RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 RBM25P49756 843 aaKnown RBP19.88■□□□□ 0.77
PNKP-230ENST00000638016 CMTR2Q8IYT2 770 aaKnown RBP19.88■□□□□ 0.77
PNKP-230ENST00000638016 ADAMTS19Q8TE59 1207 aa19.88■□□□□ 0.77
PNKP-230ENST00000638016 NLRP7Q8WX94 980 aa19.88■□□□□ 0.77
PNKP-230ENST00000638016 NAP1L4Q99733 375 aaKnown RBP19.88■□□□□ 0.77
PNKP-230ENST00000638016 CYP26B1Q9NR63 512 aa19.88■□□□□ 0.77
PNKP-230ENST00000638016 LRFN2Q9ULH4 789 aa19.88■□□□□ 0.77
PNKP-230ENST00000638016 NCOR1O75376 2440 aa19.88■□□□□ 0.77
PNKP-230ENST00000638016 A0A087WZ62 844 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 C5orf67F2Z3F1 127 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 CD2BP2O95400 341 aaKnown RBP19.87■□□□□ 0.77
PNKP-230ENST00000638016 P4HBP07237 508 aaKnown RBP19.87■□□□□ 0.77
PNKP-230ENST00000638016 STAG3L1P0CL83 205 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 DARSP14868 501 aaKnown RBP19.87■□□□□ 0.77
PNKP-230ENST00000638016 EIF4BP23588 611 aaKnown RBP19.87■□□□□ 0.77
PNKP-230ENST00000638016 EPHA7Q15375 998 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 CALCRLQ16602 461 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 TCEAL5Q5H9L2 206 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 SLC24A5Q71RS6 500 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 C8orf76Q96K31 380 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 FDXACB1Q9BRP7 624 aaPredicted RBP19.87■□□□□ 0.77
PNKP-230ENST00000638016 ALG13Q9NP73 1137 aaKnown RBP19.87■□□□□ 0.77
PNKP-230ENST00000638016 PCDHB7Q9Y5E2 793 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 PLXNA4Q9HCM2 1894 aa19.87■□□□□ 0.77
PNKP-230ENST00000638016 A0A087WWV3 80 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 TBKBP1A7MCY6 615 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 NEMFO60524 1076 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 MAFO75444 373 aaPredicted RBP19.86■□□□□ 0.77
PNKP-230ENST00000638016 BMP1P13497 986 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 DNAJB1P25685 340 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 TXKP42681 527 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 RHPN2Q8IUC4 686 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 SLFN12Q8IYM2 578 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 HLA-CQ95604 372 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 CEP170P1Q96L14 293 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 C1orf112Q9NSG2 853 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 RNF19AQ9NV58 838 aa19.86■□□□□ 0.77
PNKP-230ENST00000638016 SUCLA2Q9P2R7 463 aaPredicted RBP19.86■□□□□ 0.77
PNKP-230ENST00000638016 POTEMA6NI47 508 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 YWHABP31946 246 aaKnown RBP19.85■□□□□ 0.77
PNKP-230ENST00000638016 MCM7P33993 719 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 CAMK1Q14012 370 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 TPH2Q8IWU9 490 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 TMEM143Q96AN5 459 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 ZSCAN31Q96LW9 406 aaPredicted RBP19.85■□□□□ 0.77
PNKP-230ENST00000638016 NLRP4Q96MN2 994 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 MTMR9Q96QG7 549 aa19.85■□□□□ 0.77
PNKP-230ENST00000638016 EIF2AK1Q9BQI3 630 aaKnown RBP19.85■□□□□ 0.77
PNKP-230ENST00000638016 LLPHQ9BRT6 129 aaKnown RBP19.85■□□□□ 0.77
PNKP-230ENST00000638016 TTC12Q9H892 705 aaPredicted RBP19.85■□□□□ 0.77
PNKP-230ENST00000638016 SLITRK3O94933 977 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 BAG4O95429 457 aaKnown RBP19.84■□□□□ 0.77
PNKP-230ENST00000638016 ITGB1P05556 798 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 NBR1Q14596 966 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 PTPROQ16827 1216 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 ODR4Q5SWX8 454 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 C4orf19Q8IY42 314 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 KLHL23Q8NBE8 558 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 SYMPKQ92797 1274 aaKnown RBP19.84■□□□□ 0.77
PNKP-230ENST00000638016 C11orf84Q9BUA3 381 aaPredicted RBP19.84■□□□□ 0.77
PNKP-230ENST00000638016 UBE2ZQ9H832 354 aaPredicted RBP19.84■□□□□ 0.77
PNKP-230ENST00000638016 SH2B1Q9NRF2 756 aaPredicted RBP19.84■□□□□ 0.77
PNKP-230ENST00000638016 PCDHA12Q9UN75 941 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 COG5Q9UP83 839 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 PLAGL2Q9UPG8 496 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 PCDHGC5Q9Y5F6 944 aa19.84■□□□□ 0.77
PNKP-230ENST00000638016 RB1P06400 928 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 ATF7P17544 494 aaPredicted RBP19.83■□□□□ 0.77
PNKP-230ENST00000638016 IRS1P35568 1242 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 POLGP54098 1239 aaPredicted RBP19.83■□□□□ 0.77
PNKP-230ENST00000638016 FAM189BP81408 668 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 ZNF174Q15697 407 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 ECHDC2Q86YB7 292 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 RNF169Q8NCN4 708 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 UHRF1Q96T88 793 aaPredicted RBP19.83■□□□□ 0.77
PNKP-230ENST00000638016 DHX33Q9H6R0 707 aaKnown RBP19.83■□□□□ 0.77
PNKP-230ENST00000638016 ATP6V0A4Q9HBG4 840 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 TMEM161AQ9NX61 479 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 RWDD3Q9Y3V2 267 aa19.83■□□□□ 0.77
PNKP-230ENST00000638016 KCNA5P22460 613 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 GTF2F1P35269 517 aaKnown RBP eCLIP19.82■□□□□ 0.76
PNKP-230ENST00000638016 DNM2P50570 870 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 EMC2Q15006 297 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 SAFBQ15424 915 aaKnown RBP eCLIP19.82■□□□□ 0.76
PNKP-230ENST00000638016 LONRF3Q496Y0 759 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 TIGD5Q53EQ6 642 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 XKR9Q5GH70 373 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 FAM184AQ8NB25 1140 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 IL27Q8NEV9 243 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 FBXO18Q8NFZ0 1043 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 HSD17B14Q9BPX1 270 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 GCOM2Q9BZD3 368 aaPredicted RBP19.82■□□□□ 0.76
PNKP-230ENST00000638016 NSUN3Q9H649 340 aaKnown RBP19.82■□□□□ 0.76
PNKP-230ENST00000638016 ZSWIM4Q9H7M6 989 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 IFT122Q9HBG6 1241 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 XPNPEP1Q9NQW7 623 aa19.82■□□□□ 0.76
PNKP-230ENST00000638016 TYW1Q9NV66 732 aaKnown RBP19.82■□□□□ 0.76
PNKP-230ENST00000638016 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.81■□□□□ 0.76
PNKP-230ENST00000638016 ZSCAN20P17040 1043 aaPredicted RBP19.81■□□□□ 0.76
PNKP-230ENST00000638016 PBX3P40426 434 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms