RNA–Protein interactions for RNA: YDL140C

RPO21, Transcript of RNA polymerase II largest subunit B220, yeastyeast

Gene RPO21, Length 5,202 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPO21YDL140C RIP1P08067 215 aa3.54□□□□□ -1.84
RPO21YDL140C RFA1P22336 621 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C PTC1P35182 281 aa3.54□□□□□ -1.84
RPO21YDL140C YJR012CP47087 207 aa3.54□□□□□ -1.84
RPO21YDL140C SPC2Q04969 178 aa3.54□□□□□ -1.84
RPO21YDL140C IPK1Q06667 281 aa3.54□□□□□ -1.84
RPO21YDL140C RDL2Q08742 149 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C INH1P01097 85 aa3.54□□□□□ -1.84
RPO21YDL140C MSS18P08593 268 aa3.54□□□□□ -1.84
RPO21YDL140C GLC7P32598 312 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C ECM15P35195 104 aa3.54□□□□□ -1.84
RPO21YDL140C RTC2P38279 296 aa3.54□□□□□ -1.84
RPO21YDL140C YHR138CP38841 114 aaPredicted RBP3.54□□□□□ -1.84
RPO21YDL140C SMA2Q04658 369 aa3.54□□□□□ -1.84
RPO21YDL140C SOG2Q08817 791 aa3.54□□□□□ -1.84
RPO21YDL140C BMT6Q12291 365 aa3.54□□□□□ -1.84
RPO21YDL140C YPR064WQ12492 139 aa3.54□□□□□ -1.84
RPO21YDL140C GCN2P15442 1659 aa3.54□□□□□ -1.84
RPO21YDL140C ERG3P32353 365 aa3.54□□□□□ -1.84
RPO21YDL140C ERG1P32476 496 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C CDS1P38221 457 aa3.54□□□□□ -1.84
RPO21YDL140C PCL6P40038 420 aa3.54□□□□□ -1.84
RPO21YDL140C TTI2P47168 421 aa3.54□□□□□ -1.84
RPO21YDL140C PKP2P53170 491 aa3.54□□□□□ -1.84
RPO21YDL140C MAL13P53338 473 aa3.54□□□□□ -1.84
RPO21YDL140C INN1P53901 409 aa3.54□□□□□ -1.84
RPO21YDL140C RAF1Q06891 181 aa3.54□□□□□ -1.84
RPO21YDL140C YIG1Q08956 461 aa3.54□□□□□ -1.84
RPO21YDL140C MMT2Q08970 484 aa3.54□□□□□ -1.84
RPO21YDL140C YPL150WQ12152 901 aa3.54□□□□□ -1.84
RPO21YDL140C SEN1Q00416 2231 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C GAL7P08431 366 aa3.54□□□□□ -1.84
RPO21YDL140C MPH2P0CD99 609 aa3.54□□□□□ -1.84
RPO21YDL140C RPS23AP0CX29 145 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C RPS23BP0CX30 145 aa3.54□□□□□ -1.84
RPO21YDL140C AMS1P22855 1083 aa3.54□□□□□ -1.84
RPO21YDL140C ABZ1P37254 787 aaPredicted RBP3.54□□□□□ -1.84
RPO21YDL140C NTC20P38302 140 aaPredicted RBP3.54□□□□□ -1.84
RPO21YDL140C MDM31P38880 579 aa3.54□□□□□ -1.84
RPO21YDL140C AVT6P40074 448 aa3.54□□□□□ -1.84
RPO21YDL140C PKP1P40530 394 aa3.54□□□□□ -1.84
RPO21YDL140C GPP1P41277 250 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C MOB2P43563 287 aa3.54□□□□□ -1.84
RPO21YDL140C BUD13P46947 266 aaPredicted RBP3.54□□□□□ -1.84
RPO21YDL140C LIA1P47120 325 aaKnown RBP3.54□□□□□ -1.84
RPO21YDL140C NBP35P52920 328 aa3.54□□□□□ -1.84
RPO21YDL140C TIM11P81449 96 aaPredicted RBP3.54□□□□□ -1.84
RPO21YDL140C YMR111CQ04461 462 aaPredicted RBP3.54□□□□□ -1.84
RPO21YDL140C SYO1Q07395 620 aa3.54□□□□□ -1.84
RPO21YDL140C ORT1Q12375 292 aa3.54□□□□□ -1.84
RPO21YDL140C YEL068CP39977 110 aa3.53□□□□□ -1.84
RPO21YDL140C TPO3Q06451 622 aa3.53□□□□□ -1.84
RPO21YDL140C CSI2Q08054 341 aa3.53□□□□□ -1.84
RPO21YDL140C CHC1P22137 1653 aaKnown RBP3.53□□□□□ -1.84
RPO21YDL140C NUP192P47054 1683 aa3.53□□□□□ -1.84
RPO21YDL140C ERR1P0CX10 437 aa3.53□□□□□ -1.84
RPO21YDL140C ERR2P0CX11 437 aa3.53□□□□□ -1.84
RPO21YDL140C STE14P32584 239 aa3.53□□□□□ -1.84
RPO21YDL140C CLB6P32943 380 aa3.53□□□□□ -1.84
RPO21YDL140C TUL1P36096 758 aa3.53□□□□□ -1.84
RPO21YDL140C MNN9P39107 395 aaKnown RBP3.53□□□□□ -1.84
RPO21YDL140C ERR3P42222 437 aa3.53□□□□□ -1.84
RPO21YDL140C DID2P69771 204 aa3.53□□□□□ -1.84
RPO21YDL140C TMA20P89886 181 aaPredicted RBP3.53□□□□□ -1.84
RPO21YDL140C CAB5Q03941 241 aa3.53□□□□□ -1.84
RPO21YDL140C CCA1P21269 546 aa3.53□□□□□ -1.84
RPO21YDL140C DPB2P24482 689 aaPredicted RBP3.53□□□□□ -1.84
RPO21YDL140C SUI1P32911 108 aaKnown RBP3.53□□□□□ -1.84
RPO21YDL140C GPI8P49018 411 aa3.53□□□□□ -1.84
RPO21YDL140C AVT4P50944 713 aa3.53□□□□□ -1.84
RPO21YDL140C NSA1P53136 463 aaPredicted RBP3.53□□□□□ -1.84
RPO21YDL140C RRN9P53437 365 aa3.53□□□□□ -1.84
RPO21YDL140C FDC1Q03034 503 aa3.53□□□□□ -1.84
RPO21YDL140C GOT1Q03554 138 aa3.53□□□□□ -1.84
RPO21YDL140C ARR1Q06596 294 aa3.53□□□□□ -1.84
RPO21YDL140C RKM1Q08961 583 aaPredicted RBP3.53□□□□□ -1.84
RPO21YDL140C YPR022CQ12139 1133 aa3.53□□□□□ -1.84
RPO21YDL140C HMS1Q12398 434 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-LR1P0C2J4 438 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-FP0CX61 438 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-GR2P0CX62 438 aa3.53□□□□□ -1.84
RPO21YDL140C UNG1P12887 359 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-CP25383 438 aa3.53□□□□□ -1.84
RPO21YDL140C MRPL36P36531 177 aa3.53□□□□□ -1.84
RPO21YDL140C ARN2P38724 620 aa3.53□□□□□ -1.84
RPO21YDL140C EGD2P38879 174 aaKnown RBP3.53□□□□□ -1.84
RPO21YDL140C FKH2P41813 862 aa3.53□□□□□ -1.84
RPO21YDL140C CCC1P47818 322 aa3.53□□□□□ -1.84
RPO21YDL140C YGR015CP53208 328 aa3.53□□□□□ -1.84
RPO21YDL140C SYF2P53277 215 aaPredicted RBP3.53□□□□□ -1.84
RPO21YDL140C MPA43P53583 542 aaPredicted RBP3.53□□□□□ -1.84
RPO21YDL140C REX2P54964 269 aaKnown RBP3.53□□□□□ -1.84
RPO21YDL140C UBC7Q02159 165 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-DR2Q03483 438 aa3.53□□□□□ -1.84
RPO21YDL140C HNT1Q04344 158 aaKnown RBP3.53□□□□□ -1.84
RPO21YDL140C YDR286CQ05530 114 aa3.53□□□□□ -1.84
RPO21YDL140C DCS2Q12123 353 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-BQ12260 438 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-OR2Q12293 438 aa3.53□□□□□ -1.84
RPO21YDL140C TY2A-DR1Q12392 438 aa3.53□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms