RNA–Protein interactions for RNA: ENSMUST00000005600.5

Rfx1-201, Transcript of MHC class II regulatory factor RFX1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rfx1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1-201ENSMUST00000005600 Clstn2Q9ER65 966 aa15.89■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Supt6hQ62383 1726 aaKnown RBP15.88■□□□□ 0.13
Rfx1-201ENSMUST00000005600 ChgaP26339 463 aaKnown RBP15.88■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Erbb3Q61526 1339 aa15.87■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Cdc42bpaQ3UU96 1719 aa15.86■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Abca16E9PWJ7 1678 aa15.86■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Q7TT23 1179 aa15.86■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Asxl1P59598 1514 aa15.86■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Fkbp15Q6P9Q6 1216 aaKnown RBP15.85■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Polr3aB2RXC6 1390 aa15.85■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Cpsf1Q9EPU4 1441 aaKnown RBP15.85■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Magi1Q6RHR9 1471 aa15.84■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Ccdc141E9Q8Q6 1531 aa15.84■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Mink1Q9JM52 1308 aa15.83■□□□□ 0.13
Rfx1-201ENSMUST00000005600 Kiaa1551Q5DTW7 1521 aa15.83■□□□□ 0.13
Rfx1-201ENSMUST00000005600 CanxP35564 591 aaKnown RBP15.83■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Fam163aQ8CAA5 168 aa15.83■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Iqcf3Q9D498 203 aa15.83■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Mbd3Q9Z2D8 285 aaKnown RBP15.83■□□□□ 0.12
Rfx1-201ENSMUST00000005600 B4galnt3Q6L8S8 986 aa15.81■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Rrp7aQ9D1C9 280 aaKnown RBP15.81■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Shroom2A2ALU4 1481 aa15.81■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Pank3Q8R2W9 370 aa15.81■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Irx3P81067 507 aa15.8■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Mlh3A0A1Y7VMP7 1443 aa15.8■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Ttll13A4Q9F6 804 aa15.79■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Rock1P70335 1354 aa15.79■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Inpp5dQ9ES52 1191 aa15.78■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Prex2Q3LAC4 1598 aa15.78■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Ifit1bl1D3Z6F0 470 aa15.78■□□□□ 0.12
Rfx1-201ENSMUST00000005600 Caskin1Q6P9K8 1431 aa15.77■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Zmym4A2A791 1549 aaKnown RBP15.76■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Trpm2Q91YD4 1506 aa15.76■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Gtf3c3Q3TMP1 882 aa15.76■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Mapkbp1Q6NS57 1503 aa15.75■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Nup160Q9Z0W3 1402 aaKnown RBP15.75■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Tmf1B9EKI3 1091 aa15.75■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Dbr1Q923B1 550 aa15.75■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Esx1O88933 382 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 CrbnQ8C7D2 445 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Rwdd1Q9CQK7 243 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Zscan10Q3URR7 782 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Pknox2Q8BG99 474 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 PrxO55103 1391 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 TnikP83510 1323 aa15.74■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Plcd4Q8K3R3 807 aa15.73■□□□□ 0.11
Rfx1-201ENSMUST00000005600 EspnQ9ET47 871 aa15.73■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Setd1bQ8CFT2 1985 aa15.73■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Cd109Q8R422 1442 aa15.72■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Kif16bB1AVY7 1312 aa15.72■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Pbrm1Q8BSQ9 1634 aaKnown RBP15.72■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Fgd1P52734 960 aa15.72■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Dot1lQ6XZL8 1540 aa15.72■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Chmp5Q9D7S9 219 aa15.71■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Apbb1Q9QXJ1 710 aa15.71■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Mroh3A0A1D5RM54 893 aa15.71■□□□□ 0.11
Rfx1-201ENSMUST00000005600 Fmn2Q9JL04 1578 aa15.7■□□□□ 0.1
Rfx1-201ENSMUST00000005600 PtprgQ05909 1442 aa15.7■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Os9Q8K2C7 672 aa15.7■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Kdm5cP41230 1554 aa15.7■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Dnai1Q8C0M8 701 aa15.7■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Iqgap1Q9JKF1 1657 aaKnown RBP15.7■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Nlrp6Q91WS2 869 aa15.69■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Abcc2Q8VI47 1543 aa15.69■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Arid4bA2CG63 1314 aaKnown RBP15.69■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Erich6D3Z6S9 713 aa15.68■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Gapvd1Q6PAR5 1458 aa15.68■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Sart3Q9JLI8 962 aaKnown RBP15.68■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Ppm1gQ61074 542 aa15.68■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Slc4a1apE9PX68 744 aa15.68■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Mroh2aD3Z750 1679 aa15.67■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Lrrc9Q8CDN9 1456 aa15.67■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Setd1aE9PYH6 1716 aa15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Atp7aQ64430 1491 aa15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 NudcO35685 332 aaKnown RBP15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Sart1Q9Z315 806 aaKnown RBP15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Ssh2Q5SW75 1423 aa15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Adgrl2Q8JZZ7 1487 aa15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Ak9G3UYQ4 1894 aa15.66■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Plekhh1Q80TI1 1356 aa15.65■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Ppp2r1aQ76MZ3 589 aa15.65■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Speer4f1Q9D5Q6 258 aa15.65■□□□□ 0.1
Rfx1-201ENSMUST00000005600 Kdm2aP59997 1161 aa15.64■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Neurod2Q62414 383 aa15.64■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Jph4Q80WT0 628 aa15.64■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Srcin1Q9QWI6 1250 aa15.64■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Eif4g3Q80XI3 1579 aaKnown RBP15.63■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Trim30dE9PWL0 497 aa15.63■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Nkx1-2P42580 305 aa15.62■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Tex14Q7M6U3 1450 aa15.62■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Plch2A2AP18 1501 aa15.62■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Arhgap5P97393 1501 aa15.62■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Mre11Q61216 706 aa15.62■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Rab3gap2Q8BMG7 1366 aa15.62■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Fam184bQ0KK56 942 aa15.61■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Mapk8ip3Q9ESN9 1337 aa15.61■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Hsp90ab1P11499 724 aaKnown RBP15.6■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Kdm2bQ6P1G2 1309 aa15.6■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Tarbp1E9Q368 1579 aa15.59■□□□□ 0.09
Rfx1-201ENSMUST00000005600 Spag9Q58A65 1321 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 13.5 ms