RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 RalgapbQ8BQZ4 1484 aa28.75■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Ythdc2B2RR83 1445 aaKnown RBP28.74■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Tnnt3Q9QZ47 272 aa28.74■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Cd109Q8R422 1442 aa28.73■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Kif1bQ60575 1816 aaKnown RBP28.72■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Polr3aB2RXC6 1390 aa28.72■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Znf608Q56A10 1511 aa28.71■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Csrnp3P59055 597 aa28.7■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Atp7aQ64430 1491 aa28.69■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Plekhg5Q66T02 1073 aa28.69■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Cdk13Q69ZA1 1511 aaKnown RBP28.69■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Zfyve16Q80U44 1528 aa28.68■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Cep170Q6A065 1588 aa28.67■■■□□ 2.18
Cdx1-201ENSMUST00000025521 ShprhQ7TPQ3 1674 aa28.67■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Xrn1P97789 1719 aaKnown RBP28.67■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Spag9Q58A65 1321 aaKnown RBP28.66■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Usp54Q8BL06 1588 aaKnown RBP28.65■■■□□ 2.18
Cdx1-201ENSMUST00000025521 PtprtQ99M80 1454 aa28.65■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Znf710Q3U288 666 aa28.64■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Abca9Q8K449 1623 aa28.64■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Tarbp1E9Q368 1579 aa28.63■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Rundc1Q0VDN7 615 aa28.62■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Gm13695A2AK44 830 aa28.62■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Setd1aE9PYH6 1716 aa28.62■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Rock2P70336 1388 aa28.61■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Gapvd1Q6PAR5 1458 aa28.61■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Card11Q8CIS0 1159 aa28.59■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Myo5cE9Q1F5 1742 aa28.59■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Hdac5Q9Z2V6 1113 aa28.56■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Nsd2Q8BVE8 1365 aa28.55■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Washc2Q6PGL7 1334 aa28.55■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Aplp2Q06335 707 aa28.53■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Pde4cQ3UEI1 686 aa28.53■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Map3k5O35099 1380 aa28.53■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Nos1Q9Z0J4 1429 aa28.52■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Edc4Q3UJB9 1406 aaKnown RBP28.5■■■□□ 2.15
Cdx1-201ENSMUST00000025521 Grwd1Q810D6 446 aaKnown RBP28.48■■■□□ 2.15
Cdx1-201ENSMUST00000025521 Adamts13Q769J6 1426 aa28.48■■■□□ 2.15
Cdx1-201ENSMUST00000025521 Fndc1E9Q043 1732 aa28.45■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Tubgcp6G5E8P0 1769 aa28.44■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Ylpm1Q9R0I7 1386 aaKnown RBP28.43■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Znf518aB2RRF6 1478 aaKnown RBP28.42■■■□□ 2.14
Cdx1-201ENSMUST00000025521 1700123L14RikQ3V2K7 440 aa28.42■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Zbtb7cQ8VCZ7 619 aa28.42■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Tmem131lQ3U3D7 1597 aa28.41■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Hnrnpul2Q00PI9 745 aaKnown RBP28.4■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Kdm5cP41230 1554 aa28.4■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Uggt2E9Q4X2 1504 aa28.39■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Plch2A2AP18 1501 aa28.38■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Tulp4Q9JIL5 1547 aa28.38■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Topbp1Q6ZQF0 1515 aa28.36■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Pelp1Q9DBD5 1123 aaKnown RBP28.36■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Lemd3Q9WU40 921 aa28.36■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Mrs2Q5NCE8 434 aa28.35■■■□□ 2.13
Cdx1-201ENSMUST00000025521 AnkarA2RT91 1465 aa28.34■■■□□ 2.13
Cdx1-201ENSMUST00000025521 PnisrA2AJT4 805 aaKnown RBP28.34■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Ifnlr1Q8CGK5 535 aa28.33■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Exoc6Q8R313 802 aa28.32■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Abca6Q8K441 1624 aa28.31■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Pabpn1Q8CCS6 302 aaKnown RBP28.31■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Abcc6Q9R1S7 1498 aa28.31■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Slc4a2P13808 1237 aaKnown RBP28.3■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Atp10aO54827 1508 aa28.3■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Iqgap3F8VQ29 1632 aa28.29■■■□□ 2.12
Cdx1-201ENSMUST00000025521 OvosQ3UU35 1456 aa28.29■■■□□ 2.12
Cdx1-201ENSMUST00000025521 AglF8VPN4 1532 aa28.27■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Wwc2Q6NXJ0 1187 aa28.27■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Arid3cA6PWV5 409 aa28.27■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Cep152A2AUM9 1736 aaKnown RBP28.26■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Depdc5P61460 1591 aa28.25■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Ak9G3UYQ4 1894 aa28.25■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Abca8aQ8K442 1620 aa28.25■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Ifit1bl1D3Z6F0 470 aa28.24■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Prex1Q69ZK0 1650 aa28.24■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Mroh3A0A1D5RM54 893 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Kif3bQ61771 747 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 NrdcQ8BHG1 1161 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Cdc42bpgQ80UW5 1551 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Kiaa0556Q8C753 1610 aa28.22■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Prdm2A2A7B5 1709 aaKnown RBP28.2■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Pola1P33609 1465 aa28.2■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Trpm1Q2TV84 1622 aa28.19■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Ttc21bQ0HA38 1315 aa28.18■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Akap12Q9WTQ5 1684 aa28.18■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Ehbp1l1Q99MS7 1716 aa28.17■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Zmym4A2A791 1549 aaKnown RBP28.16■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Sbno1Q689Z5 1390 aa28.14■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Slc24a1Q91WD8 1130 aa28.14■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Gli2Q0VGT2 1544 aa28.14■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Clasp1Q80TV8 1535 aaKnown RBP28.14■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Arid4bA2CG63 1314 aaKnown RBP28.13■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Itsn2Q9Z0R6 1659 aa28.13■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Cul9Q80TT8 1865 aa28.12■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Adgrb3Q80ZF8 1522 aa28.11■■■□□ 2.09
Cdx1-201ENSMUST00000025521 ErbinQ80TH2 1402 aa28.11■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Efcab6Q6P1E8 1516 aa28.1■■■□□ 2.09
Cdx1-201ENSMUST00000025521 AdgbG3UZ78 1657 aa28.1■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Rims1Q99NE5 1463 aa28.1■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Tecpr2Q3UH45 1423 aa28.09■■■□□ 2.09
Cdx1-201ENSMUST00000025521 RereQ80TZ9 1558 aa28.09■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms