RNA–Protein interactions for RNA: YGR194C

XKS1, Transcript of Xylulokinase, yeast

Gene XKS1, Length 1,803 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XKS1	YGR194C	YMR279C	Q03263	540 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	GAD1	Q04792	585 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	VID22	Q05934	901 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	AEP3	Q12089	606 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	LYS21	Q12122	440 aa	Known RBP	4.09	□□□□□ -1.75
XKS1	YGR194C	MED4	Q12343	284 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	LAA1	P39526	2014 aa		4.09	□□□□□ -1.75
XKS1	YGR194C	SIR2	P06700	562 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	TFS1	P14306	219 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	PHO80	P20052	293 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	YCR102C	P25608	368 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	CWH43	P25618	953 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	YBL010C	P32788	280 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	PDC2	P32896	925 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	WBP1	P33767	430 aa	Known RBP	4.09	□□□□□ -1.76
XKS1	YGR194C	SRY1	P36007	326 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	APL3	P38065	1025 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	LAG1	P38703	411 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	GEP4	P38812	185 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	NSG1	P38837	291 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	RCY1	P39531	840 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	PZF1	P39933	429 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	RFC4	P40339	323 aa	Known RBP	4.09	□□□□□ -1.76
XKS1	YGR194C	SWM2	P40342	146 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	BAP3	P41815	604 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	IRC7	P43623	340 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	NET1	P47035	1189 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	HSV2	P50079	448 aa	Predicted RBP	4.09	□□□□□ -1.76
XKS1	YGR194C	YGR117C	P53270	476 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	BUD17	P53727	317 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	INN1	P53901	409 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	GIP3	Q03016	1276 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	SPO77	Q06134	477 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	YLR446W	Q06204	433 aa		4.09	□□□□□ -1.76
XKS1	YGR194C	REP2	P03872	296 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	MSF1	P08425	469 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	RPS18A	P0CX55	146 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	RPS18B	P0CX56	146 aa	Predicted RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	FRS1	P15624	595 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	RRP7	P25368	297 aa	Predicted RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	RSA4	P25382	515 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	ECM25	P32525	599 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	SRB6	P32570	121 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	VPS17	P32913	551 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	TKL2	P33315	681 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	OAR1	P35731	278 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	ASC1	P38011	319 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	MOH1	P38191	138 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	FUI1	P38196	639 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	CDS1	P38221	457 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	BMT2	P38278	337 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	COS8	P38723	381 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	GID8	P40208	455 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	YIL077C	P40508	320 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	PKP1	P40530	394 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	IST3	P40565	148 aa	Predicted RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	PSA1	P41940	361 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	PFA3	P42836	336 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	LSM8	P47093	109 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	IMO32	P53219	342 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	SNX41	Q04053	625 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	CRR1	Q05790	422 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	YLR352W	Q06479	807 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	ZEO1	Q08245	113 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	SKI7	Q08491	747 aa	Predicted RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	MRX4	Q12467	430 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	RRP12	Q12754	1228 aa	Known RBP	4.08	□□□□□ -1.76
XKS1	YGR194C	YCL012C	Q8J0M4	134 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	YLR149C	Q99296	730 aa		4.08	□□□□□ -1.76
XKS1	YGR194C	CDC21	P06785	304 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	CIT2	P08679	460 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	CKS1	P20486	150 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	PPH22	P23595	377 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	NAM9	P27929	486 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
XKS1	YGR194C	VPH1	P32563	840 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	LHP1	P33399	275 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	TMA19	P35691	167 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	BIT61	P47041	543 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MOG1	P47123	218 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	AAD10	P47182	288 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	SRB7	P47822	140 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	HOS2	P53096	452 aa	Predicted RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	ROG1	P53118	685 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	PEF1	P53238	335 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YGR067C	P53243	804 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	VOA1	P53262	265 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	TPS1	Q00764	495 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	YDR541C	Q03049	344 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	TPO3	Q06451	622 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	DIN7	Q12086	430 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	TIR4	Q12218	487 aa	Predicted RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	YLR108C	Q12259	485 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	RDI1	Q12434	202 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YLR099W-A	Q3E798	87 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	SRN2	Q99176	213 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
XKS1	YGR194C	UBR1	P19812	1950 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	YLR415C	O13578	112 aa		4.07	□□□□□ -1.76
XKS1	YGR194C	MET3	P08536	511 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms