RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Spag9Q58A65 1321 aaKnown RBP9.79□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Liat1Q810M6 228 aa9.79□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Kif14L0N7N1 1674 aaKnown RBP9.79□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Wdr7Q920I9 1489 aa9.78□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Lrrc9Q8CDN9 1456 aa9.78□□□□□ -0.84
Clrn1-202ENSMUST00000055636 P3h3Q8CG70 732 aa9.78□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Rnf17Q99MV7 1640 aa9.78□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Fmn2Q9JL04 1578 aa9.77□□□□□ -0.84
Clrn1-202ENSMUST00000055636 Igf1rQ60751 1373 aa9.77□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Abca8bQ8K440 1620 aa9.77□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Asxl1P59598 1514 aa9.77□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Gm156Q58A37 223 aa9.77□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Pik3c2gO70167 1506 aa9.77□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Slc4a2P13808 1237 aaKnown RBP9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Mrs2Q5NCE8 434 aa9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Kif3bQ61771 747 aa9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Cdc42bpbQ7TT50 1713 aa9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Rundc1Q0VDN7 615 aa9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Pde4cQ3UEI1 686 aa9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Egfem1Q8C088 590 aa9.76□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Cd109Q8R422 1442 aa9.75□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Lemd3Q9WU40 921 aa9.75□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Trpm2Q91YD4 1506 aa9.74□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Clstn2Q9ER65 966 aa9.74□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Cep170Q6A065 1588 aa9.74□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Lamc1P02468 1607 aaKnown RBP9.74□□□□□ -0.85
Clrn1-202ENSMUST00000055636 AI481877A2ALV5 1481 aa9.73□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Kidins220E9Q9B7 1793 aa9.73□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Ncoa1P70365 1447 aa9.73□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Wwc2Q6NXJ0 1187 aa9.73□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Adgrl2Q8JZZ7 1487 aa9.73□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Dapk1Q80YE7 1442 aa9.72□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Card11Q8CIS0 1159 aa9.72□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Sall3Q62255 1320 aa9.72□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Abcc3B2RX12 1523 aa9.72□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Atp7aQ64430 1491 aa9.72□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Ifit1bl1D3Z6F0 470 aa9.71□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Kif21bQ9QXL1 1668 aa9.71□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Cfap74Q3UY96 1578 aa9.71□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Pdcd11Q6NS46 1862 aaKnown RBP9.71□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Exoc6Q8R313 802 aa9.71□□□□□ -0.85
Clrn1-202ENSMUST00000055636 Cdk13Q69ZA1 1511 aaKnown RBP9.71□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Zfyve16Q80U44 1528 aa9.71□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Prdm16A2A935 1275 aa9.7□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Slc4a3P16283 1227 aa9.7□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Kdm2aP59997 1161 aa9.7□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Kiaa1210E9Q0C6 1637 aa9.7□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Mug2P28666 1451 aa9.7□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Stk24Q99KH8 431 aa9.69□□□□□ -0.86
Clrn1-202ENSMUST00000055636 PtprgQ05909 1442 aa9.69□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Mroh3A0A1D5RM54 893 aa9.69□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Gm13695A2AK44 830 aa9.69□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Ppp1r18Q8BQ30 594 aa9.69□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Kcna4Q61423 654 aa9.69□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Abca9Q8K449 1623 aa9.68□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Dot1lQ6XZL8 1540 aa9.68□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Usp54Q8BL06 1588 aaKnown RBP9.67□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Tarbp1E9Q368 1579 aa9.67□□□□□ -0.86
Clrn1-202ENSMUST00000055636 ArxO35085 564 aa9.67□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Hdac5Q9Z2V6 1113 aa9.67□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Mast1Q9R1L5 1570 aa9.67□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Myom3A2ABU4 1439 aa9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Ptch1Q61115 1434 aa9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Kcnh8P59111 1102 aa9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Plppr3Q7TPB0 716 aa9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 PnisrA2AJT4 805 aaKnown RBP9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 NrdcQ8BHG1 1161 aa9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Os9Q8K2C7 672 aa9.66□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Ak9G3UYQ4 1894 aa9.65□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Upf2A2AT37 1269 aaKnown RBP9.65□□□□□ -0.86
Clrn1-202ENSMUST00000055636 Xrn1P97789 1719 aaKnown RBP9.64□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Ccdc27Q3V036 639 aa9.64□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Hecw1Q8K4P8 1604 aa9.64□□□□□ -0.87
Clrn1-202ENSMUST00000055636 ShprhQ7TPQ3 1674 aa9.64□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Depdc5P61460 1591 aa9.63□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Mbd5B1AYB6 1498 aa9.63□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Kif1bQ60575 1816 aaKnown RBP9.63□□□□□ -0.87
Clrn1-202ENSMUST00000055636 L3mbtl2P59178 703 aa9.62□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Edc4Q3UJB9 1406 aaKnown RBP9.62□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Adgrl3Q80TS3 1537 aa9.61□□□□□ -0.87
Clrn1-202ENSMUST00000055636 OvosQ3UU35 1456 aa9.61□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Ipo9Q91YE6 1041 aa9.61□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Col17a1Q07563 1470 aa9.61□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Ttc21bQ0HA38 1315 aa9.61□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Nos1Q9Z0J4 1429 aa9.6□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Ofd1Q80Z25 1017 aa9.6□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Cwc22Q8C5N3 908 aaKnown RBP9.6□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Prdm10Q3UTQ7 1184 aa9.59□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Polr3aB2RXC6 1390 aa9.59□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Rock1P70335 1354 aa9.59□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Neurl4Q5NCX5 1563 aa9.59□□□□□ -0.87
Clrn1-202ENSMUST00000055636 Nsd2Q8BVE8 1365 aa9.59□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Naip6Q9JIB6 1403 aa9.58□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Fan1Q69ZT1 1020 aa9.58□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Robo2Q7TPD3 1470 aa9.58□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Yeats2Q3TUF7 1407 aa9.58□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Tcerg1Q8CGF7 1100 aaKnown RBP9.57□□□□□ -0.88
Clrn1-202ENSMUST00000055636 RalgapbQ8BQZ4 1484 aa9.57□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Abca6Q8K441 1624 aa9.57□□□□□ -0.88
Clrn1-202ENSMUST00000055636 Abca17E9PX95 1733 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms