RNA–Protein interactions for RNA: ENSMUST00000004507.10

Ddx56-201, Transcript of Probable ATP-dependent RNA helicase DDX56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx56, Length 1,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56-201ENSMUST00000004507 Hecw2Q6I6G8 1578 aa15.87■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Lamc1P02468 1607 aaKnown RBP15.87■□□□□ 0.13
Ddx56-201ENSMUST00000004507 AlkP97793 1621 aa15.87■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Hnrnpul2Q00PI9 745 aaKnown RBP15.87■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Xrn1P97789 1719 aaKnown RBP15.87■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Atp10aO54827 1508 aa15.86■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Kif21bQ9QXL1 1668 aa15.86■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Ssh2Q5SW75 1423 aa15.86■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Dip2cE9PWR4 1557 aa15.86■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Synj2Q9D2G5 1434 aa15.86■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Zbtb7cQ8VCZ7 619 aa15.85■□□□□ 0.13
Ddx56-201ENSMUST00000004507 RereQ80TZ9 1558 aa15.85■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Smg6P61406 1418 aaKnown RBP15.84■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Nos1Q9Z0J4 1429 aa15.84■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Rprd2Q6NXI6 1469 aaKnown RBP15.84■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Znf710Q3U288 666 aa15.84■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Abca17E9PX95 1733 aa15.83■□□□□ 0.13
Ddx56-201ENSMUST00000004507 Spag9Q58A65 1321 aaKnown RBP15.82■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Sin3aQ60520 1274 aaKnown RBP15.82■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Yeats2Q3TUF7 1407 aa15.82■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Usp47Q8BY87 1376 aa15.8■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Nup155Q99P88 1391 aaKnown RBP15.79■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Usp54Q8BL06 1588 aaKnown RBP15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Pik3c2gO70167 1506 aa15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Trpm2Q91YD4 1506 aa15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Cfap65Q3V0B4 1847 aa15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Pkd2O35245 966 aa15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Dnajc5gQ8C632 165 aa15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Cdc42bpgQ80UW5 1551 aa15.78■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Gm38655A0A286YDK6 273 aa15.77■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Kif3bQ61771 747 aa15.77■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Plppr3Q7TPB0 716 aa15.77■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Supt6hQ62383 1726 aaKnown RBP15.77■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Znf518aB2RRF6 1478 aaKnown RBP15.77■□□□□ 0.12
Ddx56-201ENSMUST00000004507 Qser1A2BIE1 1698 aa15.77■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Map4P27546 1125 aaKnown RBP15.76■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Kif1bQ60575 1816 aaKnown RBP15.76■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Ncoa1P70365 1447 aa15.76■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Gli2Q0VGT2 1544 aa15.75■□□□□ 0.11
Ddx56-201ENSMUST00000004507 ShprhQ7TPQ3 1674 aa15.75■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Ttll5Q8CHB8 1328 aa15.75■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Clstn2Q9ER65 966 aa15.73■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Myo5cE9Q1F5 1742 aa15.73■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Kif14L0N7N1 1674 aaKnown RBP15.72■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Asxl1P59598 1514 aa15.72■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Naip6Q9JIB6 1403 aa15.72■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Trpm1Q2TV84 1622 aa15.71■□□□□ 0.11
Ddx56-201ENSMUST00000004507 Pde4cQ3UEI1 686 aa15.71■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Plch2A2AP18 1501 aa15.7■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Topbp1Q6ZQF0 1515 aa15.7■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Trak1Q6PD31 939 aa15.69■□□□□ 0.1
Ddx56-201ENSMUST00000004507 NpatQ8BMA5 1420 aa15.69■□□□□ 0.1
Ddx56-201ENSMUST00000004507 SafbD3YXK2 937 aaKnown RBP15.69■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Zmym4A2A791 1549 aaKnown RBP15.68■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Mbd5B1AYB6 1498 aa15.66■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Uggt2E9Q4X2 1504 aa15.66■□□□□ 0.1
Ddx56-201ENSMUST00000004507 PtprgQ05909 1442 aa15.65■□□□□ 0.1
Ddx56-201ENSMUST00000004507 Cd109Q8R422 1442 aa15.64■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Robo2Q7TPD3 1470 aa15.64■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Abca6Q8K441 1624 aa15.64■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Prex1Q69ZK0 1650 aa15.63■□□□□ 0.09
Ddx56-201ENSMUST00000004507 DroshaQ5HZJ0 1373 aaKnown RBP15.62■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Gm13695A2AK44 830 aa15.62■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Dhx9O70133 1380 aaKnown RBP15.61■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Myt1Q8CFC2 1127 aa15.61■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Adamtsl3G3UXC7 1706 aa15.61■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Myom3A2ABU4 1439 aa15.6■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Afap1Q80YS6 731 aa15.59■□□□□ 0.09
Ddx56-201ENSMUST00000004507 Nsd2Q8BVE8 1365 aa15.58■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Ylpm1Q9R0I7 1386 aaKnown RBP15.57■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Mug2P28666 1451 aa15.57■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Atp7aQ64430 1491 aa15.57■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Dapk1Q80YE7 1442 aa15.57■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Calr4Q3TQS0 420 aa15.56■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Cwc22Q8C5N3 908 aaKnown RBP15.56■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Tmem131lQ3U3D7 1597 aa15.55■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Mrs2Q5NCE8 434 aa15.55■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Slc24a1Q91WD8 1130 aa15.55■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Plekhg5Q66T02 1073 aa15.55■□□□□ 0.08
Ddx56-201ENSMUST00000004507 CltcQ68FD5 1675 aaKnown RBP15.54■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Ttc21bQ0HA38 1315 aa15.54■□□□□ 0.08
Ddx56-201ENSMUST00000004507 AnkarA2RT91 1465 aa15.54■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Rgl3Q3UYI5 709 aa15.53■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Anp32aO35381 247 aa15.53■□□□□ 0.08
Ddx56-201ENSMUST00000004507 Alpk3Q924C5 1678 aa15.52■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Erich6D3Z6S9 713 aa15.51■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Slc4a2P13808 1237 aaKnown RBP15.51■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Safb2Q80YR5 991 aaKnown RBP15.51■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Rsph4aQ8BYM7 716 aa15.5■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Exoc6Q8R313 802 aa15.5■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Adamts7Q68SA9 1657 aa15.5■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Iqgap1Q9JKF1 1657 aaKnown RBP15.5■□□□□ 0.07
Ddx56-201ENSMUST00000004507 RalgapbQ8BQZ4 1484 aa15.5■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Dot1lQ6XZL8 1540 aa15.5■□□□□ 0.07
Ddx56-201ENSMUST00000004507 RictorQ6QI06 1708 aa15.49■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Tarbp1E9Q368 1579 aa15.49■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Rundc1Q0VDN7 615 aa15.49■□□□□ 0.07
Ddx56-201ENSMUST00000004507 NrdcQ8BHG1 1161 aa15.49■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Cpsf1Q9EPU4 1441 aaKnown RBP15.49■□□□□ 0.07
Ddx56-201ENSMUST00000004507 Cdk13Q69ZA1 1511 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms