RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 SLC35G2Q8TBE7 412 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 CTNNBL1Q8WYA6 563 aaPredicted RBP21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 NAP1L3Q99457 506 aaPredicted RBP21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 DAAM1Q9Y4D1 1078 aa21.85■■□□□ 1.09
SYNGAP1-227ENST00000638142 UBR3Q6ZT12 1888 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 TRAPPC3O43617 180 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 PAEPP09466 180 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 FMO5P49326 533 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 ICA1Q05084 483 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 PPATQ06203 517 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 DRP2Q13474 957 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 USH1GQ495M9 461 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 C6orf89Q6UWU4 347 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 GMCL1P1Q8NEA9 526 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 GMCL1Q96IK5 515 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 SYT11Q9BT88 431 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 CARD9Q9H257 536 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 OSGEPQ9NPF4 335 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 UBE4BO95155 1302 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 F5H6K3 240 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 EML1O00423 815 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 PTENP60484 403 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 KLRC3Q07444 240 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 DHX9Q08211 1270 aaKnown RBP21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 DRAP1Q14919 205 aaPredicted RBP21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 CLUL1Q15846 466 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 ODF2Q5BJF6 829 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 SIAH1Q8IUQ4 282 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 BCAS3Q9H6U6 928 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 TUFT1Q9NNX1 390 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 RGL1Q9NZL6 768 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 PI4KBQ9UBF8 816 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 DNAJC12Q9UKB3 198 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 SIPA1L1O43166 1804 aa21.84■■□□□ 1.09
SYNGAP1-227ENST00000638142 DDX3YO15523 660 aaKnown RBP21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 ZNF76P36508 570 aa21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 EIF3BP55884 814 aaKnown RBP21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 GSCP56915 257 aaPredicted RBP21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 DDR1Q08345 913 aa21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 PLCB4Q15147 1175 aa21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 SYDE2Q5VT97 1194 aa21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 MYCT1Q8N699 235 aa21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 CELF4Q9BZC1 486 aaKnown RBP21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 BCCIPQ9P287 314 aaKnown RBP eCLIP21.83■■□□□ 1.09
SYNGAP1-227ENST00000638142 CRKP46108 304 aa21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 SHROOM1Q2M3G4 852 aaPredicted RBP21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 TMEM179Q6ZVK1 233 aa21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 ZDHHC15Q96MV8 337 aa21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 HSD17B14Q9BPX1 270 aa21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 SEL1LQ9UBV2 794 aa21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 FRMPD4Q14CM0 1322 aa21.83■■□□□ 1.08
SYNGAP1-227ENST00000638142 FAM196BA6NMK8 535 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 PPFIA2O75334 1257 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 SNAP25P60880 206 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 RNF187Q5TA31 235 aaPredicted RBP21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 C1orf186Q6ZWK4 172 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 ARMC9Q7Z3E5 817 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 FMO2Q99518 471 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 PARVGQ9HBI0 331 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 PPP1R9AQ9ULJ8 1098 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 NOVA2Q9UNW9 492 aaKnown RBP21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 GOLGA6L10A0A0M3HER8 536 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 SFI1A8K8P3 1242 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 POLRMTO00411 1230 aaKnown RBP21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 NMT1P30419 496 aaKnown RBP21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 IFT88Q13099 833 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 IKQ13123 557 aaPredicted RBP21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 PLS1Q14651 629 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 PPP2R5AQ15172 486 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 TATDN1Q6P1N9 297 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 STXBP4Q6ZWJ1 553 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 HS2ST1Q7LGA3 356 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 CYP2W1Q8TAV3 490 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 DPH5Q9H2P9 285 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 VCPKMTQ9H867 229 aa21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 A1CFQ9NQ94 594 aaKnown RBP21.82■■□□□ 1.08
SYNGAP1-227ENST00000638142 PIK3CDO00329 1044 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 SETQ01105 290 aaPredicted RBP21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 ACTN3Q08043 901 aaPredicted RBP21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 DOK7Q18PE1 504 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 KRT71Q3SY84 523 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 DCAF12L1Q5VU92 463 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 ATP8B4Q8TF62 1192 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 TXLNGYQ9BZA5 131 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 GPR88Q9GZN0 384 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 IGLV3-22A0A075B6J6 115 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 OPLAHO14841 1288 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 NDUFB10O96000 172 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 PIGOQ8TEQ8 1089 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 APEX2Q9UBZ4 518 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 FRMD4BQ9Y2L6 1034 aa21.81■■□□□ 1.08
SYNGAP1-227ENST00000638142 IGSF9BQ9UPX0 1349 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 FAM187AA6NFU0 413 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 DDTLA6NHG4 134 aaPredicted RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 POLD1P28340 1107 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 CTTNQ14247 550 aaKnown RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 TEX2Q8IWB9 1127 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 TRIM51Q9BSJ1 452 aa21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 INTS2Q9H0H0 1204 aaKnown RBP21.8■■□□□ 1.08
SYNGAP1-227ENST00000638142 CNOT10Q9H9A5 744 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms