RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	PRS2	P38620	318 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	SBE22	P38814	852 aa		1.09	□□□□□ -2.24
APL1	YJR005W	VAB2	P40003	282 aa		1.09	□□□□□ -2.24
APL1	YJR005W	SER3	P40054	469 aa		1.09	□□□□□ -2.24
APL1	YJR005W	DPH1	P40487	425 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	MET28	P40573	187 aa		1.09	□□□□□ -2.24
APL1	YJR005W	PAC11	P40960	533 aa		1.09	□□□□□ -2.24
APL1	YJR005W	CDC40	P40968	455 aa	Predicted RBP	1.09	□□□□□ -2.24
APL1	YJR005W	GAB1	P41733	394 aa		1.09	□□□□□ -2.24
APL1	YJR005W	VMA13	P41807	478 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	YFH7	P43591	353 aa		1.09	□□□□□ -2.24
APL1	YJR005W	ALK1	P43633	760 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	YAR1	P46683	200 aa		1.09	□□□□□ -2.24
APL1	YJR005W	GWT1	P47026	490 aa		1.09	□□□□□ -2.24
APL1	YJR005W	YJL016W	P47072	561 aa		1.09	□□□□□ -2.24
APL1	YJR005W	YJR111C	P47148	283 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	APT1	P49435	187 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	RPL4B	P49626	362 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	NAS6	P50086	228 aa		1.09	□□□□□ -2.24
APL1	YJR005W	ALT2	P52892	507 aa		1.09	□□□□□ -2.24
APL1	YJR005W	NSA1	P53136	463 aa	Predicted RBP	1.09	□□□□□ -2.24
APL1	YJR005W	YGR066C	P53242	292 aa		1.09	□□□□□ -2.24
APL1	YJR005W	VOA1	P53262	265 aa		1.09	□□□□□ -2.24
APL1	YJR005W	YGR126W	P53274	230 aa		1.09	□□□□□ -2.24
APL1	YJR005W	CUS2	P53830	285 aa	Predicted RBP	1.09	□□□□□ -2.24
APL1	YJR005W	ARK1	P53974	638 aa		1.09	□□□□□ -2.24
APL1	YJR005W	DID2	P69771	204 aa		1.09	□□□□□ -2.24
APL1	YJR005W	TMA20	P89886	181 aa	Predicted RBP	1.09	□□□□□ -2.24
APL1	YJR005W	CTF19	Q02732	369 aa		1.09	□□□□□ -2.24
APL1	YJR005W	CWC27	Q02770	301 aa		1.09	□□□□□ -2.24
APL1	YJR005W	VHS1	Q03785	461 aa		1.09	□□□□□ -2.24
APL1	YJR005W	YDR248C	Q03786	193 aa		1.09	□□□□□ -2.24
APL1	YJR005W	CSN9	Q03981	162 aa		1.09	□□□□□ -2.24
APL1	YJR005W	AIM32	Q04689	311 aa		1.09	□□□□□ -2.24
APL1	YJR005W	SOV1	Q04748	898 aa		1.09	□□□□□ -2.24
APL1	YJR005W	YLR283W	Q05867	314 aa		1.09	□□□□□ -2.24
APL1	YJR005W	STE23	Q06010	1027 aa		1.09	□□□□□ -2.24
APL1	YJR005W	SPH1	Q06160	661 aa		1.09	□□□□□ -2.24
APL1	YJR005W	YEH1	Q07804	573 aa		1.09	□□□□□ -2.24
APL1	YJR005W	PML1	Q07930	204 aa	Predicted RBP	1.09	□□□□□ -2.24
APL1	YJR005W	ZEO1	Q08245	113 aa		1.09	□□□□□ -2.24
APL1	YJR005W	SKI7	Q08491	747 aa	Predicted RBP	1.09	□□□□□ -2.24
APL1	YJR005W	TCO89	Q08921	799 aa		1.09	□□□□□ -2.24
APL1	YJR005W	DCN1	Q12395	269 aa		1.09	□□□□□ -2.24
APL1	YJR005W	PAA1	Q12447	191 aa	Known RBP	1.09	□□□□□ -2.24
APL1	YJR005W	OCA6	Q12454	224 aa		1.09	□□□□□ -2.24
APL1	YJR005W	SPE4	Q12455	300 aa		1.09	□□□□□ -2.24
APL1	YJR005W	AI5_BETA	Q9ZZX0	354 aa		1.09	□□□□□ -2.24
APL1	YJR005W	SPP41	P38904	1435 aa		1.08	□□□□□ -2.24
APL1	YJR005W	MMS22	Q06164	1454 aa		1.08	□□□□□ -2.24
APL1	YJR005W	HAP1	P0CE41	1502 aa		1.08	□□□□□ -2.24
APL1	YJR005W	ADH2	P00331	348 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	RPL25	P04456	142 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	MET17	P06106	444 aa		1.08	□□□□□ -2.24
APL1	YJR005W	GAL7	P08431	366 aa		1.08	□□□□□ -2.24
APL1	YJR005W	MRP13	P12686	339 aa		1.08	□□□□□ -2.24
APL1	YJR005W	SPT15	P13393	240 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	CBS1	P14066	229 aa		1.08	□□□□□ -2.24
APL1	YJR005W	SRV2	P17555	526 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	PET9	P18239	318 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	CMK2	P22517	447 aa		1.08	□□□□□ -2.24
APL1	YJR005W	DBR1	P24309	405 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	CPR4	P25334	318 aa		1.08	□□□□□ -2.24
APL1	YJR005W	SNT1	P25357	1226 aa		1.08	□□□□□ -2.24
APL1	YJR005W	DCC1	P25559	380 aa		1.08	□□□□□ -2.24
APL1	YJR005W	PEP3	P27801	918 aa		1.08	□□□□□ -2.24
APL1	YJR005W	PMT2	P31382	759 aa		1.08	□□□□□ -2.24
APL1	YJR005W	ECM25	P32525	599 aa		1.08	□□□□□ -2.24
APL1	YJR005W	SSE2	P32590	693 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	LHP1	P33399	275 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	RPS1A	P33442	255 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	SRP102	P36057	244 aa	Predicted RBP	1.08	□□□□□ -2.24
APL1	YJR005W	APE3	P37302	537 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	DUG2	P38149	878 aa		1.08	□□□□□ -2.24
APL1	YJR005W	FIG1	P38224	298 aa		1.08	□□□□□ -2.24
APL1	YJR005W	ICS2	P38284	255 aa		1.08	□□□□□ -2.24
APL1	YJR005W	AME1	P38313	324 aa		1.08	□□□□□ -2.24
APL1	YJR005W	RCK2	P38623	610 aa		1.08	□□□□□ -2.24
APL1	YJR005W	YHR210C	P38893	341 aa		1.08	□□□□□ -2.24
APL1	YJR005W	CCT6	P39079	546 aa		1.08	□□□□□ -2.24
APL1	YJR005W	AST2	P39945	430 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	AVT6	P40074	448 aa		1.08	□□□□□ -2.24
APL1	YJR005W	YER121W	P40076	114 aa		1.08	□□□□□ -2.24
APL1	YJR005W	MMF1	P40185	145 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	SOK1	P40317	901 aa		1.08	□□□□□ -2.24
APL1	YJR005W	DOT5	P40553	215 aa		1.08	□□□□□ -2.24
APL1	YJR005W	RPC17	P47076	161 aa		1.08	□□□□□ -2.24
APL1	YJR005W	YJR030C	P47101	745 aa		1.08	□□□□□ -2.24
APL1	YJR005W	AIM24	P47127	394 aa		1.08	□□□□□ -2.24
APL1	YJR005W	IBA57	P47158	497 aa		1.08	□□□□□ -2.24
APL1	YJR005W	CCC1	P47818	322 aa		1.08	□□□□□ -2.24
APL1	YJR005W	MRX6	P48564	524 aa		1.08	□□□□□ -2.24
APL1	YJR005W	AZR1	P50080	613 aa		1.08	□□□□□ -2.24
APL1	YJR005W	DUO1	P53168	247 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	COS6	P53344	381 aa		1.08	□□□□□ -2.24
APL1	YJR005W	RPT4	P53549	437 aa	Known RBP	1.08	□□□□□ -2.24
APL1	YJR005W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	1.08	□□□□□ -2.24	not detected
APL1	YJR005W	APJ1	P53940	528 aa		1.08	□□□□□ -2.24
APL1	YJR005W	YSA1	Q01976	231 aa		1.08	□□□□□ -2.24
APL1	YJR005W	IRC15	Q02733	499 aa		1.08	□□□□□ -2.24

Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms