RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Washc2Q6PGL7 1334 aa10.64□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Rrbp1Q99PL5 1605 aaKnown RBP10.64□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 SphkapQ6NSW3 1687 aa10.63□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Cdc42bpaQ3UU96 1719 aa10.63□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Srcin1Q9QWI6 1250 aa10.63□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 AlkP97793 1621 aa10.62□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Rad21Q61550 635 aaKnown RBP10.62□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Stag3O70576 1240 aa10.62□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Tnnt3Q9QZ47 272 aa10.61□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Nsd2Q8BVE8 1365 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Afap1Q80YS6 731 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Rock2P70336 1388 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Myom3A2ABU4 1439 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Nlrp6Q91WS2 869 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Gtf2e1Q9D0D5 440 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 AI481877A2ALV5 1481 aa10.6□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 MyclP10166 368 aa10.59□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Smg6P61406 1418 aaKnown RBP10.59□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Atp7aQ64430 1491 aa10.59□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Pik3c2gO70167 1506 aa10.59□□□□□ -0.71
Ccdc39-201ENSMUST00000029222 Ttc21bQ0HA38 1315 aa10.58□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Slc4a1apE9PX68 744 aa10.58□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 ErbinQ80TH2 1402 aa10.58□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 IqubQ8CDK3 788 aa10.57□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Pank3Q8R2W9 370 aa10.57□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Inpp5dQ9ES52 1191 aa10.57□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Usp40Q8BWR4 1235 aa10.57□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 OvosQ3UU35 1456 aa10.56□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Exosc9Q9JHI7 438 aaKnown RBP10.54□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Lrrc9Q8CDN9 1456 aa10.54□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Ecm2Q5FW85 670 aa10.54□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Fam208aQ69ZR9 1610 aaKnown RBP10.53□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Ptch1Q61115 1434 aa10.53□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Adgrl2Q8JZZ7 1487 aa10.53□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Txndc2Q6P902 515 aa10.53□□□□□ -0.72
Ccdc39-201ENSMUST00000029222 Shq1Q7TMX5 569 aa10.52□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Ofd1Q80Z25 1017 aa10.52□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Zcchc11B2RX14 1644 aaKnown RBP10.52□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Cep170Q6A065 1588 aa10.52□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Tmf1B9EKI3 1091 aa10.51□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Puf60Q3UEB3 564 aaKnown RBP10.51□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Cfap74Q3UY96 1578 aa10.51□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Dcaf11Q91VU6 549 aa10.51□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Chd1P40201 1711 aa10.51□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 SafbD3YXK2 937 aaKnown RBP10.5□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 PtprgQ05909 1442 aa10.5□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Fmn2Q9JL04 1578 aa10.5□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Znf316Q6PGE4 1016 aa10.5□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Adgrl3Q80TS3 1537 aa10.5□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Utp14aQ640M1 767 aaKnown RBP10.49□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Q9D9H8 365 aa10.49□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Slc4a2P13808 1237 aaKnown RBP10.49□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Psme1P97371 249 aa10.49□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Mug2P28666 1451 aa10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Ncoa1P70365 1447 aa10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Arid4bA2CG63 1314 aaKnown RBP10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 MlecQ6ZQI3 291 aaKnown RBP10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Polr3aB2RXC6 1390 aa10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Ylpm1Q9R0I7 1386 aaKnown RBP10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 NhsB1AV60 1647 aa10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 NgefQ8CHT1 710 aa10.48□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Calr4Q3TQS0 420 aa10.47□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Mink1Q9JM52 1308 aa10.47□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Cdk13Q69ZA1 1511 aaKnown RBP10.47□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Supt6hQ62383 1726 aaKnown RBP10.47□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Rpgrip1lQ8CG73 1264 aa10.46□□□□□ -0.73
Ccdc39-201ENSMUST00000029222 Fam184bQ0KK56 942 aa10.46□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Zscan10Q3URR7 782 aa10.46□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Q7TT23 1179 aa10.46□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Rock1P70335 1354 aa10.46□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Depdc5P61460 1591 aa10.45□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Rangap1P46061 589 aaKnown RBP10.45□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Plekhg5Q66T02 1073 aa10.45□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 CenpbP27790 599 aa10.45□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Neurod2Q62414 383 aa10.45□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Polr3glQ8R0C0 218 aa10.45□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Rnf17Q99MV7 1640 aa10.44□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Zscan21Q07231 555 aa10.44□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Abca8bQ8K440 1620 aa10.43□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Edc4Q3UJB9 1406 aaKnown RBP10.43□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Znf710Q3U288 666 aa10.43□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Gm32742A0A1B0GT42 1604 aa10.43□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Zfyve16Q80U44 1528 aa10.43□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Asxl1P59598 1514 aa10.42□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Camsap2Q8C1B1 1461 aa10.42□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Abcc3B2RX12 1523 aa10.42□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Kif14L0N7N1 1674 aaKnown RBP10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Yeats2Q3TUF7 1407 aa10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Fhod3Q76LL6 1578 aa10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Usp54Q8BL06 1588 aaKnown RBP10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 PrxO55103 1391 aa10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 DroshaQ5HZJ0 1373 aaKnown RBP10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Zranb1Q7M760 708 aa10.41□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 PnisrA2AJT4 805 aaKnown RBP10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Tarbp1E9Q368 1579 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Esx1O88933 382 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 NeflP08551 543 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Gli2Q0VGT2 1544 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Kif7B7ZNG0 1348 aa10.4□□□□□ -0.74
Ccdc39-201ENSMUST00000029222 Stard8Q8K031 1019 aa10.4□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms