RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EAR1YMR171C GSH2Q08220 491 aa4.31□□□□□ -1.72
EAR1YMR171C SAM4Q08985 325 aaKnown RBP4.31□□□□□ -1.72
EAR1YMR171C BBP1Q12365 385 aa4.31□□□□□ -1.72
EAR1YMR171C FUM1P08417 488 aaKnown RBP4.3□□□□□ -1.72
EAR1YMR171C UNG1P12887 359 aa4.3□□□□□ -1.72
EAR1YMR171C MRP20P32387 263 aa4.3□□□□□ -1.72
EAR1YMR171C HOT13P36078 116 aa4.3□□□□□ -1.72
EAR1YMR171C UBA4P38820 440 aa4.3□□□□□ -1.72
EAR1YMR171C TVP23P38962 199 aa4.3□□□□□ -1.72
EAR1YMR171C FMP10P40098 244 aa4.3□□□□□ -1.72
EAR1YMR171C SER2P42941 309 aa4.3□□□□□ -1.72
EAR1YMR171C GOR1P53839 350 aa4.3□□□□□ -1.72
EAR1YMR171C YNL140CP53910 189 aa4.3□□□□□ -1.72
EAR1YMR171C MET31Q03081 177 aa4.3□□□□□ -1.72
EAR1YMR171C MAK3Q03503 176 aa4.3□□□□□ -1.72
EAR1YMR171C YMD8Q03697 442 aa4.3□□□□□ -1.72
EAR1YMR171C YML108WQ03759 105 aa4.3□□□□□ -1.72
EAR1YMR171C RNH1Q04740 348 aa4.3□□□□□ -1.72
EAR1YMR171C RRT8Q08219 342 aa4.3□□□□□ -1.72
EAR1YMR171C RDL1Q12305 139 aaKnown RBP4.3□□□□□ -1.72
EAR1YMR171C ERG27Q12452 347 aaKnown RBP4.3□□□□□ -1.72
EAR1YMR171C STF2P16965 84 aa4.29□□□□□ -1.72
EAR1YMR171C CHA1P25379 360 aaKnown RBP4.29□□□□□ -1.72
EAR1YMR171C ASF2P32448 525 aaPredicted RBP4.29□□□□□ -1.72
EAR1YMR171C GSH1P32477 678 aa4.29□□□□□ -1.72
EAR1YMR171C SEC17P32602 292 aa4.29□□□□□ -1.72
EAR1YMR171C PRP18P33411 251 aaPredicted RBP4.29□□□□□ -1.72
EAR1YMR171C CLG1P35190 452 aa4.29□□□□□ -1.72
EAR1YMR171C YKL063CP35725 167 aa4.29□□□□□ -1.72
EAR1YMR171C PAN6P40459 309 aa4.29□□□□□ -1.72
EAR1YMR171C AIM22P47051 409 aa4.29□□□□□ -1.72
EAR1YMR171C TIS11P47977 285 aa4.29□□□□□ -1.72
EAR1YMR171C DIE2P50076 525 aa4.29□□□□□ -1.72
EAR1YMR171C YGR168CP53293 376 aa4.29□□□□□ -1.72
EAR1YMR171C YNR061CP53747 219 aa4.29□□□□□ -1.72
EAR1YMR171C GRX5Q02784 150 aa4.29□□□□□ -1.72
EAR1YMR171C BUD7Q08754 746 aa4.29□□□□□ -1.72
EAR1YMR171C RRP42Q12277 265 aaPredicted RBP4.29□□□□□ -1.72
EAR1YMR171C YOR012WQ12351 137 aa4.29□□□□□ -1.72
EAR1YMR171C GTT2Q12390 233 aa4.29□□□□□ -1.72
EAR1YMR171C HTZ1Q12692 134 aaKnown RBP4.29□□□□□ -1.72
EAR1YMR171C SRN2Q99176 213 aa4.29□□□□□ -1.72
EAR1YMR171C PDE2P06776 526 aa4.29□□□□□ -1.72
EAR1YMR171C MAS1P10507 462 aa4.29□□□□□ -1.72
EAR1YMR171C MDH1P17505 334 aaKnown RBP RIP-Chip data4.29□□□□□ -1.72not detected
EAR1YMR171C MAK32P23060 363 aa4.29□□□□□ -1.72
EAR1YMR171C PPH22P23595 377 aa4.29□□□□□ -1.72
EAR1YMR171C SPT14P32363 452 aa4.29□□□□□ -1.72
EAR1YMR171C SDH3P33421 198 aa4.29□□□□□ -1.72
EAR1YMR171C YPT52P36018 234 aaKnown RBP4.29□□□□□ -1.72
EAR1YMR171C UTP30P36144 274 aaKnown RBP4.29□□□□□ -1.72
EAR1YMR171C SIF2P38262 535 aa4.29□□□□□ -1.72
EAR1YMR171C APD1P38281 316 aa4.29□□□□□ -1.72
EAR1YMR171C YHK8P38776 514 aa4.29□□□□□ -1.72
EAR1YMR171C AFG3P39925 761 aa4.29□□□□□ -1.72
EAR1YMR171C YEL068CP39977 110 aa4.29□□□□□ -1.72
EAR1YMR171C BTT1P40314 149 aaPredicted RBP4.29□□□□□ -1.72
EAR1YMR171C MPM1P40364 252 aa4.29□□□□□ -1.72
EAR1YMR171C FET5P43561 622 aa4.29□□□□□ -1.72
EAR1YMR171C BIO3P50277 480 aa4.29□□□□□ -1.72
EAR1YMR171C IMP4P53941 290 aaKnown RBP4.29□□□□□ -1.72
EAR1YMR171C HER2Q03557 464 aa4.29□□□□□ -1.72
EAR1YMR171C SYO1Q07395 620 aa4.29□□□□□ -1.72
EAR1YMR171C YOL131WQ08270 108 aa4.29□□□□□ -1.72
EAR1YMR171C LYS21Q12122 440 aaKnown RBP4.29□□□□□ -1.72
EAR1YMR171C YLR126CQ12288 251 aa4.29□□□□□ -1.72
EAR1YMR171C PEX11Q12462 236 aa4.29□□□□□ -1.72
EAR1YMR171C YLR422WQ06409 1932 aa4.29□□□□□ -1.72
EAR1YMR171C CDC21P06785 304 aa4.28□□□□□ -1.72
EAR1YMR171C YAR066WP0CX18 203 aa4.28□□□□□ -1.72
EAR1YMR171C YHR214WP0CX19 203 aa4.28□□□□□ -1.72
EAR1YMR171C SAR1P20606 190 aaKnown RBP4.28□□□□□ -1.72
EAR1YMR171C DAL81P21657 970 aa4.28□□□□□ -1.72
EAR1YMR171C SGV1P23293 657 aaKnown RBP4.28□□□□□ -1.72
EAR1YMR171C ARO7P32178 256 aa4.28□□□□□ -1.72
EAR1YMR171C SRB5P32585 307 aa4.28□□□□□ -1.72
EAR1YMR171C IMD2P38697 523 aaKnown RBP4.28□□□□□ -1.72
EAR1YMR171C PCL6P40038 420 aa4.28□□□□□ -1.72
EAR1YMR171C SER3P40054 469 aa4.28□□□□□ -1.72
EAR1YMR171C BUR6P40096 142 aa4.28□□□□□ -1.72
EAR1YMR171C PMT4P46971 762 aa4.28□□□□□ -1.72
EAR1YMR171C YNL181WP53878 407 aa4.28□□□□□ -1.72
EAR1YMR171C VAC7P53950 1165 aa4.28□□□□□ -1.72
EAR1YMR171C MPS1P54199 764 aa4.28□□□□□ -1.72
EAR1YMR171C YPR114WQ06107 315 aa4.28□□□□□ -1.72
EAR1YMR171C VPS74Q06385 345 aa4.28□□□□□ -1.72
EAR1YMR171C YPL245WQ12179 454 aaKnown RBP4.28□□□□□ -1.72
EAR1YMR171C NFI1Q12216 726 aa4.28□□□□□ -1.72
EAR1YMR171C SFM1Q12314 213 aa4.28□□□□□ -1.72
EAR1YMR171C SUS1Q6WNK7 96 aa4.28□□□□□ -1.72
EAR1YMR171C LAG2Q92325 660 aa4.28□□□□□ -1.72
EAR1YMR171C YOR019WQ99248 730 aa4.28□□□□□ -1.72
EAR1YMR171C STE3P06783 470 aa4.27□□□□□ -1.73
EAR1YMR171C SEN2P16658 377 aa4.27□□□□□ -1.73
EAR1YMR171C DBP3P20447 523 aaKnown RBP4.27□□□□□ -1.73
EAR1YMR171C BUD5P25300 642 aaPredicted RBP4.27□□□□□ -1.73
EAR1YMR171C RRP7P25368 297 aaPredicted RBP4.27□□□□□ -1.73
EAR1YMR171C ADK2P26364 225 aa4.27□□□□□ -1.73
EAR1YMR171C PIM1P36775 1133 aa4.27□□□□□ -1.73
EAR1YMR171C ARA1P38115 344 aa4.27□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 171.6 ms