RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	PXR1	P53335	271 aa	Predicted RBP	4.6	□□□□□ -1.67
SIS2	YKR072C	OST6	Q03723	332 aa		4.6	□□□□□ -1.67
SIS2	YKR072C	TMN2	Q04562	672 aa		4.6	□□□□□ -1.67
SIS2	YKR072C	FAR8	Q05040	523 aa		4.6	□□□□□ -1.67
SIS2	YKR072C	ATG17	Q06410	417 aa		4.6	□□□□□ -1.67
SIS2	YKR072C	YDL144C	Q07589	356 aa		4.6	□□□□□ -1.67
SIS2	YKR072C	FBA1	P14540	359 aa	Known RBP	4.59	□□□□□ -1.67
SIS2	YKR072C	KIN3	P22209	435 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	SPS19	P32573	292 aa	Known RBP	4.59	□□□□□ -1.67
SIS2	YKR072C	IES6	P32617	166 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	UTR4	P32626	227 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	YGR210C	P42942	411 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	CWC23	P52868	283 aa	Predicted RBP	4.59	□□□□□ -1.67
SIS2	YKR072C	GPI1	P53306	609 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	ASI1	P54074	624 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	YPL014W	Q02606	381 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	GPM2	Q12008	311 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	SNF8	Q12483	233 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	YKL183C-A	Q3E765	70 aa		4.59	□□□□□ -1.67
SIS2	YKR072C	ATP6	P00854	259 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	HTB1	P02293	131 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	HTB2	P02294	131 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	RPL7A	P05737	244 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	ALG7	P07286	448 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	POX1	P13711	748 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	YMR31	P19955	123 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	RBK1	P25332	333 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	SAT4	P25333	603 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	PDR3	P33200	976 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	VPS21	P36017	210 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	RIM2	P38127	377 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	CBR1	P38626	284 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	YNL194C	P40169	301 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	SLM1	P40485	686 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	TMA22	P47089	198 aa	Predicted RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	IBA57	P47158	497 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	SLX9	P53251	210 aa	Predicted RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	ZRG17	P53735	605 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	EAF7	P53911	425 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	SMX3	P54999	86 aa	Predicted RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	RHO4	Q00246	291 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	YPL034W	Q03083	165 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	EBS1	Q03466	884 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	HER2	Q03557	464 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	TMA10	Q06177	86 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	MCH4	Q08268	501 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	SKI7	Q08491	747 aa	Predicted RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	RPL7B	Q12213	244 aa	Known RBP	4.58	□□□□□ -1.68
SIS2	YKR072C	SPP41	P38904	1435 aa		4.58	□□□□□ -1.68
SIS2	YKR072C	PPZ1	P26570	692 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
SIS2	YKR072C	SNC1	P31109	117 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	TOA2	P32774	122 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	YPT52	P36018	234 aa	Known RBP	4.57	□□□□□ -1.68
SIS2	YKR072C	IST2	P38250	946 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	COX15	P40086	486 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	DDI1	P40087	428 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	TOS2	P50078	622 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	YGL159W	P53110	370 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	NOP19	P53317	196 aa	Predicted RBP	4.57	□□□□□ -1.68
SIS2	YKR072C	MTQ1	P53944	314 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	YPL080C	Q02826	108 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	YOR387C	Q08910	206 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	APC9	Q12107	265 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	DOP1	Q03921	1698 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	VTH1	P40438	1549 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	VTH2	P40890	1549 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	RPS13	P05756	151 aa	Known RBP	4.57	□□□□□ -1.68
SIS2	YKR072C	RPB8	P20436	146 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	FAR1	P21268	830 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	DCC1	P25559	380 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	ITR2	P30606	609 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	PPZ2	P33329	710 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	YMC2	P38087	329 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	ATG7	P38862	630 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	LYS1	P38998	373 aa	RIP-Chip data	4.57	□□□□□ -1.68	not detected
SIS2	YKR072C	FAA2	P39518	744 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	ERV46	P39727	415 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	RBG1	P39729	369 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	MIT1	P40002	666 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	RTT101	P47050	842 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	TAD2	P47058	250 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	PHB2	P50085	310 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	ORC5	P50874	479 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	MIG2	P53035	382 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	LST7	P53237	242 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	CAC2	Q04199	468 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	SSK1	Q07084	712 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	SNA4	Q07549	140 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	SET6	Q12529	373 aa		4.57	□□□□□ -1.68
SIS2	YKR072C	SMC4	Q12267	1418 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	ILV1	P00927	576 aa	Known RBP	4.56	□□□□□ -1.68
SIS2	YKR072C	BUB3	P26449	341 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	ZRT1	P32804	376 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	YKL097C	P34245	136 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	TAF14	P35189	244 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	MRX3	P38172	270 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	CCT4	P39078	528 aa	Known RBP	4.56	□□□□□ -1.68
SIS2	YKR072C	IDP2	P41939	412 aa		4.56	□□□□□ -1.68
SIS2	YKR072C	SOL4	P53315	255 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms