RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 ZNF668Q96K58 619 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 ADAM2Q99965 735 aa16.81■□□□□ 0.28
PHGDH-231ENST00000641939 DHX33Q9H6R0 707 aaKnown RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 RC3H2Q9HBD1 1191 aaKnown RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 FNDC1Q4ZHG4 1894 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-231ENST00000641939 BRWD1Q9NSI6 2320 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 REV3LO60673 3130 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 ZBTB39O15060 712 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-231ENST00000641939 MGEA5O60502 916 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 DGKIO75912 1065 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 LYPLA2O95372 231 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
PHGDH-231ENST00000641939 RFC5P40937 340 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 SARSP49591 514 aaKnown RBP16.8■□□□□ 0.28
PHGDH-231ENST00000641939 GRB10Q13322 594 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 XKR9Q5GH70 373 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 MCTP1Q6DN14 999 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 RHPN2Q8IUC4 686 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 FIBCD1Q8N539 461 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 GDPD5Q8WTR4 605 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 PPM1EQ8WY54 764 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 ZNF689Q96CS4 500 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-231ENST00000641939 SAMD11Q96NU1 681 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 C17orf80Q9BSJ5 609 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 RGS18Q9NS28 235 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 C1orf112Q9NSG2 853 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 LRFN2Q9ULH4 789 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 MTCH2Q9Y6C9 303 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 MYO7AQ13402 2215 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 KIAA1671Q9BY89 1806 aa16.8■□□□□ 0.28
PHGDH-231ENST00000641939 VCANP13611 3396 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 ADGRA3Q8IWK6 1321 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 H3BQV1 296 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 GAS2O43903 313 aaKnown RBP16.79■□□□□ 0.28
PHGDH-231ENST00000641939 LPXNO60711 386 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 TECP42680 631 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 TOB1P50616 345 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-231ENST00000641939 NBR1Q14596 966 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 CCDC85BQ15834 202 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-231ENST00000641939 SLC24A5Q71RS6 500 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 ZNF410Q86VK4 478 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 C4orf32Q8N8J7 132 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 FBXO22Q8NEZ5 403 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 GCOM2Q9BZD3 368 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-231ENST00000641939 ANKEF1Q9NU02 776 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 RNF216Q9NWF9 866 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-231ENST00000641939 PCDHB7Q9Y5E2 793 aa16.79■□□□□ 0.28
PHGDH-231ENST00000641939 A0A087WZ62 844 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 C9IYK1 514 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 IBSPP21815 317 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-231ENST00000641939 BTG3Q14201 252 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-231ENST00000641939 DSC3Q14574 896 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 EMC2Q15006 297 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 EPC2Q52LR7 807 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.78■□□□□ 0.28
PHGDH-231ENST00000641939 TMEM192Q8IY95 271 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 TCP11Q8WWU5 503 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 PSPC1Q8WXF1 523 aaKnown RBP16.78■□□□□ 0.28
PHGDH-231ENST00000641939 NLRP4Q96MN2 994 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 CCDC43Q96MW1 224 aaKnown RBP16.78■□□□□ 0.28
PHGDH-231ENST00000641939 FDXACB1Q9BRP7 624 aaPredicted RBP16.78■□□□□ 0.28
PHGDH-231ENST00000641939 TUFT1Q9NNX1 390 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 PCDHB6Q9Y5E3 794 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 COL4A3BPQ9Y5P4 624 aa16.78■□□□□ 0.28
PHGDH-231ENST00000641939 SPATA31C1P0DKV0 1188 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 ZSCAN20P17040 1043 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 FAM189BP81408 668 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 PTGDRQ13258 359 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 CUL4AQ13619 759 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 LARP1BQ659C4 914 aaKnown RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 CATSPER3Q86XQ3 398 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 KSR1Q8IVT5 923 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 ERMNQ8TAM6 284 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 PRPF31Q8WWY3 499 aaKnown RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 CLP1Q92989 425 aaKnown RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 POLR3CQ9BUI4 534 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 INO80BQ9C086 356 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 BMP2KQ9NSY1 1161 aaPredicted RBP16.77■□□□□ 0.28
PHGDH-231ENST00000641939 LMCD1Q9NZU5 365 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 RWDD3Q9Y3V2 267 aa16.77■□□□□ 0.28
PHGDH-231ENST00000641939 MED24O75448 989 aa16.76■□□□□ 0.27
PHGDH-231ENST00000641939 CSDE1O75534 798 aaKnown RBP16.76■□□□□ 0.27
PHGDH-231ENST00000641939 DGAT1O75907 488 aa16.76■□□□□ 0.27
PHGDH-231ENST00000641939 XRCC6P12956 609 aaKnown RBP eCLIP16.76■□□□□ 0.27
PHGDH-231ENST00000641939 FGFR4P22455 802 aa16.76■□□□□ 0.27
PHGDH-231ENST00000641939 SFPQP23246 707 aaKnown RBP eCLIP16.76■□□□□ 0.27
PHGDH-231ENST00000641939 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.272e-7■■■■□ 21.4
PHGDH-231ENST00000641939 RILPL1Q5EBL4 403 aa16.76■□□□□ 0.27
PHGDH-231ENST00000641939 CMTR2Q8IYT2 770 aaKnown RBP16.76■□□□□ 0.27
PHGDH-231ENST00000641939 PIGOQ8TEQ8 1089 aa16.76■□□□□ 0.27
PHGDH-231ENST00000641939 MTRQ99707 1265 aa16.76■□□□□ 0.27
PHGDH-231ENST00000641939 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.76■□□□□ 0.27
PHGDH-231ENST00000641939 A0A087WWV3 80 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 H3BNC9 293 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 LAD1O00515 517 aa16.75■□□□□ 0.27
PHGDH-231ENST00000641939 ASAP2O43150 1006 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms