RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 AS3MTQ9HBK9 375 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.22□□□□□ -0.29
CLN8-212ENST00000637083 SAMM50Q9Y512 469 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 K7ENM7 598 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 DDX39AO00148 427 aaKnown RBP13.22□□□□□ -0.29
CLN8-212ENST00000637083 NFIBO00712 420 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 ZBTB39O15060 712 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 ZBTB7AO95365 584 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 AARSP49588 968 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLN8-212ENST00000637083 NPEPPSP55786 919 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 RPS6KA1Q15418 735 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 INTS8Q75QN2 995 aaKnown RBP13.22□□□□□ -0.29
CLN8-212ENST00000637083 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 C12orf56Q8IXR9 622 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 CPXCR1Q8N123 301 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 SYTL5Q8TDW5 730 aaPredicted RBP13.22□□□□□ -0.29
CLN8-212ENST00000637083 STIM2Q9P246 746 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 PPP1R9AQ9ULJ8 1098 aa13.22□□□□□ -0.29
CLN8-212ENST00000637083 H3BQF6 201 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 MAPK13O15264 365 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 DHX15O43143 795 aaKnown RBP13.21□□□□□ -0.29
CLN8-212ENST00000637083 NCK2O43639 380 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 DKC1O60832 514 aaKnown RBP eCLIP13.21□□□□□ -0.29
CLN8-212ENST00000637083 PPP1R37O75864 691 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 SOX5P35711 763 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 NOP2P46087 812 aaKnown RBP13.21□□□□□ -0.29
CLN8-212ENST00000637083 CYP2J2P51589 502 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 KRT76Q01546 638 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 BFSP1Q12934 665 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 EMBQ6PCB8 327 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 SLC30A10Q6XR72 485 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 IFT20Q8IY31 132 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 C4orf19Q8IY42 314 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 RDM1Q8NG50 284 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 CALR3Q96L12 384 aaKnown RBP13.21□□□□□ -0.29
CLN8-212ENST00000637083 ST6GALNAC4Q9H4F1 302 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 SUGCTQ9HAC7 445 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 POLD4Q9HCU8 107 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 WRAP73Q9P2S5 460 aaPredicted RBP13.21□□□□□ -0.29
CLN8-212ENST00000637083 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
CLN8-212ENST00000637083 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.3
CLN8-212ENST00000637083 LRRIQ3A6PVS8 624 aaPredicted RBP13.2□□□□□ -0.3
CLN8-212ENST00000637083 MAFGO15525 162 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 CLSTN1O94985 981 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 EGFRP00533 1210 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 PLS3P13797 630 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 CXCR5P32302 372 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 EPHB4P54760 987 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 TNNC1P63316 161 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 MYL7Q01449 175 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 RBM46Q8TBY0 533 aaKnown RBP13.2□□□□□ -0.3
CLN8-212ENST00000637083 TEPSINQ96N21 525 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 LRRC1Q9BTT6 524 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 RAVER2Q9HCJ3 691 aaKnown RBP13.2□□□□□ -0.3
CLN8-212ENST00000637083 ZCCHC17Q9NP64 241 aaKnown RBP13.2□□□□□ -0.3
CLN8-212ENST00000637083 COL20A1Q9P218 1284 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 VPS18Q9P253 973 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 ADAM21Q9UKJ8 722 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 EXOC7Q9UPT5 735 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 WDR64B1ANS9 1081 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 MATR3P43243 847 aaKnown RBP eCLIP13.2□□□□□ -0.3
CLN8-212ENST00000637083 RARRES1P49788 294 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 PSMC5P62195 406 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 MAPK7Q13164 816 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 PGM5Q15124 567 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 RNF207Q6ZRF8 634 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 AENQ8WTP8 325 aaKnown RBP13.2□□□□□ -0.3
CLN8-212ENST00000637083 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
CLN8-212ENST00000637083 MAF1Q9H063 256 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 APEX2Q9UBZ4 518 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 HPCAL4Q9UM19 191 aa13.2□□□□□ -0.3
CLN8-212ENST00000637083 F8VZ95 297 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 NFKBIEO00221 500 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 FTCDO95954 541 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 YWHABP31946 246 aaKnown RBP13.19□□□□□ -0.3
CLN8-212ENST00000637083 NNTQ13423 1086 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 ARHGEF16Q5VV41 709 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 NLRX1Q86UT6 975 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLN8-212ENST00000637083 HVCN1Q96D96 273 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 TRERF1Q96PN7 1200 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 PSMB7Q99436 277 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 PACSIN1Q9BY11 444 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 INTS2Q9H0H0 1204 aaKnown RBP13.19□□□□□ -0.3
CLN8-212ENST00000637083 PKD2L1Q9P0L9 805 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 NENFQ9UMX5 172 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 SMCHD1A6NHR9 2005 aa13.19□□□□□ -0.3
CLN8-212ENST00000637083 EVI5O60447 810 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 POLD1P28340 1107 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 SMTNP53814 917 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 OAZ1P54368 228 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 RPS6P62753 249 aaKnown RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 MRPS9P82933 396 aaKnown RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 GTF2BQ00403 316 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 ITGB3BPQ13352 177 aaPredicted RBP13.18□□□□□ -0.3
CLN8-212ENST00000637083 COG2Q14746 738 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 DAW1Q8N136 415 aa13.18□□□□□ -0.3
CLN8-212ENST00000637083 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms