RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Abcc1O35379 1528 aa13.18□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Il4rP16382 810 aa13.18□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Rad21Q61550 635 aaKnown RBP13.17□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Jph4Q80WT0 628 aa13.17□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Shroom4Q1W617 1475 aa13.17□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Cul7Q8VE73 1689 aa13.17□□□□□ -0.3
Ctc1-202ENSMUST00000116359 NrkQ9R0G8 1455 aa13.17□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Trim30dE9PWL0 497 aa13.17□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Cep170Q6A065 1588 aa13.16□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Ppp1r9bQ6R891 817 aaKnown RBP13.16□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Ak7Q9D2H2 614 aa13.16□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Naip2Q9QUK4 1447 aa13.16□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Kdm2bQ6P1G2 1309 aa13.16□□□□□ -0.3
Ctc1-202ENSMUST00000116359 Magi3Q9EQJ9 1476 aa13.15□□□□□ -0.3
Ctc1-202ENSMUST00000116359 PtprtQ99M80 1454 aa13.15□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Ipo8Q7TMY7 1010 aa13.14□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Fam43aQ8BUP8 424 aa13.14□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Tpm2P58774 284 aa13.14□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Zcchc11B2RX14 1644 aaKnown RBP13.14□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Clcn1Q64347 994 aa13.13□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Ak9G3UYQ4 1894 aa13.13□□□□□ -0.31
Ctc1-202ENSMUST00000116359 4930567H17RikQ3V0K5 233 aa13.13□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Trim26Q99PN3 545 aa13.13□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Pcf11G3X9Z4 1553 aa13.13□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Pdia4P08003 638 aaKnown RBP13.12□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Chic2Q9D9G3 165 aa13.12□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Pla2r1Q62028 1487 aa13.11□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Ripk4Q9ERK0 786 aa13.1□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Dennd4bQ3U1Y4 1499 aa13.1□□□□□ -0.31
Ctc1-202ENSMUST00000116359 SynmQ70IV5 1561 aa13.1□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Mbd3Q9Z2D8 285 aaKnown RBP13.09□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Erich3F6QRE9 1637 aa13.09□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Tnnt2P50752 301 aa13.09□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Plekhg5Q66T02 1073 aa13.09□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Mcm4P49717 862 aa13.08□□□□□ -0.31
Ctc1-202ENSMUST00000116359 Antxr1Q9CZ52 562 aa13.08□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Trim44Q9QXA7 346 aa13.08□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Ankrd26Q811D2 1581 aa13.08□□□□□ -0.32
Ctc1-202ENSMUST00000116359 WrnO09053 1401 aa13.08□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Mak16Q8BGS0 296 aaKnown RBP13.08□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Rpgrip1lQ8CG73 1264 aa13.08□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Mphosph9A6H5Y1 991 aa13.07□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Usp47Q8BY87 1376 aa13.07□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Smc5Q8CG46 1101 aaKnown RBP13.06□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Myom3A2ABU4 1439 aa13.06□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Pbrm1Q8BSQ9 1634 aaKnown RBP13.06□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Erbb4Q61527 1308 aa13.06□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Ddrgk1Q80WW9 315 aa13.06□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Ccdc183A2AJB1 534 aa13.05□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Carmil1Q6EDY6 1374 aa13.05□□□□□ -0.32
Ctc1-202ENSMUST00000116359 SlkO54988 1233 aa13.05□□□□□ -0.32
Ctc1-202ENSMUST00000116359 PxdnQ3UQ28 1475 aa13.04□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Rock2P70336 1388 aa13.04□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Map3k1P53349 1493 aa13.04□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Zscan21Q07231 555 aa13.03□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Ythdc1E9Q5K9 736 aaKnown RBP13.03□□□□□ -0.32
Ctc1-202ENSMUST00000116359 A2mQ6GQT1 1474 aa13.03□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Dnajc14Q921R4 703 aa13.03□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Apbb1Q9QXJ1 710 aa13.03□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Dhx16G3X8X0 1044 aaKnown RBP13.02□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Tmc1Q8R4P5 757 aa13.02□□□□□ -0.32
Ctc1-202ENSMUST00000116359 Lekr1B2RVN1 116 aa13.02□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Ssh1Q76I79 1042 aa13.02□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Dcaf11Q91VU6 549 aa13.02□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Cwc22Q8C5N3 908 aaKnown RBP13.02□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Gys2Q8VCB3 704 aa13.02□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Abca5Q8K448 1642 aa13.01□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Sptbn5F6UCX4 1208 aa13.01□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Fbxo2Q80UW2 297 aa13.01□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Gm7298A0A0N4SVU1 1476 aa13.01□□□□□ -0.33
Ctc1-202ENSMUST00000116359 DekQ7TNV0 380 aaKnown RBP13□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Q7TT23 1179 aa13□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Tnpo1Q8BFY9 898 aaKnown RBP13□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Tshz2Q68FE9 1030 aa13□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Mapk8ip3Q9ESN9 1337 aa13□□□□□ -0.33
Ctc1-202ENSMUST00000116359 MyclP10166 368 aa12.99□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Pkd2O35245 966 aa12.99□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Kif21bQ9QXL1 1668 aa12.98□□□□□ -0.33
Ctc1-202ENSMUST00000116359 VgfQ0VGU4 617 aa12.98□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Safb2Q80YR5 991 aaKnown RBP12.98□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Fhod3Q76LL6 1578 aa12.98□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Mroh2bQ7M6Y6 1581 aa12.98□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Rwdd1Q9CQK7 243 aa12.97□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Rprd2Q6NXI6 1469 aaKnown RBP12.97□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Gse1Q3U3C9 1213 aa12.97□□□□□ -0.33
Ctc1-202ENSMUST00000116359 WizO88286 1684 aaKnown RBP12.97□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Plcb2A3KGF7 1181 aa12.97□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Mtus2Q3UHD3 1353 aa12.96□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Cyb5rlB1AS42 316 aa12.96□□□□□ -0.33
Ctc1-202ENSMUST00000116359 Lmo7E9PYF4 1699 aaKnown RBP12.96□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Rundc1Q0VDN7 615 aa12.96□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Zmym3Q9JLM4 1370 aa12.95□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Dapk1Q80YE7 1442 aa12.95□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Mknk2Q8CDB0 459 aa12.94□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Setd1bQ8CFT2 1985 aa12.93□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Setbp1Q9Z180 1582 aa12.93□□□□□ -0.34
Ctc1-202ENSMUST00000116359 AI481877A2ALV5 1481 aa12.92□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Catsper2A2ARP9 588 aa12.92□□□□□ -0.34
Ctc1-202ENSMUST00000116359 Peg3Q3URU2 1571 aa12.92□□□□□ -0.34
Ctc1-202ENSMUST00000116359 CrbnQ8C7D2 445 aa12.92□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms