RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Ppargc1bQ8VHJ7 1014 aa14.26□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Nos1Q9Z0J4 1429 aa14.26□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Hecw1Q8K4P8 1604 aa14.26□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 MyclP10166 368 aa14.26□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Cfap65Q3V0B4 1847 aa14.25□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Dip2cE9PWR4 1557 aa14.25□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Mast1Q9R1L5 1570 aa14.25□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Gli2Q0VGT2 1544 aa14.24□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Atp10aO54827 1508 aa14.23□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Ankrd36D3Z4K0 1415 aa14.23□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Usp47Q8BY87 1376 aa14.23□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Znf518aB2RRF6 1478 aaKnown RBP14.22□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Naip6Q9JIB6 1403 aa14.22□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Grwd1Q810D6 446 aaKnown RBP14.22□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Usp54Q8BL06 1588 aaKnown RBP14.22□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 Kdm5cP41230 1554 aa14.21□□□□□ -0.13
Ccdc38-201ENSMUST00000092215 NpatQ8BMA5 1420 aa14.2□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 RereQ80TZ9 1558 aa14.19□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Hecw2Q6I6G8 1578 aa14.19□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Mroh3A0A1D5RM54 893 aa14.19□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Myom3A2ABU4 1439 aa14.19□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Neurl4Q5NCX5 1563 aa14.18□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Ttc21bQ0HA38 1315 aa14.18□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Xrn1P97789 1719 aaKnown RBP14.18□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Os9Q8K2C7 672 aa14.18□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Supt6hQ62383 1726 aaKnown RBP14.18□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Nsd2Q8BVE8 1365 aa14.17□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Zbtb4Q5F293 982 aa14.17□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Sall3Q62255 1320 aa14.16□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Atp7aQ64430 1491 aa14.15□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Asxl1P59598 1514 aa14.15□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Kif1bQ60575 1816 aaKnown RBP14.15□□□□□ -0.14
Ccdc38-201ENSMUST00000092215 Atp1b4Q99ME6 356 aa14.14□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Trpm2Q91YD4 1506 aa14.14□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 P3h3Q8CG70 732 aa14.13□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 PtprgQ05909 1442 aa14.13□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Kdm2aP59997 1161 aa14.13□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Ylpm1Q9R0I7 1386 aaKnown RBP14.12□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 ShprhQ7TPQ3 1674 aa14.12□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Aebp2Q9Z248 504 aaKnown RBP14.11□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Naip5Q9R016 1403 aa14.11□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Ifit1bl1D3Z6F0 470 aa14.1□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Hdac5Q9Z2V6 1113 aa14.1□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Fhod3Q76LL6 1578 aa14.1□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Cdc42bpgQ80UW5 1551 aa14.1□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Kiaa0556Q8C753 1610 aa14.1□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Qser1A2BIE1 1698 aa14.09□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Cul9Q80TT8 1865 aa14.09□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Rsph4aQ8BYM7 716 aa14.09□□□□□ -0.15
Ccdc38-201ENSMUST00000092215 Rprd2Q6NXI6 1469 aaKnown RBP14.08□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Washc2Q6PGL7 1334 aa14.07□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 ErbinQ80TH2 1402 aa14.07□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Gm13695A2AK44 830 aa14.07□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Abca17E9PX95 1733 aa14.07□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Abca6Q8K441 1624 aa14.06□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Plch2A2AP18 1501 aa14.06□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Lamc1P02468 1607 aaKnown RBP14.05□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Slc24a1Q91WD8 1130 aa14.05□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Pik3c2gO70167 1506 aa14.05□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Mapk8ip2Q9ERE9 830 aa14.04□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Myo5cE9Q1F5 1742 aa14.03□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Edc4Q3UJB9 1406 aaKnown RBP14.02□□□□□ -0.16
Ccdc38-201ENSMUST00000092215 Kif14L0N7N1 1674 aaKnown RBP14.02□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Sin3aQ60520 1274 aaKnown RBP14.02□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Topbp1Q6ZQF0 1515 aa14.02□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Prex1Q69ZK0 1650 aa14.01□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Txndc2Q6P902 515 aa14.01□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Tarbp1E9Q368 1579 aa14.01□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Rundc1Q0VDN7 615 aa14□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Robo2Q7TPD3 1470 aa14□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Gm20521D3Z5F7 333 aa14□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Srpk2O54781 681 aaKnown RBP14□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Hfm1D3Z4R1 1434 aa13.99□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Card11Q8CIS0 1159 aa13.99□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Arid4bA2CG63 1314 aaKnown RBP13.98□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Uggt2E9Q4X2 1504 aa13.98□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 AnkarA2RT91 1465 aa13.98□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Fan1Q69ZT1 1020 aa13.98□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Zmym4A2A791 1549 aaKnown RBP13.97□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Camsap2Q8C1B1 1461 aa13.97□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Dot1lQ6XZL8 1540 aa13.96□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Supt5hO55201 1082 aaKnown RBP13.96□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Talpid3E9PV87 1520 aa13.96□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 CltcQ68FD5 1675 aaKnown RBP13.96□□□□□ -0.17
Ccdc38-201ENSMUST00000092215 Psme1P97371 249 aa13.95□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Kif21bQ9QXL1 1668 aa13.95□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Rock1P70335 1354 aa13.94□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Stk26Q99JT2 416 aa13.94□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 AatkQ80YE4 1365 aa13.94□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Skint5A7XUY5 1461 aa13.93□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Dapk1Q80YE7 1442 aa13.93□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Shq1Q7TMX5 569 aa13.92□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Sall2Q9QX96 1004 aa13.92□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Trpm1Q2TV84 1622 aa13.92□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 DroshaQ5HZJ0 1373 aaKnown RBP13.91□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Q9D9H8 365 aa13.91□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Abcc6Q9R1S7 1498 aa13.91□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Knl1Q66JQ7 1612 aa13.91□□□□□ -0.18
Ccdc38-201ENSMUST00000092215 Adamtsl3G3UXC7 1706 aa13.89□□□□□ -0.19
Ccdc38-201ENSMUST00000092215 Ercc6l2Q9JIM3 1537 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms