RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 ALPK3Q96L96 1907 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 IGKV6-21A0A0C4DH24 114 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 CSDE1O75534 798 aaKnown RBP11.8□□□□□ -0.52
CLN5-213ENST00000636681 DGAT1O75907 488 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 FAM13AO94988 1023 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 SGPL1O95470 568 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 TFRCP02786 760 aaKnown RBP11.8□□□□□ -0.52
CLN5-213ENST00000636681 GLRA2P23416 452 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 PEX3P56589 373 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 PKN2Q16513 984 aaKnown RBP11.8□□□□□ -0.52
CLN5-213ENST00000636681 ZNF484Q5JVG2 852 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 CNNM4Q6P4Q7 775 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 LINC01465Q8N7H1 131 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 C7orf31Q8N865 590 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 PRPF31Q8WWY3 499 aaKnown RBP11.8□□□□□ -0.52
CLN5-213ENST00000636681 MED15Q96RN5 788 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 TRMT13Q9NUP7 481 aaKnown RBP11.8□□□□□ -0.52
CLN5-213ENST00000636681 EXOC1Q9NV70 894 aa11.8□□□□□ -0.52
CLN5-213ENST00000636681 SLC16A4O15374 487 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 TBCAO75347 108 aaKnown RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 RHOBTB3O94955 611 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 SMC2O95347 1197 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 EDN1P05305 212 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 HOXD13P35453 343 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ARL2P36404 184 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 PRCPP42785 496 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ZNF131P52739 623 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ATN1P54259 1190 aaPredicted RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 NLRP12P59046 1061 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ITGA7Q13683 1181 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 NFRKBQ6P4R8 1299 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 KCTD17Q8N5Z5 321 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 PCSK9Q8NBP7 692 aaKnown RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 SLC7A3Q8WY07 619 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 GSDMAQ96QA5 445 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 OSBPL7Q9BZF2 842 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 CRISPLD2Q9H0B8 497 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 CDHR5Q9HBB8 845 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 GTF2IRD1Q9UHL9 959 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 HOOK1Q9UJC3 728 aaKnown RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 SCN5AQ14524 2016 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 PVALEFA0A1B0GWK0 134 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 C17orf102A2RUQ5 167 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 PPP1R3GB7ZBB8 358 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 KBTBD13C9JR72 458 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ZEB2O60315 1214 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 PRPF6O94906 941 aaKnown RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 SRGAP2CP0DJJ0 459 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 CYP2C9P11712 490 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 HOXC8P31273 242 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 NPTX2P47972 431 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 STX17P56962 302 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 CAPSQ13938 189 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 FAM26FQ5R3K3 315 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ODR4Q5SWX8 454 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 SASS6Q6UVJ0 657 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 LRSAM1Q6UWE0 723 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 RHPN2Q8IUC4 686 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 NELFCDQ8IXH7 590 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 CCDC65Q8IXS2 484 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 KIAA0319LQ8IZA0 1049 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 ARRDC4Q8NCT1 418 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 DNAJB3Q8WWF6 145 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 SENP6Q9GZR1 1112 aaPredicted RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 TRPV6Q9H1D0 765 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 PARVGQ9HBI0 331 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 SUCLA2Q9P2R7 463 aaPredicted RBP11.79□□□□□ -0.52
CLN5-213ENST00000636681 PHF24Q9UPV7 400 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 NRCAMQ92823 1304 aa11.79□□□□□ -0.52
CLN5-213ENST00000636681 COL1A2P08123 1366 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 MBLAC1A4D2B0 266 aaPredicted RBP11.78□□□□□ -0.52
CLN5-213ENST00000636681 TRIM49BA6NDI0 452 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 TTLL13PA6NNM8 815 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 CCDC169A6NNP5 214 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 TISP43B9A030 160 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 DNM1LO00429 736 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 KPNA6O60684 536 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 RFC5P40937 340 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 PMS1P54277 932 aaKnown RBP11.78□□□□□ -0.52
CLN5-213ENST00000636681 ZNF445P59923 1031 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 LAMTOR4Q0VGL1 99 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 KCNB1Q14721 858 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 COL13A1Q5TAT6 717 aaPredicted RBP11.78□□□□□ -0.52
CLN5-213ENST00000636681 TAS1R3Q7RTX0 852 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 GLT1D1Q96MS3 346 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 KATNAL1Q9BW62 490 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 LRRC27Q9C0I9 530 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 MINDY3Q9H8M7 445 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 MRPL44Q9H9J2 332 aaKnown RBP11.78□□□□□ -0.52
CLN5-213ENST00000636681 STARD7Q9NQZ5 370 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 ODF2LQ9ULJ1 636 aa11.78□□□□□ -0.52
CLN5-213ENST00000636681 LAMA2P24043 3122 aaKnown RBP11.78□□□□□ -0.52
CLN5-213ENST00000636681 TET1Q8NFU7 2136 aa11.77□□□□□ -0.52
CLN5-213ENST00000636681 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.52
CLN5-213ENST00000636681 LRRIQ4A6NIV6 560 aa11.77□□□□□ -0.52
CLN5-213ENST00000636681 MYL1P05976 194 aa11.77□□□□□ -0.52
CLN5-213ENST00000636681 PLS3P13797 630 aa11.77□□□□□ -0.52
CLN5-213ENST00000636681 EN2P19622 333 aaPredicted RBP11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms