□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Tarbp1E9Q368 1579 aa13.36□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Slc4a2P13808 1237 aaKnown RBP13.35□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Kif21bQ9QXL1 1668 aa13.35□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Usp54Q8BL06 1588 aaKnown RBP13.35□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Kidins220E9Q9B7 1793 aa13.34□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Edc4Q3UJB9 1406 aaKnown RBP13.34□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Ptch1Q61115 1434 aa13.34□□□□□ -0.27
Rnf41-202ENSMUST00000171342 ErbinQ80TH2 1402 aa13.34□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Mbd5B1AYB6 1498 aa13.34□□□□□ -0.27
Rnf41-202ENSMUST00000171342 Ylpm1Q9R0I7 1386 aaKnown RBP13.33□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Cpsf1Q9EPU4 1441 aaKnown RBP13.33□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Naip6Q9JIB6 1403 aa13.33□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Pdcd11Q6NS46 1862 aaKnown RBP13.33□□□□□ -0.28
Rnf41-202ENSMUST00000171342 RalgapbQ8BQZ4 1484 aa13.33□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Pank3Q8R2W9 370 aa13.32□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Neurl4Q5NCX5 1563 aa13.32□□□□□ -0.28
Rnf41-202ENSMUST00000171342 P3h3Q8CG70 732 aa13.31□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Hecw1Q8K4P8 1604 aa13.31□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Inpp5dQ9ES52 1191 aa13.31□□□□□ -0.28
Rnf41-202ENSMUST00000171342 SafbD3YXK2 937 aaKnown RBP13.3□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Nos1Q9Z0J4 1429 aa13.3□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Slc4a1apE9PX68 744 aa13.29□□□□□ -0.28
Rnf41-202ENSMUST00000171342 1700123L14RikQ3V2K7 440 aa13.29□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Gtf2e1Q9D0D5 440 aa13.29□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Abca9Q8K449 1623 aa13.28□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Usp40Q8BWR4 1235 aa13.28□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Kif1bQ60575 1816 aaKnown RBP13.28□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Adgrl3Q80TS3 1537 aa13.28□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Myt1Q8CFC2 1127 aa13.28□□□□□ -0.28
Rnf41-202ENSMUST00000171342 PnisrA2AJT4 805 aaKnown RBP13.27□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Cnga1P29974 684 aa13.27□□□□□ -0.28
Rnf41-202ENSMUST00000171342 Znf518aB2RRF6 1478 aaKnown RBP13.27□□□□□ -0.29
Rnf41-202ENSMUST00000171342 ShprhQ7TPQ3 1674 aa13.25□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Tmf1B9EKI3 1091 aa13.25□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Ppip5k1A2ARP1 1436 aa13.25□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Depdc5P61460 1591 aa13.25□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Stag3O70576 1240 aa13.24□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Ofd1Q80Z25 1017 aa13.24□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Abcc6Q9R1S7 1498 aa13.24□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Afap1Q80YS6 731 aa13.24□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Rpgrip1lQ8CG73 1264 aa13.24□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Stk26Q99JT2 416 aa13.24□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Gli2Q0VGT2 1544 aa13.23□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Calr4Q3TQS0 420 aa13.23□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Robo2Q7TPD3 1470 aa13.23□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Puf60Q3UEB3 564 aaKnown RBP13.23□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Rad21Q61550 635 aaKnown RBP13.23□□□□□ -0.29
Rnf41-202ENSMUST00000171342 PrxO55103 1391 aa13.22□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Zscan10Q3URR7 782 aa13.22□□□□□ -0.29
Rnf41-202ENSMUST00000171342 Xrn1P97789 1719 aaKnown RBP13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms