RNA–Protein interactions for RNA: YLR181C

VTA1, Transcript of Multivesicular body (MVB) protein, yeast

Gene VTA1, Length 993 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTA1	YLR181C	SHY1	P53266	389 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	RET3	P53600	189 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	YNL143C	P53908	130 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	YPR078C	Q06813	372 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	YDL114W	Q07530	308 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	SFG1	Q12507	346 aa		4.2	□□□□□ -1.74
VTA1	YLR181C	MRPL8	P22353	238 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	AAT2	P23542	418 aa	Known RBP	4.19	□□□□□ -1.74
VTA1	YLR181C	DBR1	P24309	405 aa	Known RBP	4.19	□□□□□ -1.74
VTA1	YLR181C	NUP2	P32499	720 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	OXA1	P39952	402 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	YNL208W	P40159	199 aa	Known RBP	4.19	□□□□□ -1.74
VTA1	YLR181C	ATG18	P43601	500 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	AQR1	P53943	586 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	YDR286C	Q05530	114 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	MFG1	Q07684	458 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	NBL1	Q3E7Y6	73 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	RAD50	P12753	1312 aa		4.19	□□□□□ -1.74
VTA1	YLR181C	FUN26	P31381	517 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	SPR1	P32603	445 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	SPO23	P33757	523 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	SEC9	P40357	651 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	CUE3	P53137	624 aa	Known RBP	4.18	□□□□□ -1.74
VTA1	YLR181C	GAT3	Q07928	141 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	PML1	Q07930	204 aa	Predicted RBP	4.18	□□□□□ -1.74
VTA1	YLR181C	NAG1	Q8TGN9	163 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	YOR338W	Q99326	363 aa		4.18	□□□□□ -1.74
VTA1	YLR181C	EFB1	P32471	206 aa	Known RBP	4.17	□□□□□ -1.74
VTA1	YLR181C	SMI1	P32566	505 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	PTK1	P36002	662 aa	Predicted RBP	4.17	□□□□□ -1.74
VTA1	YLR181C	ANR2	P36090	516 aa	Predicted RBP	4.17	□□□□□ -1.74
VTA1	YLR181C	BAT1	P38891	393 aa	Known RBP	4.17	□□□□□ -1.74
VTA1	YLR181C	TIS11	P47977	285 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	YLR152C	P54072	576 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	AIM33	Q04516	312 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	LIP2	Q06005	328 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	NKP2	Q06162	153 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	SHS1	Q07657	551 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	YOR012W	Q12351	137 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	YDL199C	Q12407	687 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	FSH3	Q99369	266 aa		4.17	□□□□□ -1.74
VTA1	YLR181C	STE3	P06783	470 aa		4.16	□□□□□ -1.74
VTA1	YLR181C	THR4	P16120	514 aa	Known RBP	4.16	□□□□□ -1.74
VTA1	YLR181C	ATP22	P50273	684 aa	Predicted RBP	4.16	□□□□□ -1.74
VTA1	YLR181C	YGL039W	P53183	348 aa	Known RBP	4.16	□□□□□ -1.74
VTA1	YLR181C	YET2	Q04210	160 aa		4.16	□□□□□ -1.74
VTA1	YLR181C	PGC1	Q08959	321 aa		4.16	□□□□□ -1.74
VTA1	YLR181C	PSY3	Q12318	242 aa		4.16	□□□□□ -1.74
VTA1	YLR181C	NCB2	Q92317	146 aa		4.16	□□□□□ -1.74
VTA1	YLR181C	MAS1	P10507	462 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	MAS2	P11914	482 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	SSE1	P32589	693 aa	Known RBP	4.15	□□□□□ -1.75
VTA1	YLR181C	YEL043W	P32618	956 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	VAM7	P32912	316 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	UIP5	P36137	443 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	LCP5	P40079	357 aa	Predicted RBP	4.15	□□□□□ -1.75
VTA1	YLR181C	DFG10	P40526	253 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	EFM3	P47163	339 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	REX2	P54964	269 aa	Known RBP	4.15	□□□□□ -1.75
VTA1	YLR181C	YMR010W	Q03687	405 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	YMR310C	Q04867	317 aa	Predicted RBP	4.15	□□□□□ -1.75
VTA1	YLR181C	PDR18	P53756	1333 aa		4.15	□□□□□ -1.75
VTA1	YLR181C	TPM1	P17536	199 aa	Known RBP	4.14	□□□□□ -1.75
VTA1	YLR181C	YER186C	P40101	306 aa		4.14	□□□□□ -1.75
VTA1	YLR181C	TRF5	P48561	642 aa	Known RBP	4.14	□□□□□ -1.75
VTA1	YLR181C	PRM1	P53835	661 aa		4.14	□□□□□ -1.75
VTA1	YLR181C	PDR16	P53860	351 aa	Known RBP	4.14	□□□□□ -1.75
VTA1	YLR181C	SKI8	Q02793	397 aa	Predicted RBP	4.14	□□□□□ -1.75
VTA1	YLR181C	ADD37	Q03233	198 aa		4.14	□□□□□ -1.75
VTA1	YLR181C	GLE1	Q12315	538 aa		4.14	□□□□□ -1.75
VTA1	YLR181C	AIM45	Q12480	344 aa	Known RBP	4.14	□□□□□ -1.75
VTA1	YLR181C	SSK22	P25390	1331 aa	Predicted RBP	4.14	□□□□□ -1.75
VTA1	YLR181C	SAC3	P46674	1301 aa		4.14	□□□□□ -1.75
VTA1	YLR181C	RPS16A	P0CX51	143 aa	Known RBP	4.13	□□□□□ -1.75
VTA1	YLR181C	RPS16B	P0CX52	143 aa	Known RBP	4.13	□□□□□ -1.75
VTA1	YLR181C	TAL1	P15019	335 aa	Known RBP	4.13	□□□□□ -1.75
VTA1	YLR181C	SAG1	P20840	650 aa		4.13	□□□□□ -1.75
VTA1	YLR181C	HMX1	P32339	317 aa		4.13	□□□□□ -1.75
VTA1	YLR181C	YIL089W	P40500	205 aa		4.13	□□□□□ -1.75
VTA1	YLR181C	AIP1	P46680	615 aa	Known RBP	4.13	□□□□□ -1.75
VTA1	YLR181C	CTK3	P46963	296 aa	Predicted RBP	4.13	□□□□□ -1.75
VTA1	YLR181C	SMP3	Q04174	516 aa		4.13	□□□□□ -1.75
VTA1	YLR181C	YLH47	Q06493	454 aa		4.13	□□□□□ -1.75
VTA1	YLR181C	RPS18A	P0CX55	146 aa	Known RBP	4.12	□□□□□ -1.75
VTA1	YLR181C	RPS18B	P0CX56	146 aa	Predicted RBP	4.12	□□□□□ -1.75
VTA1	YLR181C	GRR1	P24814	1151 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	PCL1	P24867	279 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	CHA1	P25379	360 aa	Known RBP	4.12	□□□□□ -1.75
VTA1	YLR181C	CDC50	P25656	391 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	ANP1	P32629	500 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	OPY1	P38271	328 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	CIN2	P46670	268 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	YHC1	Q05900	231 aa	Known RBP	4.12	□□□□□ -1.75
VTA1	YLR181C	HMS1	Q12398	434 aa		4.12	□□□□□ -1.75
VTA1	YLR181C	FIG2	P25653	1609 aa		4.11	□□□□□ -1.75
VTA1	YLR181C	RPL16A	P26784	199 aa	Known RBP	4.11	□□□□□ -1.75
VTA1	YLR181C	OM14	P38325	134 aa		4.11	□□□□□ -1.75
VTA1	YLR181C	LSM12	P38828	187 aa	Known RBP	4.11	□□□□□ -1.75
VTA1	YLR181C	YHR182W	P38870	785 aa		4.11	□□□□□ -1.75
VTA1	YLR181C	NAS2	P40555	220 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms