RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 MyclP10166 368 aa36.99■■■■□ 3.51
Cpsf4-201ENSMUST00000070487 Usp54Q8BL06 1588 aaKnown RBP36.95■■■■□ 3.51
Cpsf4-201ENSMUST00000070487 Zbtb7cQ8VCZ7 619 aa36.95■■■■□ 3.51
Cpsf4-201ENSMUST00000070487 Brwd3A2AHJ4 1799 aa36.94■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 Vps8Q0P5W1 1427 aa36.93■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 Myom2Q14BI5 1463 aa36.92■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 Trpm2Q91YD4 1506 aa36.89■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 Clstn2Q9ER65 966 aa36.88■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 Naip5Q9R016 1403 aa36.88■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 Supt6hQ62383 1726 aaKnown RBP36.88■■■■□ 3.5
Cpsf4-201ENSMUST00000070487 PtprmP28828 1452 aa36.88■■■■□ 3.49
Cpsf4-201ENSMUST00000070487 Abca6Q8K441 1624 aa36.88■■■■□ 3.49
Cpsf4-201ENSMUST00000070487 Pde4cQ3UEI1 686 aa36.86■■■■□ 3.49
Cpsf4-201ENSMUST00000070487 Fhad1A6PWD2 1420 aa36.85■■■■□ 3.49
Cpsf4-201ENSMUST00000070487 Hnrnpul2Q00PI9 745 aaKnown RBP36.83■■■■□ 3.49
Cpsf4-201ENSMUST00000070487 ShprhQ7TPQ3 1674 aa36.82■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 Nup155Q99P88 1391 aaKnown RBP36.79■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 CltcQ68FD5 1675 aaKnown RBP36.78■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 AlkP97793 1621 aa36.78■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 Kif1bQ60575 1816 aaKnown RBP36.78■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 Cyb5rlB1AS42 316 aa36.77■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 Map4P27546 1125 aaKnown RBP36.77■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 Ube2uB1AUC4 352 aa36.76■■■■□ 3.48
Cpsf4-201ENSMUST00000070487 Myo5cE9Q1F5 1742 aa36.75■■■■□ 3.47
Cpsf4-201ENSMUST00000070487 Zfp644E9QA22 1323 aa36.75■■■■□ 3.47
Cpsf4-201ENSMUST00000070487 RictorQ6QI06 1708 aa36.73■■■■□ 3.47
Cpsf4-201ENSMUST00000070487 Knl1Q66JQ7 1612 aa36.7■■■■□ 3.47
Cpsf4-201ENSMUST00000070487 Ahdc1Q6PAL7 1594 aaKnown RBP36.66■■■■□ 3.46
Cpsf4-201ENSMUST00000070487 Arhgap23Q69ZH9 1483 aa36.64■■■■□ 3.46
Cpsf4-201ENSMUST00000070487 Dip2bQ3UH60 1574 aa36.63■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Prex1Q69ZK0 1650 aa36.62■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 4930407I10RikD3Z5T8 1512 aa36.62■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Med14A2ABV5 1459 aaKnown RBP36.61■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Gm13697A2AK42 830 aa36.6■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Hfm1D3Z4R1 1434 aa36.59■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Adamts7Q68SA9 1657 aa36.59■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Ttll5Q8CHB8 1328 aa36.58■■■■□ 3.45
Cpsf4-201ENSMUST00000070487 Robo2Q7TPD3 1470 aa36.57■■■■□ 3.44
Cpsf4-201ENSMUST00000070487 Bcl9Q9D219 1425 aa36.55■■■■□ 3.44
Cpsf4-201ENSMUST00000070487 Ylpm1Q9R0I7 1386 aaKnown RBP36.55■■■■□ 3.44
Cpsf4-201ENSMUST00000070487 Ttc21bQ0HA38 1315 aa36.54■■■■□ 3.44
Cpsf4-201ENSMUST00000070487 Myom3A2ABU4 1439 aa36.51■■■■□ 3.44
Cpsf4-201ENSMUST00000070487 Nsd2Q8BVE8 1365 aa36.51■■■■□ 3.43
Cpsf4-201ENSMUST00000070487 Asxl1P59598 1514 aa36.49■■■■□ 3.43
Cpsf4-201ENSMUST00000070487 PtprgQ05909 1442 aa36.46■■■■□ 3.43
Cpsf4-201ENSMUST00000070487 Ccer2J3QPU5 274 aa36.46■■■■□ 3.43
Cpsf4-201ENSMUST00000070487 Cd109Q8R422 1442 aa36.45■■■■□ 3.43
Cpsf4-201ENSMUST00000070487 AnkarA2RT91 1465 aa36.44■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Abcc6Q9R1S7 1498 aa36.44■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Trak1Q6PD31 939 aa36.44■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Tmem131lQ3U3D7 1597 aa36.43■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Mphosph9A6H5Y1 991 aa36.41■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Ercc6l2Q9JIM3 1537 aa36.4■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Topaz1E5FYH1 1653 aa36.38■■■■□ 3.42
Cpsf4-201ENSMUST00000070487 Mier1Q5UAK0 511 aa36.37■■■■□ 3.41
Cpsf4-201ENSMUST00000070487 GphnQ8BUV3 769 aaKnown RBP36.35■■■■□ 3.41
Cpsf4-201ENSMUST00000070487 Akap12Q9WTQ5 1684 aa36.34■■■■□ 3.41
Cpsf4-201ENSMUST00000070487 Lamc1P02468 1607 aaKnown RBP36.29■■■■□ 3.4
Cpsf4-201ENSMUST00000070487 Adgrb3Q80ZF8 1522 aa36.26■■■■□ 3.4
Cpsf4-201ENSMUST00000070487 Skint5A7XUY5 1461 aa36.23■■■■□ 3.39
Cpsf4-201ENSMUST00000070487 Atp7aQ64430 1491 aa36.22■■■■□ 3.39
Cpsf4-201ENSMUST00000070487 Tarbp1E9Q368 1579 aa36.21■■■■□ 3.39
Cpsf4-201ENSMUST00000070487 Dip2aQ8BWT5 1523 aa36.21■■■■□ 3.39
Cpsf4-201ENSMUST00000070487 Erich6D3Z6S9 713 aa36.21■■■■□ 3.39
Cpsf4-201ENSMUST00000070487 Ino80Q6ZPV2 1559 aa36.2■■■■□ 3.39
Cpsf4-201ENSMUST00000070487 Tecpr2Q3UH45 1423 aa36.2■■■■□ 3.38
Cpsf4-201ENSMUST00000070487 Hdac5Q9Z2V6 1113 aa36.16■■■■□ 3.38
Cpsf4-201ENSMUST00000070487 Chd2E9PZM4 1827 aaKnown RBP36.15■■■■□ 3.38
Cpsf4-201ENSMUST00000070487 Kdm5aQ3UXZ9 1690 aa36.15■■■■□ 3.38
Cpsf4-201ENSMUST00000070487 Iqgap3F8VQ29 1632 aa36.14■■■■□ 3.38
Cpsf4-201ENSMUST00000070487 Kif21bQ9QXL1 1668 aa36.13■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Efcab6Q6P1E8 1516 aa36.13■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Pkd2O35245 966 aa36.12■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Edc4Q3UJB9 1406 aaKnown RBP36.11■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Stk24Q99KH8 431 aa36.09■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Dhx9O70133 1380 aaKnown RBP36.08■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Scn4aQ9ER60 1841 aa36.07■■■■□ 3.37
Cpsf4-201ENSMUST00000070487 Uggt1Q6P5E4 1551 aa36.06■■■■□ 3.36
Cpsf4-201ENSMUST00000070487 DroshaQ5HZJ0 1373 aaKnown RBP36.05■■■■□ 3.36
Cpsf4-201ENSMUST00000070487 Rimbp3Q3V0F0 1606 aa36.04■■■■□ 3.36
Cpsf4-201ENSMUST00000070487 ErbinQ80TH2 1402 aa36.04■■■■□ 3.36
Cpsf4-201ENSMUST00000070487 Itsn1Q9Z0R4 1714 aa36.02■■■■□ 3.36
Cpsf4-201ENSMUST00000070487 Kif13aQ9EQW7 1749 aa36.01■■■■□ 3.36
Cpsf4-201ENSMUST00000070487 Scaf11E9PZM7 1456 aaKnown RBP35.99■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Ncoa1P70365 1447 aa35.99■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Naip7Q9JIB3 1402 aa35.99■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Prdm2A2A7B5 1709 aaKnown RBP35.98■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Arid4bA2CG63 1314 aaKnown RBP35.98■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Txndc2Q6P902 515 aa35.97■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Pip4k2bQ80XI4 416 aa35.97■■■■□ 3.35
Cpsf4-201ENSMUST00000070487 Pik3c2gO70167 1506 aa35.94■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Ankrd36D3Z4K0 1415 aa35.94■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Sall3Q62255 1320 aa35.93■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Abca8aQ8K442 1620 aa35.92■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Phlpp1Q8CHE4 1687 aa35.91■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 AatkQ80YE4 1365 aa35.9■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Rims2Q9EQZ7 1530 aa35.89■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Ppip5k1A2ARP1 1436 aa35.89■■■■□ 3.34
Cpsf4-201ENSMUST00000070487 Prrc2bQ7TPM1 1486 aaKnown RBP35.88■■■■□ 3.33
Cpsf4-201ENSMUST00000070487 Mroh1E0CZ22 1640 aa35.87■■■■□ 3.33
Retrieved 100 of 22,080 RNA–protein pairs in 56.7 ms