RNA–Protein interactions for RNA: ENSMUST00000055353.8

Msx3-201, Transcript of Homeobox protein MSX-3, mousemouse

TSL 1 (best) BASIC

Gene Msx3, Length 2,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3-201ENSMUST00000055353 Rtl5Q5DTT4 599 aa19.58■□□□□ 0.73
Msx3-201ENSMUST00000055353 RalgapbQ8BQZ4 1484 aa19.57■□□□□ 0.72
Msx3-201ENSMUST00000055353 Rpgrip1lQ8CG73 1264 aa19.57■□□□□ 0.72
Msx3-201ENSMUST00000055353 Erbb3Q61526 1339 aa19.55■□□□□ 0.72
Msx3-201ENSMUST00000055353 Mlh3A0A1Y7VMP7 1443 aa19.54■□□□□ 0.72
Msx3-201ENSMUST00000055353 Dot1lQ6XZL8 1540 aa19.53■□□□□ 0.72
Msx3-201ENSMUST00000055353 Asxl1P59598 1514 aa19.52■□□□□ 0.72
Msx3-201ENSMUST00000055353 Q7TT23 1179 aa19.52■□□□□ 0.72
Msx3-201ENSMUST00000055353 Rrp7aQ9D1C9 280 aaKnown RBP19.52■□□□□ 0.72
Msx3-201ENSMUST00000055353 Pelp1Q9DBD5 1123 aaKnown RBP19.51■□□□□ 0.71
Msx3-201ENSMUST00000055353 Cpsf1Q9EPU4 1441 aaKnown RBP19.5■□□□□ 0.71
Msx3-201ENSMUST00000055353 Neo1P97798 1493 aa19.49■□□□□ 0.71
Msx3-201ENSMUST00000055353 Lrriq1Q0P5X1 1673 aa19.49■□□□□ 0.71
Msx3-201ENSMUST00000055353 Polr3aB2RXC6 1390 aa19.48■□□□□ 0.71
Msx3-201ENSMUST00000055353 Ssh2Q5SW75 1423 aa19.48■□□□□ 0.71
Msx3-201ENSMUST00000055353 Caskin1Q6P9K8 1431 aa19.48■□□□□ 0.71
Msx3-201ENSMUST00000055353 Jph4Q80WT0 628 aa19.48■□□□□ 0.71
Msx3-201ENSMUST00000055353 Iqgap1Q9JKF1 1657 aaKnown RBP19.47■□□□□ 0.71
Msx3-201ENSMUST00000055353 DroshaQ5HZJ0 1373 aaKnown RBP19.46■□□□□ 0.71
Msx3-201ENSMUST00000055353 Zfp444Q3TDV8 331 aaKnown RBP19.46■□□□□ 0.71
Msx3-201ENSMUST00000055353 Rad21Q61550 635 aaKnown RBP19.46■□□□□ 0.71
Msx3-201ENSMUST00000055353 Fmn2Q9JL04 1578 aa19.46■□□□□ 0.71
Msx3-201ENSMUST00000055353 Gtf3c5Q8R2T8 520 aa19.45■□□□□ 0.7
Msx3-201ENSMUST00000055353 PtprgQ05909 1442 aa19.45■□□□□ 0.7
Msx3-201ENSMUST00000055353 Rock2P70336 1388 aa19.44■□□□□ 0.7
Msx3-201ENSMUST00000055353 Trappc8E9PWG2 1437 aa19.43■□□□□ 0.7
Msx3-201ENSMUST00000055353 Lrrc9Q8CDN9 1456 aa19.43■□□□□ 0.7
Msx3-201ENSMUST00000055353 BccipQ9CWI3 316 aa19.42■□□□□ 0.7
Msx3-201ENSMUST00000055353 Dnmt1P13864 1620 aaKnown RBP19.42■□□□□ 0.7
Msx3-201ENSMUST00000055353 Ifit1bl1D3Z6F0 470 aa19.41■□□□□ 0.7
Msx3-201ENSMUST00000055353 Zscan21Q07231 555 aa19.41■□□□□ 0.7
Msx3-201ENSMUST00000055353 Atp7aQ64430 1491 aa19.41■□□□□ 0.7
Msx3-201ENSMUST00000055353 Kank1E9Q238 1360 aa19.4■□□□□ 0.7
Msx3-201ENSMUST00000055353 Tcerg1Q8CGF7 1100 aaKnown RBP19.4■□□□□ 0.7
Msx3-201ENSMUST00000055353 Cd109Q8R422 1442 aa19.4■□□□□ 0.7
Msx3-201ENSMUST00000055353 Pank3Q8R2W9 370 aa19.4■□□□□ 0.7
Msx3-201ENSMUST00000055353 Sart1Q9Z315 806 aaKnown RBP19.4■□□□□ 0.7
Msx3-201ENSMUST00000055353 AknaQ80VW7 1404 aa19.39■□□□□ 0.69
Msx3-201ENSMUST00000055353 Inpp5dQ9ES52 1191 aa19.39■□□□□ 0.69
Msx3-201ENSMUST00000055353 Rock1P70335 1354 aa19.38■□□□□ 0.69
Msx3-201ENSMUST00000055353 Tarbp1E9Q368 1579 aa19.38■□□□□ 0.69
Msx3-201ENSMUST00000055353 Kdm5cP41230 1554 aa19.38■□□□□ 0.69
Msx3-201ENSMUST00000055353 Fancd2Q80V62 1450 aa19.38■□□□□ 0.69
Msx3-201ENSMUST00000055353 Fam208aQ69ZR9 1610 aaKnown RBP19.38■□□□□ 0.69
Msx3-201ENSMUST00000055353 Tubgcp6G5E8P0 1769 aa19.37■□□□□ 0.69
Msx3-201ENSMUST00000055353 Mak16Q8BGS0 296 aaKnown RBP19.37■□□□□ 0.69
Msx3-201ENSMUST00000055353 Adgrl2Q8JZZ7 1487 aa19.36■□□□□ 0.69
Msx3-201ENSMUST00000055353 Arhgap5P97393 1501 aa19.36■□□□□ 0.69
Msx3-201ENSMUST00000055353 PrxO55103 1391 aa19.35■□□□□ 0.69
Msx3-201ENSMUST00000055353 Clstn2Q9ER65 966 aa19.33■□□□□ 0.68
Msx3-201ENSMUST00000055353 Anp32bQ9EST5 272 aaKnown RBP19.33■□□□□ 0.68
Msx3-201ENSMUST00000055353 Gapvd1Q6PAR5 1458 aa19.32■□□□□ 0.68
Msx3-201ENSMUST00000055353 Rusc2Q80U22 1514 aa19.32■□□□□ 0.68
Msx3-201ENSMUST00000055353 Eif4g3Q80XI3 1579 aaKnown RBP19.31■□□□□ 0.68
Msx3-201ENSMUST00000055353 Gm32742A0A1B0GT42 1604 aa19.31■□□□□ 0.68
Msx3-201ENSMUST00000055353 Hdac5Q9Z2V6 1113 aa19.31■□□□□ 0.68
Msx3-201ENSMUST00000055353 Ipo9Q91YE6 1041 aa19.3■□□□□ 0.68
Msx3-201ENSMUST00000055353 Esx1O88933 382 aa19.3■□□□□ 0.68
Msx3-201ENSMUST00000055353 Adamts13Q769J6 1426 aa19.29■□□□□ 0.68
Msx3-201ENSMUST00000055353 Setd1aE9PYH6 1716 aa19.27■□□□□ 0.68
Msx3-201ENSMUST00000055353 Rrbp1Q99PL5 1605 aaKnown RBP19.27■□□□□ 0.68
Msx3-201ENSMUST00000055353 Zscan10Q3URR7 782 aa19.27■□□□□ 0.67
Msx3-201ENSMUST00000055353 Zmym4A2A791 1549 aaKnown RBP19.26■□□□□ 0.67
Msx3-201ENSMUST00000055353 Ak9G3UYQ4 1894 aa19.26■□□□□ 0.67
Msx3-201ENSMUST00000055353 Mroh3A0A1D5RM54 893 aa19.26■□□□□ 0.67
Msx3-201ENSMUST00000055353 Erich6D3Z6S9 713 aa19.26■□□□□ 0.67
Msx3-201ENSMUST00000055353 CrbnQ8C7D2 445 aa19.25■□□□□ 0.67
Msx3-201ENSMUST00000055353 Map3k5O35099 1380 aa19.25■□□□□ 0.67
Msx3-201ENSMUST00000055353 Spag9Q58A65 1321 aaKnown RBP19.25■□□□□ 0.67
Msx3-201ENSMUST00000055353 NeflP08551 543 aa19.24■□□□□ 0.67
Msx3-201ENSMUST00000055353 Kdm2aP59997 1161 aa19.24■□□□□ 0.67
Msx3-201ENSMUST00000055353 Pde4cQ3UEI1 686 aa19.24■□□□□ 0.67
Msx3-201ENSMUST00000055353 Slc4a1apE9PX68 744 aa19.24■□□□□ 0.67
Msx3-201ENSMUST00000055353 Prkrip1Q9CWV6 186 aaKnown RBP19.23■□□□□ 0.67
Msx3-201ENSMUST00000055353 ChgaP26339 463 aaKnown RBP19.22■□□□□ 0.67
Msx3-201ENSMUST00000055353 Plch2A2AP18 1501 aa19.22■□□□□ 0.67
Msx3-201ENSMUST00000055353 Sall3Q62255 1320 aa19.22■□□□□ 0.67
Msx3-201ENSMUST00000055353 Mast1Q9R1L5 1570 aa19.21■□□□□ 0.67
Msx3-201ENSMUST00000055353 Edc4Q3UJB9 1406 aaKnown RBP19.2■□□□□ 0.66
Msx3-201ENSMUST00000055353 Upf2A2AT37 1269 aaKnown RBP19.2■□□□□ 0.66
Msx3-201ENSMUST00000055353 Cdc42bpbQ7TT50 1713 aa19.2■□□□□ 0.66
Msx3-201ENSMUST00000055353 Rnf17Q99MV7 1640 aa19.2■□□□□ 0.66
Msx3-201ENSMUST00000055353 Ccdc27Q3V036 639 aa19.2■□□□□ 0.66
Msx3-201ENSMUST00000055353 Mink1Q9JM52 1308 aa19.2■□□□□ 0.66
Msx3-201ENSMUST00000055353 Tmf1B9EKI3 1091 aa19.19■□□□□ 0.66
Msx3-201ENSMUST00000055353 B4galnt3Q6L8S8 986 aa19.18■□□□□ 0.66
Msx3-201ENSMUST00000055353 Ppp2r1aQ76MZ3 589 aa19.18■□□□□ 0.66
Msx3-201ENSMUST00000055353 Kif16bB1AVY7 1312 aa19.18■□□□□ 0.66
Msx3-201ENSMUST00000055353 Tex14Q7M6U3 1450 aa19.17■□□□□ 0.66
Msx3-201ENSMUST00000055353 Ttll13A4Q9F6 804 aa19.17■□□□□ 0.66
Msx3-201ENSMUST00000055353 Fgd6Q69ZL1 1399 aa19.17■□□□□ 0.66
Msx3-201ENSMUST00000055353 Tulp4Q9JIL5 1547 aa19.17■□□□□ 0.66
Msx3-201ENSMUST00000055353 AI481877A2ALV5 1481 aa19.16■□□□□ 0.66
Msx3-201ENSMUST00000055353 Srcin1Q9QWI6 1250 aa19.16■□□□□ 0.66
Msx3-201ENSMUST00000055353 Ppip5k1A2ARP1 1436 aa19.16■□□□□ 0.66
Msx3-201ENSMUST00000055353 Apbb1Q9QXJ1 710 aa19.15■□□□□ 0.66
Msx3-201ENSMUST00000055353 Pdcd11Q6NS46 1862 aaKnown RBP19.15■□□□□ 0.66
Msx3-201ENSMUST00000055353 Gm14025A2AP89 1413 aa19.14■□□□□ 0.65
Msx3-201ENSMUST00000055353 Cep170Q6A065 1588 aa19.13■□□□□ 0.65
Msx3-201ENSMUST00000055353 Robo2Q7TPD3 1470 aa19.13■□□□□ 0.65
Retrieved 100 of 22,080 RNA–protein pairs in 72.4 ms