RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Casq1O09165 405 aa13.22□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Map4P27546 1125 aaKnown RBP13.22□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Gtf3c5Q8R2T8 520 aa13.22□□□□□ -0.29
Nipbl-201ENSMUST00000052965 Kif4P33174 1231 aa13.21□□□□□ -0.3
Nipbl-201ENSMUST00000052965 DmtnQ9WV69 405 aa13.21□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Tpm3P21107 285 aaKnown RBP13.2□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Rpap1Q80TE0 1409 aa13.2□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Cgnl1Q6AW69 1298 aa13.2□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Fam13bQ8K2H3 851 aa13.2□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Stk24Q99KH8 431 aa13.2□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Pnmal2G3X9N3 661 aa13.19□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Golga2Q921M4 999 aa13.19□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Podxl2Q8CAE9 603 aa13.19□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Sf3a1Q8K4Z5 791 aaKnown RBP13.19□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Filip1lQ6P6L0 1131 aa13.19□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Hmgn5Q9JL35 406 aa13.18□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Ak7Q9D2H2 614 aa13.17□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Znf771Q8BJ90 317 aa13.17□□□□□ -0.3
Nipbl-201ENSMUST00000052965 CgnP59242 1191 aa13.17□□□□□ -0.3
Nipbl-201ENSMUST00000052965 GorabQ8BRM2 368 aa13.17□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Eif2s2Q99L45 331 aaKnown RBP13.17□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Washc2Q6PGL7 1334 aa13.17□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Stard8Q8K031 1019 aa13.16□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Ftsj3Q9DBE9 838 aaKnown RBP13.16□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Sh3bp5Q9Z131 463 aa13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Carmil1Q6EDY6 1374 aa13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Gtf2e1Q9D0D5 440 aa13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Sin3aQ60520 1274 aaKnown RBP13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Fez1Q8K0X8 392 aa13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Ifit1bl1D3Z6F0 470 aa13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Utp3Q9JI13 469 aaKnown RBP13.15□□□□□ -0.3
Nipbl-201ENSMUST00000052965 Rock1P70335 1354 aa13.14□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Iffo2Q8R2V2 512 aa13.14□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Ccar1Q8CH18 1146 aaKnown RBP13.14□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Trak1Q6PD31 939 aa13.14□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Irx6Q9ER75 438 aa13.14□□□□□ -0.31
Nipbl-201ENSMUST00000052965 TimelessQ9R1X4 1197 aa13.13□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Cecr2E9Q2Z1 1453 aa13.13□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Q8BT18 775 aa13.13□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Cdkn1cP49919 348 aa13.12□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Tpd52l1O54818 204 aa13.12□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Nup155Q99P88 1391 aaKnown RBP13.12□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Pak3Q61036 559 aa13.12□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Iqgap2Q3UQ44 1575 aa13.11□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Cluap1Q8R3P7 413 aa13.11□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Usp47Q8BY87 1376 aa13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Cabp1Q9JLK7 227 aa13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Top2aQ01320 1528 aaKnown RBP13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Atl3Q91YH5 541 aa13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Dusp27Q148W8 1138 aa13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Rtf1A2AQ19 715 aaKnown RBP13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Znhit6Q3UFB2 460 aaKnown RBP13.1□□□□□ -0.31
Nipbl-201ENSMUST00000052965 1700019A02RikA0A087WPV9 146 aa13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Cnga1P29974 684 aa13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 CrbnQ8C7D2 445 aa13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Rbm10Q99KG3 930 aaKnown RBP13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Ttll13A4Q9F6 804 aa13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Anapc15P60007 132 aa13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Paxip1Q6NZQ4 1056 aa13.09□□□□□ -0.31
Nipbl-201ENSMUST00000052965 Mns1Q61884 491 aa13.08□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Rassf8Q8CJ96 419 aa13.08□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Plekhh1Q80TI1 1356 aa13.08□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Ccdc183A2AJB1 534 aa13.08□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Nap1l3Q794H2 544 aa13.08□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Tpm1P58771 284 aa13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 NaspQ99MD9 773 aaKnown RBP13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Cux2P70298 1426 aa13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Dixdc1Q80Y83 711 aa13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Trim55G3X8Y1 545 aa13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Sh3bgrQ9WUZ7 214 aa13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Kif7B7ZNG0 1348 aa13.07□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Atad2bE9Q166 1460 aaKnown RBP13.06□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Rfx1P48377 963 aa13.06□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Chaf1aQ9QWF0 911 aa13.06□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Ccer1Q9CQL2 403 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 U2af1Q9D883 239 aaKnown RBP13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Srcin1Q9QWI6 1250 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 AknaQ80VW7 1404 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 NcapgE9PWG6 1004 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Ccnb3Q810T2 1396 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Pdcl2Q78Y63 240 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Gprasp1Q5U4C1 1347 aa13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Dhx8A2A4P0 1244 aaKnown RBP13.05□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Gps2Q921N8 327 aa13.04□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Tmco5bQ80X59 307 aa13.04□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Def6Q8C2K1 630 aa13.04□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Spag9Q58A65 1321 aaKnown RBP13.04□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Trim58Q5NCC9 485 aa13.04□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Tomm22Q9CPQ3 142 aa13.03□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Ksr2Q3UVC0 959 aa13.03□□□□□ -0.32
Nipbl-201ENSMUST00000052965 KinQ8K339 391 aa13.03□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Eif4g2Q62448 906 aaKnown RBP13.03□□□□□ -0.32
Nipbl-201ENSMUST00000052965 NgefQ8CHT1 710 aa13.03□□□□□ -0.32
Nipbl-201ENSMUST00000052965 Dcaf11Q91VU6 549 aa13.03□□□□□ -0.32
Nipbl-201ENSMUST00000052965 MecomP14404 1042 aa13.02□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Ncoa2Q61026 1462 aa13.02□□□□□ -0.33
Nipbl-201ENSMUST00000052965 Gcom1E9PZ54 550 aa13.01□□□□□ -0.33
Nipbl-201ENSMUST00000052965 MyzapQ3UIJ9 466 aa13.01□□□□□ -0.33
Nipbl-201ENSMUST00000052965 CrebrfQ8CDG5 640 aaKnown RBP13.01□□□□□ -0.33
Nipbl-201ENSMUST00000052965 U2surpQ6NV83 1029 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 195.9 ms