RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Dnai1Q8C0M8 701 aa12.25□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Mbd3Q9Z2D8 285 aaKnown RBP12.25□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Rprd2Q6NXI6 1469 aaKnown RBP12.24□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Golga2Q921M4 999 aa12.24□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Rock1P70335 1354 aa12.24□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Pknox2Q8BG99 474 aa12.24□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Thoc2B1AZI6 1594 aaKnown RBP12.24□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Liat1Q810M6 228 aa12.23□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Samd9lQ69Z37 1561 aa12.23□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Exosc9Q9JHI7 438 aaKnown RBP12.23□□□□□ -0.45
Col6a1-201ENSMUST00000001147 BC005561E9Q5E2 1589 aa12.23□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Il16O54824 1322 aa12.22□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Spag9Q58A65 1321 aaKnown RBP12.22□□□□□ -0.45
Col6a1-201ENSMUST00000001147 IqubQ8CDK3 788 aa12.22□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Ttll13A4Q9F6 804 aa12.21□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Myom3A2ABU4 1439 aa12.21□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Fam184bQ0KK56 942 aa12.21□□□□□ -0.45
Col6a1-201ENSMUST00000001147 Crocc2F6XLV1 1638 aa12.21□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Ncoa3O09000 1398 aa12.21□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Vsig10D3YX43 558 aa12.21□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Grin2aP35436 1464 aa12.2□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Prkrip1Q9CWV6 186 aaKnown RBP12.2□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Cluap1Q8R3P7 413 aa12.19□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Stk26Q99JT2 416 aa12.19□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Kif7B7ZNG0 1348 aa12.19□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Camsap2Q8C1B1 1461 aa12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Gm6268A2A3U9 297 aa12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Sart3Q9JLI8 962 aaKnown RBP12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Lmo7E9PYF4 1699 aaKnown RBP12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Rfx7F8VPJ6 1459 aa12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Pde4cQ3UEI1 686 aa12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 U2af1Q9D883 239 aaKnown RBP12.18□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Senp3Q9EP97 568 aaKnown RBP12.17□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Cd109Q8R422 1442 aa12.17□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Fam163aQ8CAA5 168 aa12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Mrc2Q64449 1479 aa12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 DekQ7TNV0 380 aaKnown RBP12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Usp40Q8BWR4 1235 aa12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Kif16bB1AVY7 1312 aa12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Znf330Q922H9 316 aa12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Map3k5O35099 1380 aa12.16□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Mapk8ip3Q9ESN9 1337 aa12.15□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Soga1E1U8D0 1418 aa12.15□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Pla2r1Q62028 1487 aa12.15□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Pik3c2gO70167 1506 aa12.15□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Ppp2r1aQ76MZ3 589 aa12.15□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Ipo8Q7TMY7 1010 aa12.15□□□□□ -0.46
Col6a1-201ENSMUST00000001147 Ksr2Q3UVC0 959 aa12.14□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Ccdc30Q8BVF4 654 aa12.14□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Lemd3Q9WU40 921 aa12.14□□□□□ -0.47
Col6a1-201ENSMUST00000001147 PxdnQ3UQ28 1475 aa12.14□□□□□ -0.47
Col6a1-201ENSMUST00000001147 NudcO35685 332 aaKnown RBP12.13□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Eif2s2Q99L45 331 aaKnown RBP12.13□□□□□ -0.47
Col6a1-201ENSMUST00000001147 PrxO55103 1391 aa12.13□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Htatsf1Q8BGC0 757 aa12.12□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Pank1Q8K4K6 548 aa12.12□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Plcb2A3KGF7 1181 aa12.11□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Peg3Q3URU2 1571 aa12.11□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Ak7Q9D2H2 614 aa12.1□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Arhgef40Q3UPH7 1517 aa12.1□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Dnajc5bQ9CQ94 199 aa12.1□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Lmtk2Q3TYD6 1471 aa12.1□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Magi1Q6RHR9 1471 aa12.1□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Adgrb2Q8CGM1 1561 aa12.1□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Plin1Q8CGN5 517 aa12.09□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Iqcf3Q9D498 203 aa12.09□□□□□ -0.47
Col6a1-201ENSMUST00000001147 WizO88286 1684 aaKnown RBP12.09□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Ccdc141E9Q8Q6 1531 aa12.09□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Tmco5bQ80X59 307 aa12.09□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Egfem1Q8C088 590 aa12.09□□□□□ -0.47
Col6a1-201ENSMUST00000001147 Arhgap5P97393 1501 aa12.08□□□□□ -0.48
Col6a1-201ENSMUST00000001147 1700019A02RikA0A087WPV9 146 aa12.08□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Mfap1aC0HKD8 439 aaKnown RBP12.08□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Mfap1bC0HKD9 439 aaKnown RBP12.08□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Sall3Q62255 1320 aa12.08□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Tsen2Q6P7W5 460 aa12.07□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Plcd4Q8K3R3 807 aa12.07□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Disp1Q3TDN0 1521 aa12.06□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Ythdc1E9Q5K9 736 aaKnown RBP12.06□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Fgd1P52734 960 aa12.06□□□□□ -0.48
Col6a1-201ENSMUST00000001147 GsdmaQ9EST1 446 aa12.05□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Mug2P28666 1451 aa12.05□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Polr3aB2RXC6 1390 aa12.05□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Rab3gap2Q8BMG7 1366 aa12.04□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Plekhh1Q80TI1 1356 aa12.04□□□□□ -0.48
Col6a1-201ENSMUST00000001147 AU015836B2RUM3 263 aa12.04□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Ralbp1Q62172 648 aa12.04□□□□□ -0.48
Col6a1-201ENSMUST00000001147 KarsQ99MN1 595 aaKnown RBP12.04□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Kank1E9Q238 1360 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Dennd4bQ3U1Y4 1499 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Wdr7Q920I9 1489 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Tspyl2Q7TQI8 677 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Irx6Q9ER75 438 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Neo1P97798 1493 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Asxl1P59598 1514 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Birc3O08863 600 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Znf316Q6PGE4 1016 aa12.03□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Map7O88735 730 aa12.02□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Magi3Q9EQJ9 1476 aa12.02□□□□□ -0.48
Col6a1-201ENSMUST00000001147 Prdm16A2A935 1275 aa12.02□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms