RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Ak9G3UYQ4 1894 aa12.41□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 3425401B19RikD3Z1D3 1412 aa12.41□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Plcd3Q8K2J0 785 aa12.4□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Ush1cQ9ES64 910 aa12.4□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Zfp444Q3TDV8 331 aaKnown RBP12.4□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Plekhg5Q66T02 1073 aa12.4□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 TnnQ80Z71 1560 aa12.4□□□□□ -0.42
Hmgb1-201ENSMUST00000085546 Sptbn5F6UCX4 1208 aa12.39□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Arid4bA2CG63 1314 aaKnown RBP12.39□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Myom3A2ABU4 1439 aa12.39□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Dbr1Q923B1 550 aa12.38□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Slx4Q6P1D7 1565 aa12.38□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Ccdc183A2AJB1 534 aa12.38□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Gtpbp6Q3U6U5 514 aa12.38□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Trim30dE9PWL0 497 aa12.37□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 AcrbpQ3V140 540 aa12.37□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Ssh1Q76I79 1042 aa12.37□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Naip2Q9QUK4 1447 aa12.37□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 BlmO88700 1416 aa12.36□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 SlkO54988 1233 aa12.36□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Esx1O88933 382 aa12.36□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Igf1rQ60751 1373 aa12.35□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Zhx1P70121 873 aa12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Setbp1Q9Z180 1582 aa12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 AqrQ8CFQ3 1481 aaKnown RBP12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Becn1O88597 448 aa12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Chrm1P12657 460 aa12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 LrpprcQ6PB66 1392 aaKnown RBP12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 Ccnb3Q810T2 1396 aa12.34□□□□□ -0.43
Hmgb1-201ENSMUST00000085546 ScaperF8VQ70 1398 aaKnown RBP12.33□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Gm14025A2AP89 1413 aa12.33□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Rps6ka5Q8C050 863 aa12.33□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Fam114a1Q9D281 569 aa12.33□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Samd1D3YXK1 519 aa12.33□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Cald1E9QA15 768 aaKnown RBP12.32□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Mak16Q8BGS0 296 aaKnown RBP12.32□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Fez1Q8K0X8 392 aa12.32□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Dennd4bQ3U1Y4 1499 aa12.31□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Speer4f1Q9D5Q6 258 aa12.3□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Pcf11G3X9Z4 1553 aa12.3□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Rabep1O35551 862 aa12.29□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Gtpbp4Q99ME9 634 aaKnown RBP12.29□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Zmym4A2A791 1549 aaKnown RBP12.29□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Fam13bQ8K2H3 851 aa12.29□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Tnpo1Q8BFY9 898 aaKnown RBP12.29□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Wdr78E9PYY5 807 aa12.28□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Lmo7E9PYF4 1699 aaKnown RBP12.28□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Lamc1P02468 1607 aaKnown RBP12.28□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Arhgap4B1AUY3 965 aa12.28□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 MpndQ3TV65 487 aa12.28□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Gzf1Q4VBD9 706 aa12.27□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Ercc6lQ8BHK9 1240 aa12.27□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 Cwc22Q8C5N3 908 aaKnown RBP12.27□□□□□ -0.44
Hmgb1-201ENSMUST00000085546 NcapgE9PWG6 1004 aa12.26□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 BicraF8VPZ9 1578 aa12.26□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Ankrd26Q811D2 1581 aa12.26□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Arid4aF8VPQ2 1261 aaKnown RBP12.26□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Rprd2Q6NXI6 1469 aaKnown RBP12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 ArxO35085 564 aa12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Brd2Q7JJ13 798 aaKnown RBP12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Erich6bQ9D4S6 220 aa12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Gm45140A0A0N4SUM8 220 aa12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Aebp1Q640N1 1128 aa12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Pnma3Q8JZW8 466 aa12.25□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Zscan21Q07231 555 aa12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Cux1P53564 1515 aa12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 MsnP26041 577 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Zfp251Q6PCX8 632 aa12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 PtprkP35822 1457 aa12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Clasp1Q80TV8 1535 aaKnown RBP12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Plcb2A3KGF7 1181 aa12.24□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Catsper2A2ARP9 588 aa12.23□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Cers3Q1A3B0 383 aa12.23□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Tbc1d32Q3URV1 1296 aa12.23□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Bms1Q6PGF5 1284 aaKnown RBP12.23□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Ddit3P35639 168 aa12.23□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Cbx1P83917 185 aaKnown RBP12.22□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Rwdd1Q9CQK7 243 aa12.22□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Q7TT23 1179 aa12.22□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Mrvi1Q9WUX5 899 aaKnown RBP12.22□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Shroom4Q1W617 1475 aa12.22□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 1700017N19RikA0A087WPJ1 469 aa12.21□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Plekhh1Q80TI1 1356 aa12.21□□□□□ -0.45
Hmgb1-201ENSMUST00000085546 Kif3aP28741 701 aa12.21□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Dcaf11Q91VU6 549 aa12.21□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Terf2O35144 541 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Kank4Q6P9J5 1016 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Gm1043A0A140LJC2 1431 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Usp47Q8BY87 1376 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Grpel1Q99LP6 217 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Chmp4cQ9D7F7 232 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Naip6Q9JIB6 1403 aa12.2□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Prdm4Q80V63 803 aa12.19□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Atp2b3Q0VF55 1220 aa12.19□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Nol7Q9D7Z3 254 aaKnown RBP12.19□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Rpgrip1lQ8CG73 1264 aa12.19□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Mbd5B1AYB6 1498 aa12.18□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Pank3Q8R2W9 370 aa12.18□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Rad21Q61550 635 aaKnown RBP12.18□□□□□ -0.46
Hmgb1-201ENSMUST00000085546 Fez2Q6TYB5 348 aa12.18□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms