RNA–Protein interactions for RNA: ENST00000641539.1

C19orf48-215, Transcript of chromosome 19 open reading frame 48, human

Gene C19orf48, Length 717 nt, Biotype transcribed unitary pseudogene, Subcellular localisation Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C19orf48-215	ENST00000641539	OTOP3	Q7RTS5	596 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	TMTC2	Q8N394	836 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	RNF169	Q8NCN4	708 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	CTCFL	Q8NI51	663 aa	Predicted RBP	13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	CNTNAP3B	Q96NU0	1288 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	CNTNAP3	Q9BZ76	1288 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	PCDHA6	Q9UN73	950 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	PCDHA8	Q9Y5H6	950 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539		R4GN57	208 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	NFASC	O94856	1347 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	FRYL	O94915	3013 aa		13.55	□□□□□ -0.24
C19orf48-215	ENST00000641539	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	BACH1	O14867	736 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	ZSCAN20	P17040	1043 aa	Predicted RBP	13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	RFX1	P22670	979 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	MCM5	P33992	734 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	ALDH7A1	P49419	539 aa	Known RBP	13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	METAP2	P50579	478 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	5e-7	■□□□□ 10.1
C19orf48-215	ENST00000641539	TSGA10IP	Q3SY00	556 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	CABP7	Q86V35	215 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	TMEM169	Q96HH4	297 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	MXRA8	Q9BRK3	442 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	KCNK12	Q9HB15	430 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	ACACB	O00763	2458 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	COL1A2	P08123	1366 aa		13.54	□□□□□ -0.24
C19orf48-215	ENST00000641539	SPDYE4	A6NLX3	237 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	NT5C1B-RDH14	C9J2C7	533 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	GPR32	O75388	356 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	ATG7	O95352	703 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	VTN	P04004	478 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	HMGB1	P09429	215 aa	Known RBP	13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	SMARCA1	P28370	1054 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	KIF5B	P33176	963 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	GIT2	Q14161	759 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	ZNF484	Q5JVG2	852 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	CLLU1OS	Q5K130	101 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	FAM160B1	Q5W0V3	765 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	ZC3H14	Q6PJT7	736 aa	Known RBP	13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	ECHDC2	Q86YB7	292 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	VPS52	Q8N1B4	723 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	METTL13	Q8N6R0	699 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	FEZF2	Q8TBJ5	459 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	AUTS2	Q8WXX7	1259 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	RIN2	Q8WYP3	895 aa	Predicted RBP	13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	TMEM87B	Q96K49	555 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	MAP3K14	Q99558	947 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	LZTS2	Q9BRK4	669 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	ZBP1	Q9H171	429 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	SFXN1	Q9H9B4	322 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	DLL3	Q9NYJ7	618 aa		13.53	□□□□□ -0.24
C19orf48-215	ENST00000641539	SPTBN2	O15020	2390 aa		13.52	□□□□□ -0.24
C19orf48-215	ENST00000641539	IGKV6D-21	A0A0A0MT36	114 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	BCAR1	P56945	870 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	ITGB3BP	Q13352	177 aa	Predicted RBP	13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	GPR149	Q86SP6	731 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	HELQ	Q8TDG4	1101 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	SLC22A17	Q8WUG5	538 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	RUBCN	Q92622	972 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	MYL10	Q9BUA6	226 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	MRPL9	Q9BYD2	267 aa	Known RBP	13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	AGO4	Q9HCK5	861 aa	Known RBP	13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	IGSF9	Q9P2J2	1179 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	WNT16	Q9UBV4	365 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	IRAK3	Q9Y616	596 aa		13.52	□□□□□ -0.25
C19orf48-215	ENST00000641539	C2orf16	Q68DN1	1984 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	ZBTB42	B2RXF5	422 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	DDX39A	O00148	427 aa	Known RBP	13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	NARS	O43776	548 aa	Known RBP	13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	DDAH1	O94760	285 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	PLEKHA8P1	O95397	391 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	C22orf31	O95567	290 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	CFH	P08603	1231 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	CTSA	P10619	480 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	GNAQ	P50148	359 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	POLG	P54098	1239 aa	Predicted RBP	13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	PDXDC2P	Q6P474	469 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	ABHD15	Q6UXT9	468 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	PPFIBP1	Q86W92	1011 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	ZNF654	Q8IZM8	581 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	DCLK2	Q8N568	766 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	ZNF302	Q9NR11	478 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	FANCM	Q8IYD8	2048 aa		13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	MYH9	P35579	1960 aa	Known RBP	13.51	□□□□□ -0.25
C19orf48-215	ENST00000641539	KRBA1	A5PL33	1030 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	PRC1	O43663	620 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	ZC3H11A	O75152	810 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	CCNE2	O96020	404 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	PSMA5	P28066	241 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	HSPA4	P34932	840 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	TBC1D8B	Q0IIM8	1120 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	LETM2	Q2VYF4	491 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	CEP55	Q53EZ4	464 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	SPECC1	Q5M775	1068 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	DDX53	Q86TM3	631 aa	Known RBP	13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	TMEM173	Q86WV6	379 aa	Predicted RBP	13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	CKAP2L	Q8IYA6	745 aa		13.5	□□□□□ -0.25
C19orf48-215	ENST00000641539	CMTR1	Q8N1G2	835 aa	Known RBP	13.5	□□□□□ -0.25

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