RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 TMEM119Q4V9L6 283 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 HYIQ5T013 277 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 USP49Q70CQ1 688 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 HERC6Q8IVU3 1022 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 MYLIPQ8WY64 445 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 PLIN2Q99541 437 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 NKX2-4Q9H2Z4 354 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 CCDC39Q9UFE4 941 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 MSRAQ9UJ68 235 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 DBR1Q9UK59 544 aaKnown RBP16.39■□□□□ 0.21
PNKP-221ENST00000627317 DNM3Q9UQ16 869 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 PTPRSQ13332 1948 aa16.39■□□□□ 0.21
PNKP-221ENST00000627317 ARID2Q68CP9 1835 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 A0A087WWV3 80 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 ABHD14A-ACY1A0A1B0GW23 586 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 ZBTB39O15060 712 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 ARHGEF15O94989 841 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 C22orf31O95567 290 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 XRCC6P12956 609 aaKnown RBP eCLIP16.38■□□□□ 0.21
PNKP-221ENST00000627317 PLCG1P19174 1290 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 RFC5P40937 340 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 RARRES1P49788 294 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 AXDND1Q5T1B0 1012 aaPredicted RBP16.38■□□□□ 0.21
PNKP-221ENST00000627317 MTHFD1LQ6UB35 978 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 KCTD17Q8N5Z5 321 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 METTL13Q8N6R0 699 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 DBF4BQ8NFT6 615 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 SLC7A3Q8WY07 619 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 PNMA5Q96PV4 448 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 JPH2Q9BR39 696 aaPredicted RBP16.38■□□□□ 0.21
PNKP-221ENST00000627317 FAM49AQ9H0Q0 323 aaPredicted RBP16.38■□□□□ 0.21
PNKP-221ENST00000627317 FAM13BQ9NYF5 915 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 SIP14410 1827 aa16.38■□□□□ 0.21
PNKP-221ENST00000627317 GBF1Q92538 1859 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 LOXHD1Q8IVV2 1947 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 RPLP2P05387 115 aaKnown RBP16.37■□□□□ 0.21
PNKP-221ENST00000627317 TMOD1P28289 359 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 SHC4Q6S5L8 630 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 TMCO2Q7Z6W1 182 aaPredicted RBP16.37■□□□□ 0.21
PNKP-221ENST00000627317 RSPH3Q86UC2 560 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 EXOC8Q8IYI6 725 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 BHMT2Q9H2M3 363 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 BMP2KQ9NSY1 1161 aaPredicted RBP16.37■□□□□ 0.21
PNKP-221ENST00000627317 PCDHA2Q9Y5H9 948 aa16.37■□□□□ 0.21
PNKP-221ENST00000627317 SMIM35A0A1B0GVV1 85 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 GOLGA6L4A6NEF3 574 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 E9PMD0 336 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 USO1O60763 962 aaKnown RBP16.36■□□□□ 0.21
PNKP-221ENST00000627317 EFCAB14O75071 495 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 EYA4O95677 639 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 SSBP05455 408 aaKnown RBP eCLIP16.36■□□□□ 0.21
PNKP-221ENST00000627317 CA3P07451 260 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 CLCN3P51790 818 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 EMC2Q15006 297 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 RRAGBQ5VZM2 374 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 RESP18Q5W5W9 173 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 CCDC73Q6ZRK6 1079 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 KCNK18Q7Z418 384 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 LRRC71Q8N4P6 559 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 DNAJB3Q8WWF6 145 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 CEP89Q96ST8 783 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 MAP7D2Q96T17 732 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 SUGCTQ9HAC7 445 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 ATP6V0A4Q9HBG4 840 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 REV3LO60673 3130 aa16.36■□□□□ 0.21
PNKP-221ENST00000627317 GAS2O43903 313 aaKnown RBP16.35■□□□□ 0.21
PNKP-221ENST00000627317 MAFO75444 373 aaPredicted RBP16.35■□□□□ 0.21
PNKP-221ENST00000627317 DGAT1O75907 488 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 GJB5O95377 273 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 STAT6P42226 847 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 DNM2P50570 870 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 IKBKEQ14164 716 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 LPIN1Q14693 890 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 ADALQ6DHV7 355 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 EFCAB12Q6NXP0 572 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 PADI6Q6TGC4 694 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.35■□□□□ 0.21
PNKP-221ENST00000627317 PDILTQ8N807 584 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 MTRQ99707 1265 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 DHX33Q9H6R0 707 aaKnown RBP16.35■□□□□ 0.21
PNKP-221ENST00000627317 SLC28A3Q9HAS3 691 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 STK17AQ9UEE5 414 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 AKT3Q9Y243 479 aa16.35■□□□□ 0.21
PNKP-221ENST00000627317 COL4A6Q14031 1691 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.34■□□□□ 0.21
PNKP-221ENST00000627317 LCHNA4D1U4 455 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 M0QZ92 97 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 PLA2G4BP0C869 781 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 FOSL2P15408 326 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 CMA1P23946 247 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 KCNJ6P48051 423 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 MRPS6P82932 125 aaKnown RBP16.34■□□□□ 0.21
PNKP-221ENST00000627317 TAP1Q03518 808 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 ADGRE1Q14246 886 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 FBXO47Q5MNV8 452 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 PPP2R2DQ66LE6 453 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 FSIP1Q8NA03 581 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 SEPT8Q92599 483 aa16.34■□□□□ 0.21
PNKP-221ENST00000627317 RAD54LQ92698 747 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms