RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	MXR2	P25566	168 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	NAM9	P27929	486 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	MEI5	P32489	222 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	COT1	P32798	439 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	MRPS5	P33759	307 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	TIR2	P33890	251 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	MYO3	P36006	1272 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	TPO5	P36029	618 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	MAK5	P38112	773 aa	Predicted RBP	3.04	□□□□□ -1.92
SWD2	YKL018W	TCD1	P38756	429 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	YHK8	P38776	514 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	MTW1	P39731	289 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	YMR134W	P40207	237 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	PRM5	P40476	318 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	YIL067C	P40514	678 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	SDT1	P53078	280 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	PNC1	P53184	216 aa	Known RBP	3.04	□□□□□ -1.92
SWD2	YKL018W	DBP6	P53734	629 aa	Known RBP	3.04	□□□□□ -1.92
SWD2	YKL018W	NUP116	Q02630	1113 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	MRPS17	Q03246	237 aa	Predicted RBP	3.04	□□□□□ -1.92
SWD2	YKL018W	NAT4	Q04751	285 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	BOP2	Q06150	570 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	LOT6	Q07923	191 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	ESA1	Q08649	445 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	EAF3	Q12432	401 aa		3.04	□□□□□ -1.92
SWD2	YKL018W	HTZ1	Q12692	134 aa	Known RBP	3.04	□□□□□ -1.92
SWD2	YKL018W	MEX67	Q99257	599 aa	Known RBP	3.04	□□□□□ -1.92
SWD2	YKL018W	YCF1	P39109	1515 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	LTE1	P07866	1435 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	SKI3	P17883	1432 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	JIP3	O13555	125 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	PIS1	P06197	220 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	RPL18A	P0CX49	186 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	RPL18B	P0CX50	186 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	NAM2	P11325	894 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	SAR1	P20606	190 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	PHA2	P32452	334 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	ZUO1	P32527	433 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	RAD5	P32849	1169 aa	Predicted RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	SBE22	P38814	852 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	BTT1	P40314	149 aa	Predicted RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	YRB2	P40517	327 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	YGR210C	P42942	411 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	LCB3	P47013	409 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	YJR030C	P47101	745 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	ABM1	P47146	123 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	RIB4	P50861	169 aa	Predicted RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	MRM2	P53123	320 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	YGR067C	P53243	804 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	YGR168C	P53293	376 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	MPP6	P53725	186 aa	Predicted RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	ELP3	Q02908	557 aa	Known RBP	3.03	□□□□□ -1.92
SWD2	YKL018W	HER2	Q03557	464 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	PRM6	Q04705	352 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	RRG8	Q06109	277 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	BCP1	Q06338	283 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	GAT3	Q07928	141 aa		3.03	□□□□□ -1.92
SWD2	YKL018W	STE2	D6VTK4	431 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	FUS3	P16892	353 aa	Known RBP	3.02	□□□□□ -1.93
SWD2	YKL018W	UGA1	P17649	471 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	YPK2	P18961	677 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	ARF2	P19146	181 aa	Known RBP	3.02	□□□□□ -1.93
SWD2	YKL018W	DAL81	P21657	970 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	SUA5	P32579	426 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	MRPL37	P36532	105 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	ECM8	P38246	354 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	ATG7	P38862	630 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	RBG1	P39729	369 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	MAM33	P40513	266 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	HSH155	P49955	971 aa	Known RBP	3.02	□□□□□ -1.93
SWD2	YKL018W	LST7	P53237	242 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	MNT4	P53745	580 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	COS1	P53822	381 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	YMR010W	Q03687	405 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	CSI1	Q04368	295 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	VAC14	Q06708	880 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	SMC5	Q08204	1093 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	YPR1	Q12458	312 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	PCL9	Q12477	304 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	DCP1	Q12517	231 aa	Predicted RBP	3.02	□□□□□ -1.93
SWD2	YKL018W	CMC2	Q3E7A4	109 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	MET5	P47169	1442 aa		3.02	□□□□□ -1.93
SWD2	YKL018W	CDC36	P06100	191 aa	Predicted RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	CYC3	P06182	269 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	PET494	P07390	489 aa	Predicted RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	FAR1	P21268	830 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	UTR1	P21373	530 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	SDH3	P33421	198 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	YMR262W	P38430	313 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	SMF2	P38778	549 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	YPT35	P38815	214 aa	Known RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	RTR1	P40084	226 aa	Predicted RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	UTP25	P40498	721 aa	Known RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	MSS2	P40990	351 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	KEG1	P43614	200 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	GCD14	P46959	383 aa	Predicted RBP	3.01	□□□□□ -1.93
SWD2	YKL018W	LOH1	P47055	219 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	AIM24	P47127	394 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	PGA2	P53903	129 aa		3.01	□□□□□ -1.93
SWD2	YKL018W	MTQ1	P53944	314 aa		3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms