RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 NLRP7Q8WX94 980 aa17.71■□□□□ 0.43
SPIN3-240ENST00000640507 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.43
SPIN3-240ENST00000640507 DYDC2Q96IM9 177 aa17.71■□□□□ 0.43
SPIN3-240ENST00000640507 ZNF668Q96K58 619 aaPredicted RBP17.71■□□□□ 0.43
SPIN3-240ENST00000640507 CEP170P1Q96L14 293 aa17.71■□□□□ 0.43
SPIN3-240ENST00000640507 LXNQ9BS40 222 aa17.71■□□□□ 0.43
SPIN3-240ENST00000640507 EVPLQ92817 2033 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 ZSCAN20P17040 1043 aaPredicted RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 YWHABP31946 246 aaKnown RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 TXKP42681 527 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 NPEPPSP55786 919 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 CTTNQ14247 550 aaKnown RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 PTPROQ16827 1216 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 MRPL38Q96DV4 380 aaKnown RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 ASB2Q96Q27 587 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 HSD17B14Q9BPX1 270 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 EIF2AK1Q9BQI3 630 aaKnown RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 GCOM2Q9BZD3 368 aaPredicted RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 ELAC1Q9H777 363 aaKnown RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 SUCLA2Q9P2R7 463 aaPredicted RBP17.7■□□□□ 0.42
SPIN3-240ENST00000640507 A0A0C4DFX4 3053 aa17.7■□□□□ 0.42
SPIN3-240ENST00000640507 ATP2B1P20020 1258 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 MCM7P33993 719 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 CTNNB1P35222 781 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 CYP4A11Q02928 519 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
SPIN3-240ENST00000640507 ZNF410Q86VK4 478 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 TPH2Q8IWU9 490 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 ZNF579Q8NAF0 562 aaKnown RBP17.69■□□□□ 0.42
SPIN3-240ENST00000640507 NEK9Q8TD19 979 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 SLC7A3Q8WY07 619 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 PLVAPQ9BX97 442 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 TMEM60Q9H2L4 133 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 DHX33Q9H6R0 707 aaKnown RBP17.69■□□□□ 0.42
SPIN3-240ENST00000640507 TMEM161AQ9NX61 479 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 COG5Q9UP83 839 aa17.69■□□□□ 0.42
SPIN3-240ENST00000640507 PRRC2BQ5JSZ5 2229 aaKnown RBP17.69■□□□□ 0.42
SPIN3-240ENST00000640507 A0A087WZ62 844 aa17.68■□□□□ 0.42
SPIN3-240ENST00000640507 LYPLA2O95372 231 aa17.68■□□□□ 0.42
SPIN3-240ENST00000640507 RFC5P40937 340 aa17.68■□□□□ 0.42
SPIN3-240ENST00000640507 FDXACB1Q9BRP7 624 aaPredicted RBP17.68■□□□□ 0.42
SPIN3-240ENST00000640507 C11orf84Q9BUA3 381 aaPredicted RBP17.68■□□□□ 0.42
SPIN3-240ENST00000640507 INO80BQ9C086 356 aaPredicted RBP17.68■□□□□ 0.42
SPIN3-240ENST00000640507 MRPL42Q9Y6G3 142 aaKnown RBP17.68■□□□□ 0.42
SPIN3-240ENST00000640507 WDR81Q562E7 1941 aa17.68■□□□□ 0.42
SPIN3-240ENST00000640507 ZBTB39O15060 712 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 MCM2P49736 904 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 POLGP54098 1239 aaPredicted RBP17.67■□□□□ 0.42
SPIN3-240ENST00000640507 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
SPIN3-240ENST00000640507 AAK1Q2M2I8 961 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 NAALADL2Q58DX5 795 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 XKR9Q5GH70 373 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 FAM102BQ5T8I3 360 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 NOSTRINQ8IVI9 506 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 P2RX5Q93086 422 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 HLA-CQ95604 372 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 TMX3Q96JJ7 454 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 TBC1D32Q96NH3 1257 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 LMAN2LQ9H0V9 348 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 ATP6V0A4Q9HBG4 840 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 CHST12Q9NRB3 414 aa17.67■□□□□ 0.42
SPIN3-240ENST00000640507 GAS2O43903 313 aaKnown RBP17.66■□□□□ 0.42
SPIN3-240ENST00000640507 IBSPP21815 317 aaPredicted RBP17.66■□□□□ 0.42
SPIN3-240ENST00000640507 FGFR4P22455 802 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.428e-6■■■■□ 19.7
SPIN3-240ENST00000640507 TRAPPC10P48553 1259 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 GATMP50440 423 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 ZNF174Q15697 407 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 PAN2Q504Q3 1202 aaKnown RBP17.66■□□□□ 0.42
SPIN3-240ENST00000640507 KSR1Q8IVT5 923 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 ANKEF1Q9NU02 776 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 KIF3AQ9Y496 699 aa17.66■□□□□ 0.42
SPIN3-240ENST00000640507 LOXHD1Q8IVV2 1947 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 A0A0U1RQF3 1178 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 ASAP2O43150 1006 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 CSDE1O75534 798 aaKnown RBP17.65■□□□□ 0.42
SPIN3-240ENST00000640507 XRCC6P12956 609 aaKnown RBP eCLIP17.65■□□□□ 0.42
SPIN3-240ENST00000640507 SFPQP23246 707 aaKnown RBP eCLIP17.65■□□□□ 0.42
SPIN3-240ENST00000640507 TFF2Q03403 129 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 TTC38Q5R3I4 469 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 ECHDC2Q86YB7 292 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 TCP11Q8WWU5 503 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 PRPF31Q8WWY3 499 aaKnown RBP17.65■□□□□ 0.42
SPIN3-240ENST00000640507 PSPC1Q8WXF1 523 aaKnown RBP17.65■□□□□ 0.42
SPIN3-240ENST00000640507 TMEM143Q96AN5 459 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 IFT122Q9HBG6 1241 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 DACT1Q9NYF0 836 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 TRANK1O15050 2925 aa17.65■□□□□ 0.42
SPIN3-240ENST00000640507 POTEMA6NI47 508 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 TBKBP1A7MCY6 615 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 GRM6O15303 877 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 HOXA2O43364 376 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 CD2BP2O95400 341 aaKnown RBP17.64■□□□□ 0.42
SPIN3-240ENST00000640507 TECP42680 631 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 TIGD5Q53EQ6 642 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 NLRP4Q96MN2 994 aa17.64■□□□□ 0.42
SPIN3-240ENST00000640507 TRAIPQ9BWF2 469 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms