RNA–Protein interactions for RNA: ENSMUST00000025521.8

Cdx1-201, Transcript of Homeobox protein CDX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdx1, Length 1,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1-201ENSMUST00000025521 RalgapbQ8BQZ4 1484 aa28.75■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Ythdc2B2RR83 1445 aaKnown RBP28.74■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Tnnt3Q9QZ47 272 aa28.74■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Cd109Q8R422 1442 aa28.73■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Kif1bQ60575 1816 aaKnown RBP28.72■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Polr3aB2RXC6 1390 aa28.72■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Znf608Q56A10 1511 aa28.71■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Csrnp3P59055 597 aa28.7■■■□□ 2.19
Cdx1-201ENSMUST00000025521 Atp7aQ64430 1491 aa28.69■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Plekhg5Q66T02 1073 aa28.69■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Cdk13Q69ZA1 1511 aaKnown RBP28.69■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Zfyve16Q80U44 1528 aa28.68■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Cep170Q6A065 1588 aa28.67■■■□□ 2.18
Cdx1-201ENSMUST00000025521 ShprhQ7TPQ3 1674 aa28.67■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Xrn1P97789 1719 aaKnown RBP28.67■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Spag9Q58A65 1321 aaKnown RBP28.66■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Usp54Q8BL06 1588 aaKnown RBP28.65■■■□□ 2.18
Cdx1-201ENSMUST00000025521 PtprtQ99M80 1454 aa28.65■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Znf710Q3U288 666 aa28.64■■■□□ 2.18
Cdx1-201ENSMUST00000025521 Abca9Q8K449 1623 aa28.64■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Tarbp1E9Q368 1579 aa28.63■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Rundc1Q0VDN7 615 aa28.62■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Gm13695A2AK44 830 aa28.62■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Setd1aE9PYH6 1716 aa28.62■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Rock2P70336 1388 aa28.61■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Gapvd1Q6PAR5 1458 aa28.61■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Card11Q8CIS0 1159 aa28.59■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Myo5cE9Q1F5 1742 aa28.59■■■□□ 2.17
Cdx1-201ENSMUST00000025521 Hdac5Q9Z2V6 1113 aa28.56■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Nsd2Q8BVE8 1365 aa28.55■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Washc2Q6PGL7 1334 aa28.55■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Aplp2Q06335 707 aa28.53■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Pde4cQ3UEI1 686 aa28.53■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Map3k5O35099 1380 aa28.53■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Nos1Q9Z0J4 1429 aa28.52■■■□□ 2.16
Cdx1-201ENSMUST00000025521 Edc4Q3UJB9 1406 aaKnown RBP28.5■■■□□ 2.15
Cdx1-201ENSMUST00000025521 Grwd1Q810D6 446 aaKnown RBP28.48■■■□□ 2.15
Cdx1-201ENSMUST00000025521 Adamts13Q769J6 1426 aa28.48■■■□□ 2.15
Cdx1-201ENSMUST00000025521 Fndc1E9Q043 1732 aa28.45■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Tubgcp6G5E8P0 1769 aa28.44■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Ylpm1Q9R0I7 1386 aaKnown RBP28.43■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Znf518aB2RRF6 1478 aaKnown RBP28.42■■■□□ 2.14
Cdx1-201ENSMUST00000025521 1700123L14RikQ3V2K7 440 aa28.42■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Zbtb7cQ8VCZ7 619 aa28.42■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Tmem131lQ3U3D7 1597 aa28.41■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Hnrnpul2Q00PI9 745 aaKnown RBP28.4■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Kdm5cP41230 1554 aa28.4■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Uggt2E9Q4X2 1504 aa28.39■■■□□ 2.14
Cdx1-201ENSMUST00000025521 Plch2A2AP18 1501 aa28.38■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Tulp4Q9JIL5 1547 aa28.38■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Topbp1Q6ZQF0 1515 aa28.36■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Pelp1Q9DBD5 1123 aaKnown RBP28.36■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Lemd3Q9WU40 921 aa28.36■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Mrs2Q5NCE8 434 aa28.35■■■□□ 2.13
Cdx1-201ENSMUST00000025521 AnkarA2RT91 1465 aa28.34■■■□□ 2.13
Cdx1-201ENSMUST00000025521 PnisrA2AJT4 805 aaKnown RBP28.34■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Ifnlr1Q8CGK5 535 aa28.33■■■□□ 2.13
Cdx1-201ENSMUST00000025521 Exoc6Q8R313 802 aa28.32■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Abca6Q8K441 1624 aa28.31■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Pabpn1Q8CCS6 302 aaKnown RBP28.31■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Abcc6Q9R1S7 1498 aa28.31■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Slc4a2P13808 1237 aaKnown RBP28.3■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Atp10aO54827 1508 aa28.3■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Iqgap3F8VQ29 1632 aa28.29■■■□□ 2.12
Cdx1-201ENSMUST00000025521 OvosQ3UU35 1456 aa28.29■■■□□ 2.12
Cdx1-201ENSMUST00000025521 AglF8VPN4 1532 aa28.27■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Wwc2Q6NXJ0 1187 aa28.27■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Arid3cA6PWV5 409 aa28.27■■■□□ 2.12
Cdx1-201ENSMUST00000025521 Cep152A2AUM9 1736 aaKnown RBP28.26■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Depdc5P61460 1591 aa28.25■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Ak9G3UYQ4 1894 aa28.25■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Abca8aQ8K442 1620 aa28.25■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Ifit1bl1D3Z6F0 470 aa28.24■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Prex1Q69ZK0 1650 aa28.24■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Mroh3A0A1D5RM54 893 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Kif3bQ61771 747 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 NrdcQ8BHG1 1161 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Cdc42bpgQ80UW5 1551 aa28.23■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Kiaa0556Q8C753 1610 aa28.22■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Prdm2A2A7B5 1709 aaKnown RBP28.2■■■□□ 2.11
Cdx1-201ENSMUST00000025521 Pola1P33609 1465 aa28.2■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Trpm1Q2TV84 1622 aa28.19■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Ttc21bQ0HA38 1315 aa28.18■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Akap12Q9WTQ5 1684 aa28.18■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Ehbp1l1Q99MS7 1716 aa28.17■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Zmym4A2A791 1549 aaKnown RBP28.16■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Sbno1Q689Z5 1390 aa28.14■■■□□ 2.1
Cdx1-201ENSMUST00000025521 Slc24a1Q91WD8 1130 aa28.14■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Gli2Q0VGT2 1544 aa28.14■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Clasp1Q80TV8 1535 aaKnown RBP28.14■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Arid4bA2CG63 1314 aaKnown RBP28.13■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Itsn2Q9Z0R6 1659 aa28.13■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Cul9Q80TT8 1865 aa28.12■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Adgrb3Q80ZF8 1522 aa28.11■■■□□ 2.09
Cdx1-201ENSMUST00000025521 ErbinQ80TH2 1402 aa28.11■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Efcab6Q6P1E8 1516 aa28.1■■■□□ 2.09
Cdx1-201ENSMUST00000025521 AdgbG3UZ78 1657 aa28.1■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Rims1Q99NE5 1463 aa28.1■■■□□ 2.09
Cdx1-201ENSMUST00000025521 Tecpr2Q3UH45 1423 aa28.09■■■□□ 2.09
Cdx1-201ENSMUST00000025521 RereQ80TZ9 1558 aa28.09■■■□□ 2.09
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms