RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 ALCAMQ13740 583 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 MXD4Q14582 209 aaPredicted RBP14.8□□□□□ -0.04
LINC00643-207ENST00000637212 PPP2R5AQ15172 486 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 GRIK4Q16099 956 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 ODR4Q5SWX8 454 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 MTHFD1LQ6UB35 978 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 MAEAQ7L5Y9 396 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 ZNF720Q7Z2F6 126 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 GAS2L3Q86XJ1 694 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 GUF1Q8N442 669 aaKnown RBP14.8□□□□□ -0.04
LINC00643-207ENST00000637212 KCNN1Q92952 543 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 IFT74Q96LB3 600 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 SEZ6LQ9BYH1 1024 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 UNC93B1Q9H1C4 597 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 DNAJC25Q9H1X3 360 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 ST6GALNAC4Q9H4F1 302 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 MRPL44Q9H9J2 332 aaKnown RBP14.8□□□□□ -0.04
LINC00643-207ENST00000637212 SLC39A2Q9NP94 309 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 PCDHB13Q9Y5F0 798 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 ZSWIM8A7E2V4 1837 aa14.8□□□□□ -0.04
LINC00643-207ENST00000637212 MBLAC1A4D2B0 266 aaPredicted RBP14.79□□□□□ -0.04
LINC00643-207ENST00000637212 SMTNL1A8MU46 457 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 H0YCG3 227 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 MCM3APO60318 1980 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 C22orf31O95567 290 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 CCL5P13501 91 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 PRCPP42785 496 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 GSE1Q14687 1217 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 MARCH8Q5T0T0 291 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 EFCAB12Q6NXP0 572 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 FOXR2Q6PJQ5 311 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 CXCL17Q6UXB2 119 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 EPM2AIP1Q7L775 607 aaPredicted RBP14.79□□□□□ -0.04
LINC00643-207ENST00000637212 SESTD1Q86VW0 696 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 SFR1Q86XK3 245 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 FAM178BQ8IXR5 827 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 MYOCDQ8IZQ8 938 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 ZNF710Q8N1W2 664 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 C7orf31Q8N865 590 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 KIAA0895Q8NCT3 520 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 ZNF507Q8TCN5 953 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 FAM200AQ8TCP9 573 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 TMEM143Q96AN5 459 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 ARMC5Q96C12 935 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 FIZ1Q96SL8 496 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 POLR3FQ9H1D9 316 aaPredicted RBP14.79□□□□□ -0.04
LINC00643-207ENST00000637212 RWDD2AQ9UIY3 292 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 GDAQ9Y2T3 454 aa14.79□□□□□ -0.04
LINC00643-207ENST00000637212 PSMA7O14818 248 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 EIF3DO15371 548 aaKnown RBP eCLIP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 HOXC8P31273 242 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 NAMPTP43490 491 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 ACLYP53396 1101 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 PEX3P56589 373 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 ADAM17P78536 824 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 PTPN11Q06124 597 aaPredicted RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 POU5F1BQ06416 359 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 MKRN4PQ13434 485 aaPredicted RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 BMT2Q1RMZ1 405 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 NBPF20Q3BBV1 942 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 NFRKBQ6P4R8 1299 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 LINC01465Q8N7H1 131 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 ENOX1Q8TC92 643 aaKnown RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 PRPF31Q8WWY3 499 aaKnown RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 PSPC1Q8WXF1 523 aaKnown RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 STRA6Q9BX79 667 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 RNF208Q9H0X6 261 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 SUGCTQ9HAC7 445 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 POLD4Q9HCU8 107 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 GPRC5CQ9NQ84 441 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 SETD4Q9NVD3 440 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 RNF216Q9NWF9 866 aaPredicted RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 SUCLA2Q9P2R7 463 aaPredicted RBP14.78□□□□□ -0.04
LINC00643-207ENST00000637212 OGDHLQ9ULD0 1010 aa14.78□□□□□ -0.04
LINC00643-207ENST00000637212 UBE4BO95155 1302 aa14.77□□□□□ -0.04
LINC00643-207ENST00000637212 SMIM35A0A1B0GVV1 85 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 C17orf102A2RUQ5 167 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 IKBKBO14920 756 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
LINC00643-207ENST00000637212 GLRA2P23416 452 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 NPTX2P47972 431 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 NCKAP1LP55160 1127 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 IGBP1P78318 339 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 GTF2BQ00403 316 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 IQCB1Q15051 598 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 UVSSAQ2YD98 709 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 CENPPQ6IPU0 288 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 C11orf57Q6ZUT1 292 aaPredicted RBP14.77□□□□□ -0.05
LINC00643-207ENST00000637212 NME8Q8N427 588 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 SCFD1Q8WVM8 642 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 LMBR1Q8WVP7 490 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 TRAPPC12Q8WVT3 735 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 HPS3Q969F9 1004 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 ZNF333Q96JL9 665 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 RBSNQ9H1K0 784 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 CBX8Q9HC52 389 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 KMT5AQ9NQR1 393 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 TBC1D7Q9P0N9 293 aa14.77□□□□□ -0.05
LINC00643-207ENST00000637212 HDAC6Q9UBN7 1215 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms