RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 4930407I10RikD3Z5T8 1512 aa21.31■■□□□ 1
Ccdc171-204ENSMUST00000126429 Afap1Q80YS6 731 aa21.31■■□□□ 1
Ccdc171-204ENSMUST00000126429 Cfap65Q3V0B4 1847 aa21.31■■□□□ 1
Ccdc171-204ENSMUST00000126429 Gli2Q0VGT2 1544 aa21.3■■□□□ 1
Ccdc171-204ENSMUST00000126429 Spag9Q58A65 1321 aaKnown RBP21.3■■□□□ 1
Ccdc171-204ENSMUST00000126429 Xrn1P97789 1719 aaKnown RBP21.29■■□□□ 1
Ccdc171-204ENSMUST00000126429 Talpid3E9PV87 1520 aa21.29■■□□□ 1
Ccdc171-204ENSMUST00000126429 Ssh2Q5SW75 1423 aa21.28■■□□□ 1
Ccdc171-204ENSMUST00000126429 UacaQ8CGB3 1411 aa21.28■■□□□ 1
Ccdc171-204ENSMUST00000126429 Trpm1Q2TV84 1622 aa21.27■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Abca6Q8K441 1624 aa21.27■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Kcna4Q61423 654 aa21.25■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Myom2Q14BI5 1463 aa21.24■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 NclP09405 707 aaKnown RBP21.23■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Topaz1E5FYH1 1653 aa21.23■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Zbtb7cQ8VCZ7 619 aa21.23■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Rfx7F8VPJ6 1459 aa21.22■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Topbp1Q6ZQF0 1515 aa21.22■□□□□ 0.99
Ccdc171-204ENSMUST00000126429 Uggt2E9Q4X2 1504 aa21.2■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Vps8Q0P5W1 1427 aa21.19■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Plch2A2AP18 1501 aa21.18■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Abca17E9PX95 1733 aa21.18■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Usp54Q8BL06 1588 aaKnown RBP21.18■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Naip5Q9R016 1403 aa21.16■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Ltbp4Q8K4G1 1666 aa21.16■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Dip2bQ3UH60 1574 aa21.16■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Pde4cQ3UEI1 686 aa21.16■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Zfp644E9QA22 1323 aa21.16■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Mia2Q91ZV0 1396 aa21.14■□□□□ 0.98
Ccdc171-204ENSMUST00000126429 Trpm2Q91YD4 1506 aa21.13■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Rsph4aQ8BYM7 716 aa21.11■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 AlkP97793 1621 aa21.11■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 ShprhQ7TPQ3 1674 aa21.1■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Hnrnpul2Q00PI9 745 aaKnown RBP21.1■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Nup155Q99P88 1391 aaKnown RBP21.09■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Ncoa1P70365 1447 aa21.09■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Hspa1lP16627 641 aa21.09■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Fhad1A6PWD2 1420 aa21.08■□□□□ 0.97
Ccdc171-204ENSMUST00000126429 Map4P27546 1125 aaKnown RBP21.08■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 CltcQ68FD5 1675 aaKnown RBP21.06■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 Arhgap23Q69ZH9 1483 aa21.06■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 Knl1Q66JQ7 1612 aa21.04■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 Iqsec2Q5DU25 1478 aa21.04■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 Clstn2Q9ER65 966 aa21.03■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 Ttll5Q8CHB8 1328 aa21.02■□□□□ 0.96
Ccdc171-204ENSMUST00000126429 RictorQ6QI06 1708 aa21.01■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Ube2uB1AUC4 352 aa21.01■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Med14A2ABV5 1459 aaKnown RBP21■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Bcl9Q9D219 1425 aa20.99■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Asxl1P59598 1514 aa20.99■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Myo5cE9Q1F5 1742 aa20.99■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Robo2Q7TPD3 1470 aa20.98■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Ttc21bQ0HA38 1315 aa20.98■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Prex1Q69ZK0 1650 aa20.98■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Kif1bQ60575 1816 aaKnown RBP20.97■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Hfm1D3Z4R1 1434 aa20.97■□□□□ 0.95
Ccdc171-204ENSMUST00000126429 Gli3Q61602 1583 aa20.94■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Adamts7Q68SA9 1657 aa20.92■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Tmem131lQ3U3D7 1597 aa20.92■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Gm13697A2AK42 830 aa20.92■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Myom3A2ABU4 1439 aa20.92■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Kif7B7ZNG0 1348 aa20.92■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Ylpm1Q9R0I7 1386 aaKnown RBP20.91■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 AnkarA2RT91 1465 aa20.9■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Trak1Q6PD31 939 aa20.9■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 PtprgQ05909 1442 aa20.9■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Gemin5Q8BX17 1502 aaKnown RBP20.89■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Phlpp1Q8CHE4 1687 aa20.89■□□□□ 0.94
Ccdc171-204ENSMUST00000126429 Cd109Q8R422 1442 aa20.88■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Mphosph9A6H5Y1 991 aa20.88■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Mier1Q5UAK0 511 aa20.88■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 GphnQ8BUV3 769 aaKnown RBP20.88■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Rimbp3Q3V0F0 1606 aa20.87■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Bcl11bQ99PV8 884 aa20.87■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Nsd2Q8BVE8 1365 aa20.87■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Abcc6Q9R1S7 1498 aa20.86■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Rapgef3Q8VCC8 918 aa20.84■□□□□ 0.93
Ccdc171-204ENSMUST00000126429 Scaf11E9PZM7 1456 aaKnown RBP20.81■□□□□ 0.92
Ccdc171-204ENSMUST00000126429 Akap12Q9WTQ5 1684 aa20.79■□□□□ 0.92
Ccdc171-204ENSMUST00000126429 Atp7aQ64430 1491 aa20.79■□□□□ 0.92
Ccdc171-204ENSMUST00000126429 Ccer2J3QPU5 274 aa20.79■□□□□ 0.92
Ccdc171-204ENSMUST00000126429 Erich6D3Z6S9 713 aa20.76■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Adgrb3Q80ZF8 1522 aa20.76■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Rims2Q9EQZ7 1530 aa20.76■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Skint5A7XUY5 1461 aa20.75■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Tecpr2Q3UH45 1423 aa20.75■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Dhx9O70133 1380 aaKnown RBP20.75■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Lamc1P02468 1607 aaKnown RBP20.74■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Tarbp1E9Q368 1579 aa20.73■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Ino80Q6ZPV2 1559 aa20.73■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Edc4Q3UJB9 1406 aaKnown RBP20.73■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Pkd2O35245 966 aa20.72■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 Stk24Q99KH8 431 aa20.72■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 PzpQ61838 1495 aa20.71■□□□□ 0.91
Ccdc171-204ENSMUST00000126429 DroshaQ5HZJ0 1373 aaKnown RBP20.7■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Iqgap3F8VQ29 1632 aa20.69■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Chd2E9PZM4 1827 aaKnown RBP20.69■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Efcab6Q6P1E8 1516 aa20.68■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Sall3Q62255 1320 aa20.68■□□□□ 0.9
Ccdc171-204ENSMUST00000126429 Fbln2P37889 1221 aa20.68■□□□□ 0.9
Retrieved 100 of 22,080 RNA–protein pairs in 14.8 ms